RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
RFFL-210ENST00000582308 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
RFFL-210ENST00000582308 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
RFFL-210ENST00000582308 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
RFFL-210ENST00000582308 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
RFFL-210ENST00000582308 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
RFFL-210ENST00000582308 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
RFFL-210ENST00000582308 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
RFFL-210ENST00000582308 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
RFFL-210ENST00000582308 ADGRB2O60241 1585 aa13.35□□□□□ -0.27
RFFL-210ENST00000582308 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
RFFL-210ENST00000582308 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
RFFL-210ENST00000582308 RGPD8O14715 1765 aaPredicted RBP13.33□□□□□ -0.28
RFFL-210ENST00000582308 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
RFFL-210ENST00000582308 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
RFFL-210ENST00000582308 TMF1P82094 1093 aa13.33□□□□□ -0.28
RFFL-210ENST00000582308 WASLO00401 505 aaPredicted RBP13.32□□□□□ -0.28
RFFL-210ENST00000582308 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
RFFL-210ENST00000582308 CDK19Q9BWU1 502 aa13.32□□□□□ -0.28
RFFL-210ENST00000582308 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
RFFL-210ENST00000582308 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
RFFL-210ENST00000582308 C19orf44Q9H6X5 657 aa13.31□□□□□ -0.28
RFFL-210ENST00000582308 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
RFFL-210ENST00000582308 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
RFFL-210ENST00000582308 WASHC2AQ641Q2 1341 aa13.31□□□□□ -0.28
RFFL-210ENST00000582308 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
RFFL-210ENST00000582308 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
RFFL-210ENST00000582308 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
RFFL-210ENST00000582308 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
RFFL-210ENST00000582308 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
RFFL-210ENST00000582308 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
RFFL-210ENST00000582308 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
RFFL-210ENST00000582308 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
RFFL-210ENST00000582308 PRR36Q9H6K5 1346 aa13.27□□□□□ -0.29
RFFL-210ENST00000582308 MSH6P52701 1360 aa13.27□□□□□ -0.29
RFFL-210ENST00000582308 MYOM1P52179 1685 aa13.27□□□□□ -0.29
RFFL-210ENST00000582308 ATP7BP35670 1465 aa13.26□□□□□ -0.29
RFFL-210ENST00000582308 DCCP43146 1447 aa13.26□□□□□ -0.29
RFFL-210ENST00000582308 NUDT16Q96DE0 195 aaKnown RBP13.26□□□□□ -0.29
RFFL-210ENST00000582308 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RFFL-210ENST00000582308 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
RFFL-210ENST00000582308 ATF3P18847 181 aa13.25□□□□□ -0.29
RFFL-210ENST00000582308 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
RFFL-210ENST00000582308 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
RFFL-210ENST00000582308 MST1RQ04912 1400 aa13.23□□□□□ -0.29
RFFL-210ENST00000582308 ANKARQ7Z5J8 1434 aa13.23□□□□□ -0.29
RFFL-210ENST00000582308 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
RFFL-210ENST00000582308 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
RFFL-210ENST00000582308 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
RFFL-210ENST00000582308 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
RFFL-210ENST00000582308 CABP1Q9NZU7 370 aa13.22□□□□□ -0.29
RFFL-210ENST00000582308 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
RFFL-210ENST00000582308 CERKQ8TCT0 537 aa13.21□□□□□ -0.29
RFFL-210ENST00000582308 AKAP12Q02952 1782 aa13.21□□□□□ -0.29
RFFL-210ENST00000582308 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
RFFL-210ENST00000582308 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
RFFL-210ENST00000582308 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
RFFL-210ENST00000582308 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
RFFL-210ENST00000582308 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
RFFL-210ENST00000582308 PLEKHG3A1L390 1219 aa13.19□□□□□ -0.3
RFFL-210ENST00000582308 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
RFFL-210ENST00000582308 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
RFFL-210ENST00000582308 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
RFFL-210ENST00000582308 PANK3Q9H999 370 aa13.18□□□□□ -0.3
RFFL-210ENST00000582308 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
RFFL-210ENST00000582308 MON2Q7Z3U7 1717 aa13.17□□□□□ -0.3
RFFL-210ENST00000582308 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
RFFL-210ENST00000582308 ACEP12821 1306 aa13.16□□□□□ -0.3
RFFL-210ENST00000582308 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
RFFL-210ENST00000582308 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
RFFL-210ENST00000582308 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
RFFL-210ENST00000582308 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
RFFL-210ENST00000582308 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
RFFL-210ENST00000582308 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
RFFL-210ENST00000582308 A0A1W2PP64 1363 aa13.15□□□□□ -0.3
RFFL-210ENST00000582308 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
RFFL-210ENST00000582308 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
RFFL-210ENST00000582308 TOM1O60784 492 aa13.14□□□□□ -0.31
RFFL-210ENST00000582308 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
RFFL-210ENST00000582308 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
RFFL-210ENST00000582308 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
RFFL-210ENST00000582308 KTN1Q86UP2 1357 aaKnown RBP13.13□□□□□ -0.31
RFFL-210ENST00000582308 FOXO3O43524 673 aa13.13□□□□□ -0.31
RFFL-210ENST00000582308 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
RFFL-210ENST00000582308 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
RFFL-210ENST00000582308 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
RFFL-210ENST00000582308 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
RFFL-210ENST00000582308 USP6P35125 1406 aa13.12□□□□□ -0.31
RFFL-210ENST00000582308 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
RFFL-210ENST00000582308 PSME1Q06323 249 aa13.11□□□□□ -0.31
RFFL-210ENST00000582308 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
RFFL-210ENST00000582308 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
RFFL-210ENST00000582308 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
RFFL-210ENST00000582308 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
RFFL-210ENST00000582308 KIF20BQ96Q89 1820 aa13.1□□□□□ -0.31
RFFL-210ENST00000582308 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
RFFL-210ENST00000582308 KRT28Q7Z3Y7 464 aa13.09□□□□□ -0.31
RFFL-210ENST00000582308 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
RFFL-210ENST00000582308 PXDNQ92626 1479 aa13.09□□□□□ -0.31
RFFL-210ENST00000582308 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 386.4 ms