RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 PRAM1Q96QH2 718 aa34.91■■■■□ 3.18
MIR3960-201ENST00000583311 SCAF1Q9H7N4 1312 aaKnown RBP34.89■■■■□ 3.18
MIR3960-201ENST00000583311 PLEKHH1Q9ULM0 1364 aa34.88■■■■□ 3.17
MIR3960-201ENST00000583311 PIP4K2BP78356 416 aa34.88■■■■□ 3.17
MIR3960-201ENST00000583311 RALGAPBQ86X10 1494 aa34.86■■■■□ 3.17
MIR3960-201ENST00000583311 SLAIN2Q9P270 581 aa34.85■■■■□ 3.17
MIR3960-201ENST00000583311 ARHGEF28Q8N1W1 1705 aaKnown RBP34.84■■■■□ 3.17
MIR3960-201ENST00000583311 ILDR1Q86SU0 546 aaPredicted RBP34.84■■■■□ 3.17
MIR3960-201ENST00000583311 GPRASP1Q5JY77 1395 aa34.83■■■■□ 3.17
MIR3960-201ENST00000583311 CDC42BPGQ6DT37 1551 aa34.82■■■■□ 3.16
MIR3960-201ENST00000583311 SAFB2Q14151 953 aaKnown RBP eCLIP34.81■■■■□ 3.16
MIR3960-201ENST00000583311 CARD11Q9BXL7 1154 aa34.78■■■■□ 3.16
MIR3960-201ENST00000583311 EIF3AQ14152 1382 aaKnown RBP34.77■■■■□ 3.16
MIR3960-201ENST00000583311 MST1RQ04912 1400 aa34.76■■■■□ 3.16
MIR3960-201ENST00000583311 ADGRB2O60241 1585 aa34.73■■■■□ 3.15
MIR3960-201ENST00000583311 CENPJQ9HC77 1338 aaPredicted RBP34.73■■■■□ 3.15
MIR3960-201ENST00000583311 ROBO1Q9Y6N7 1651 aa34.72■■■■□ 3.15
MIR3960-201ENST00000583311 MINK1Q8N4C8 1332 aaPredicted RBP34.71■■■■□ 3.15
MIR3960-201ENST00000583311 C1orf167Q5SNV9 1468 aa34.69■■■■□ 3.14
MIR3960-201ENST00000583311 FMN2Q9NZ56 1722 aa34.67■■■■□ 3.14
MIR3960-201ENST00000583311 HIRIP3Q9BW71 556 aaPredicted RBP34.66■■■■□ 3.14
MIR3960-201ENST00000583311 WASLO00401 505 aaPredicted RBP34.63■■■■□ 3.13
MIR3960-201ENST00000583311 BRINP3Q76B58 766 aa34.63■■■■□ 3.13
MIR3960-201ENST00000583311 QRICH2Q9H0J4 1663 aa34.63■■■■□ 3.13
MIR3960-201ENST00000583311 NUTM2FA1L443 756 aa34.59■■■■□ 3.13
MIR3960-201ENST00000583311 ANKARQ7Z5J8 1434 aa34.58■■■■□ 3.13
MIR3960-201ENST00000583311 HSPA1LP34931 641 aa34.58■■■■□ 3.13
MIR3960-201ENST00000583311 ESCO1Q5FWF5 840 aa34.57■■■■□ 3.12
MIR3960-201ENST00000583311 TULP4Q9NRJ4 1543 aa34.55■■■■□ 3.12
MIR3960-201ENST00000583311 ORAI2Q96SN7 254 aa34.54■■■■□ 3.12
MIR3960-201ENST00000583311 SBNO2Q9Y2G9 1366 aa34.53■■■■□ 3.12
MIR3960-201ENST00000583311 AHDC1Q5TGY3 1603 aaPredicted RBP34.53■■■■□ 3.12
MIR3960-201ENST00000583311 CDK19Q9BWU1 502 aa34.53■■■■□ 3.12
MIR3960-201ENST00000583311 EVC2Q86UK5 1308 aa34.51■■■■□ 3.11
MIR3960-201ENST00000583311 USP47Q96K76 1375 aa34.5■■■■□ 3.11
MIR3960-201ENST00000583311 PHLPP1O60346 1717 aa34.5■■■■□ 3.11
MIR3960-201ENST00000583311 SLC24A1O60721 1099 aa34.49■■■■□ 3.11
MIR3960-201ENST00000583311 KIF1AQ12756 1690 aa34.49■■■■□ 3.11
MIR3960-201ENST00000583311 NHSL1Q5SYE7 1610 aa34.48■■■■□ 3.11
MIR3960-201ENST00000583311 SRPK2P78362 688 aaKnown RBP34.48■■■■□ 3.11
MIR3960-201ENST00000583311 USP32Q8NFA0 1604 aa34.48■■■■□ 3.11
MIR3960-201ENST00000583311 PHF8Q9UPP1 1060 aa34.46■■■■□ 3.11
MIR3960-201ENST00000583311 RGPD8O14715 1765 aaPredicted RBP34.45■■■■□ 3.11
MIR3960-201ENST00000583311 ST20-MTHFSA0A0A6YYL1 179 aa34.45■■■■□ 3.11
MIR3960-201ENST00000583311 NUDT16Q96DE0 195 aaKnown RBP34.45■■■■□ 3.11
MIR3960-201ENST00000583311 NPHP3Q7Z494 1330 aa34.45■■■■□ 3.11
MIR3960-201ENST00000583311 PRR36Q9H6K5 1346 aa34.44■■■■□ 3.1
MIR3960-201ENST00000583311 ATP7BP35670 1465 aa34.44■■■■□ 3.1
MIR3960-201ENST00000583311 ITSN1Q15811 1721 aa34.44■■■■□ 3.1
MIR3960-201ENST00000583311 CCDC61Q9Y6R9 512 aa34.41■■■■□ 3.1
MIR3960-201ENST00000583311 COL16A1Q07092 1604 aaPredicted RBP34.41■■■■□ 3.1
MIR3960-201ENST00000583311 CABP2Q9NPB3 220 aa34.4■■■■□ 3.1
MIR3960-201ENST00000583311 FOXO3O43524 673 aa34.39■■■■□ 3.1
MIR3960-201ENST00000583311 DDX17Q92841 729 aaKnown RBP34.38■■■■□ 3.09
MIR3960-201ENST00000583311 SOS2Q07890 1332 aaPredicted RBP34.36■■■■□ 3.09
MIR3960-201ENST00000583311 PMFBP1Q8TBY8 1022 aa34.36■■■■□ 3.09
MIR3960-201ENST00000583311 LRRC59Q96AG4 307 aaKnown RBP34.36■■■■□ 3.09
MIR3960-201ENST00000583311 EIF4G2P78344 907 aaKnown RBP eCLIP34.35■■■■□ 3.09
MIR3960-201ENST00000583311 TESK2Q96S53 571 aa34.35■■■■□ 3.09
MIR3960-201ENST00000583311 TOPAZ1Q8N9V7 1692 aa34.35■■■■□ 3.09
MIR3960-201ENST00000583311 ATAD2Q6PL18 1390 aa34.34■■■■□ 3.09
MIR3960-201ENST00000583311 JCADQ9P266 1359 aa34.34■■■■□ 3.09
MIR3960-201ENST00000583311 NGDNQ8NEJ9 315 aaKnown RBP34.32■■■■□ 3.08
MIR3960-201ENST00000583311 PSME1Q06323 249 aa34.31■■■■□ 3.08
MIR3960-201ENST00000583311 PPIP5K1Q6PFW1 1433 aa34.3■■■■□ 3.08
MIR3960-201ENST00000583311 PLEKHG3A1L390 1219 aa34.3■■■■□ 3.08
MIR3960-201ENST00000583311 TMF1P82094 1093 aa34.3■■■■□ 3.08
MIR3960-201ENST00000583311 PUS7Q96PZ0 661 aaKnown RBP34.3■■■■□ 3.08
MIR3960-201ENST00000583311 PXDNQ92626 1479 aa34.3■■■■□ 3.08
MIR3960-201ENST00000583311 KRT28Q7Z3Y7 464 aa34.29■■■■□ 3.08
MIR3960-201ENST00000583311 XPCQ01831 940 aaPredicted RBP34.26■■■■□ 3.08
MIR3960-201ENST00000583311 CDCA8Q53HL2 280 aa34.25■■■■□ 3.07
MIR3960-201ENST00000583311 POLR3AO14802 1390 aaPredicted RBP34.24■■■■□ 3.07
MIR3960-201ENST00000583311 SHPRHQ149N8 1683 aa34.24■■■■□ 3.07
MIR3960-201ENST00000583311 HSPA5P11021 654 aaKnown RBP34.23■■■■□ 3.07
MIR3960-201ENST00000583311 CABP1Q9NZU7 370 aa34.23■■■■□ 3.07
MIR3960-201ENST00000583311 ACEP12821 1306 aa34.23■■■■□ 3.07
MIR3960-201ENST00000583311 SBNO1A3KN83 1393 aa34.23■■■■□ 3.07
MIR3960-201ENST00000583311 SPATA31A6Q5VVP1 1343 aa34.2■■■■□ 3.07
MIR3960-201ENST00000583311 SPATA31A3Q5VYP0 1347 aa34.18■■■■□ 3.06
MIR3960-201ENST00000583311 PNPLA6Q8IY17 1366 aa34.18■■■■□ 3.06
MIR3960-201ENST00000583311 DISP3Q9P2K9 1392 aa34.18■■■■□ 3.06
MIR3960-201ENST00000583311 TNS3Q68CZ2 1445 aa34.17■■■■□ 3.06
MIR3960-201ENST00000583311 NINLQ9Y2I6 1382 aa34.15■■■■□ 3.06
MIR3960-201ENST00000583311 ZEB1P37275 1124 aaPredicted RBP34.14■■■■□ 3.06
MIR3960-201ENST00000583311 TMC1Q8TDI8 760 aa34.14■■■■□ 3.06
MIR3960-201ENST00000583311 ARHGEF10O15013 1369 aa34.13■■■■□ 3.05
MIR3960-201ENST00000583311 BRD4O60885 1362 aaPredicted RBP34.13■■■■□ 3.05
MIR3960-201ENST00000583311 ZNF692Q9BU19 519 aaPredicted RBP34.13■■■■□ 3.05
MIR3960-201ENST00000583311 TRPM3Q9HCF6 1732 aaPredicted RBP34.13■■■■□ 3.05
MIR3960-201ENST00000583311 PAK3O75914 559 aaPredicted RBP34.11■■■■□ 3.05
MIR3960-201ENST00000583311 LMOD2Q6P5Q4 547 aa34.1■■■■□ 3.05
MIR3960-201ENST00000583311 COL22A1Q8NFW1 1626 aaPredicted RBP34.1■■■■□ 3.05
MIR3960-201ENST00000583311 USP6P35125 1406 aa34.08■■■■□ 3.05
MIR3960-201ENST00000583311 HDGFL2Q7Z4V5 671 aaPredicted RBP34.08■■■■□ 3.05
MIR3960-201ENST00000583311 TERF2IPQ9NYB0 399 aa34.07■■■■□ 3.04
MIR3960-201ENST00000583311 MED1Q15648 1581 aaPredicted RBP34.06■■■■□ 3.04
MIR3960-201ENST00000583311 CPSF1Q10570 1443 aaKnown RBP34.06■■■■□ 3.04
MIR3960-201ENST00000583311 SLC12A5Q9H2X9 1139 aa34.06■■■■□ 3.04
MIR3960-201ENST00000583311 AKAP12Q02952 1782 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms