RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 BECN1Q14457 450 aa13.93□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 STK26Q9P289 416 aa13.93□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 ATP10AO60312 1499 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 ARHGEF40Q8TER5 1519 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 SEMA3FQ13275 785 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 TSC1Q92574 1164 aa13.91□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 TIGD1Q96MW7 591 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 RICTORQ6R327 1708 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 MS4A1P11836 297 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 EGFL6Q8IUX8 553 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 NUDCQ9Y266 331 aa13.9□□□□□ -0.18
CCDC144NL-AS1-218ENST00000583962 ERICH4A6NGS2 130 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 GTF2A1P52655 376 aaPredicted RBP13.88□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 IRF6O14896 467 aa13.87□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 GEMIN8Q9NWZ8 242 aaKnown RBP13.87□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 ABCC1P33527 1531 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 MLH3Q9UHC1 1453 aa13.86□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 PTPRMP28827 1452 aa13.85□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 LRRC9Q6ZRR7 1453 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TRAK2O60296 914 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 TERF1P54274 439 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 SYCP2Q9BX26 1530 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 PRDM16Q9HAZ2 1276 aa13.83□□□□□ -0.19
CCDC144NL-AS1-218ENST00000583962 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 ZNF500O60304 480 aaPredicted RBP13.83□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 KIF3AQ9Y496 699 aa13.82□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 KDM5CP41229 1560 aa13.82□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 GGT6Q6P531 493 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 SAMD9LQ8IVG5 1584 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 NBPF1Q3BBV0 1214 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 ANAPC15P60006 121 aa13.8□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 RNF217Q8TC41 542 aa13.8□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 MYCBPQ99417 103 aaPredicted RBP13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 CEBPAP49715 358 aaPredicted RBP13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 ADAMTSL3P82987 1691 aa13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 HMGB1P09429 215 aaKnown RBP13.78□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 DIP2CQ9Y2E4 1556 aa13.77□□□□□ -0.2
CCDC144NL-AS1-218ENST00000583962 CAPN2P17655 700 aa13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 YY1AP1Q9H869 796 aa13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 FAM50AQ14320 339 aaKnown RBP13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 CAMSAP2Q08AD1 1489 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 MYOM3Q5VTT5 1437 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 KIF3BO15066 747 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 PANK3Q9H999 370 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 TDO2P48775 406 aa13.75□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 A2MP01023 1474 aa13.75□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 MCM4P33991 863 aa13.75□□□□□ -0.21
CCDC144NL-AS1-218ENST00000583962 PLIN1O60240 522 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms