RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
NUP85-217ENST00000581335 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
NUP85-217ENST00000581335 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
NUP85-217ENST00000581335 LRP6O75581 1613 aa13.18□□□□□ -0.3
NUP85-217ENST00000581335 MST1RQ04912 1400 aa13.18□□□□□ -0.3
NUP85-217ENST00000581335 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
NUP85-217ENST00000581335 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
NUP85-217ENST00000581335 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
NUP85-217ENST00000581335 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
NUP85-217ENST00000581335 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
NUP85-217ENST00000581335 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
NUP85-217ENST00000581335 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
NUP85-217ENST00000581335 PPLO60437 1756 aa13.16□□□□□ -0.3
NUP85-217ENST00000581335 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
NUP85-217ENST00000581335 ZNF772Q68DY9 489 aaPredicted RBP13.15□□□□□ -0.3
NUP85-217ENST00000581335 DSG3P32926 999 aa13.14□□□□□ -0.31
NUP85-217ENST00000581335 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
NUP85-217ENST00000581335 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
NUP85-217ENST00000581335 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
NUP85-217ENST00000581335 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
NUP85-217ENST00000581335 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NUP85-217ENST00000581335 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
NUP85-217ENST00000581335 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
NUP85-217ENST00000581335 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
NUP85-217ENST00000581335 DDX17Q92841 729 aaKnown RBP13.11□□□□□ -0.31
NUP85-217ENST00000581335 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
NUP85-217ENST00000581335 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
NUP85-217ENST00000581335 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
NUP85-217ENST00000581335 LAMC1P11047 1609 aa13.1□□□□□ -0.31
NUP85-217ENST00000581335 RXRBP28702 533 aa13.09□□□□□ -0.31
NUP85-217ENST00000581335 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.31
NUP85-217ENST00000581335 CCDC144AA2RUR9 1427 aa13.08□□□□□ -0.32
NUP85-217ENST00000581335 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
NUP85-217ENST00000581335 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
NUP85-217ENST00000581335 AFF2P51816 1311 aa13.08□□□□□ -0.32
NUP85-217ENST00000581335 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
NUP85-217ENST00000581335 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
NUP85-217ENST00000581335 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
NUP85-217ENST00000581335 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
NUP85-217ENST00000581335 RGL3Q3MIN7 710 aa13.07□□□□□ -0.32
NUP85-217ENST00000581335 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
NUP85-217ENST00000581335 ADGRF5Q8IZF2 1346 aa13.07□□□□□ -0.32
NUP85-217ENST00000581335 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
NUP85-217ENST00000581335 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
NUP85-217ENST00000581335 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
NUP85-217ENST00000581335 ANKRD30BQ9BXX2 1392 aa13.05□□□□□ -0.32
NUP85-217ENST00000581335 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
NUP85-217ENST00000581335 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUP85-217ENST00000581335 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
NUP85-217ENST00000581335 QTRT2Q9H974 415 aaKnown RBP13.03□□□□□ -0.32
NUP85-217ENST00000581335 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
NUP85-217ENST00000581335 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 STK26Q9P289 416 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
NUP85-217ENST00000581335 TECPR2O15040 1411 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.33
NUP85-217ENST00000581335 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
NUP85-217ENST00000581335 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
NUP85-217ENST00000581335 ABCC11Q96J66 1382 aa13.01□□□□□ -0.33
NUP85-217ENST00000581335 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
NUP85-217ENST00000581335 PIK3C2GO75747 1445 aa13□□□□□ -0.33
NUP85-217ENST00000581335 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
NUP85-217ENST00000581335 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
NUP85-217ENST00000581335 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
NUP85-217ENST00000581335 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
NUP85-217ENST00000581335 FOXO3O43524 673 aa12.98□□□□□ -0.33
NUP85-217ENST00000581335 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
NUP85-217ENST00000581335 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
NUP85-217ENST00000581335 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
NUP85-217ENST00000581335 PXDNQ92626 1479 aa12.97□□□□□ -0.33
NUP85-217ENST00000581335 YTHDC2Q9H6S0 1430 aaKnown RBP12.97□□□□□ -0.33
NUP85-217ENST00000581335 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
NUP85-217ENST00000581335 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
NUP85-217ENST00000581335 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
NUP85-217ENST00000581335 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
NUP85-217ENST00000581335 USP21Q9UK80 565 aa12.97□□□□□ -0.33
NUP85-217ENST00000581335 RGS12O14924 1447 aa12.96□□□□□ -0.33
NUP85-217ENST00000581335 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
NUP85-217ENST00000581335 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
NUP85-217ENST00000581335 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
NUP85-217ENST00000581335 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
NUP85-217ENST00000581335 MYOM2P54296 1465 aa12.95□□□□□ -0.34
NUP85-217ENST00000581335 NRXN1Q9ULB1 1477 aa12.95□□□□□ -0.34
NUP85-217ENST00000581335 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
NUP85-217ENST00000581335 KIF1AQ12756 1690 aa12.94□□□□□ -0.34
NUP85-217ENST00000581335 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
NUP85-217ENST00000581335 RGL2O15211 777 aa12.93□□□□□ -0.34
NUP85-217ENST00000581335 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
NUP85-217ENST00000581335 ATRNO75882 1429 aa12.92□□□□□ -0.34
NUP85-217ENST00000581335 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
NUP85-217ENST00000581335 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
NUP85-217ENST00000581335 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
NUP85-217ENST00000581335 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
NUP85-217ENST00000581335 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
NUP85-217ENST00000581335 PSME1Q06323 249 aa12.89□□□□□ -0.35
NUP85-217ENST00000581335 MIER1Q8N108 512 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms