RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
EIF4A1-216ENST00000580888 POTEAQ6S8J7 498 aa25.15■■□□□ 1.62
EIF4A1-216ENST00000580888 TECPR2O15040 1411 aa25.14■■□□□ 1.62
EIF4A1-216ENST00000580888 PIK3C2GO75747 1445 aa25.14■■□□□ 1.62
EIF4A1-216ENST00000580888 CDC42BPGQ6DT37 1551 aa25.13■■□□□ 1.61
EIF4A1-216ENST00000580888 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
EIF4A1-216ENST00000580888 NRXN1Q9ULB1 1477 aa25.1■■□□□ 1.61
EIF4A1-216ENST00000580888 LRPPRCP42704 1394 aaKnown RBP25.09■■□□□ 1.61
EIF4A1-216ENST00000580888 MYOM2P54296 1465 aa25.09■■□□□ 1.61
EIF4A1-216ENST00000580888 RALGAPBQ86X10 1494 aa25.09■■□□□ 1.61
EIF4A1-216ENST00000580888 EIF4G2P78344 907 aaKnown RBP eCLIP25.08■■□□□ 1.616e-7■□□□□ 9.9
EIF4A1-216ENST00000580888 LRRC59Q96AG4 307 aaKnown RBP25.08■■□□□ 1.61
EIF4A1-216ENST00000580888 ABCC11Q96J66 1382 aa25.07■■□□□ 1.6
EIF4A1-216ENST00000580888 HSPA5P11021 654 aaKnown RBP25.06■■□□□ 1.6
EIF4A1-216ENST00000580888 MIER1Q8N108 512 aa25.05■■□□□ 1.6
EIF4A1-216ENST00000580888 PNPLA6Q8IY17 1366 aa25.04■■□□□ 1.6
EIF4A1-216ENST00000580888 DDX17Q92841 729 aaKnown RBP25.02■■□□□ 1.6
EIF4A1-216ENST00000580888 SOS2Q07890 1332 aaPredicted RBP25.02■■□□□ 1.6
EIF4A1-216ENST00000580888 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
EIF4A1-216ENST00000580888 MEX3CQ5U5Q3 659 aaKnown RBP25.01■■□□□ 1.59
EIF4A1-216ENST00000580888 ZNF772Q68DY9 489 aaPredicted RBP25.01■■□□□ 1.59
EIF4A1-216ENST00000580888 ORAI2Q96SN7 254 aa25.01■■□□□ 1.59
EIF4A1-216ENST00000580888 C14orf93Q9H972 538 aaKnown RBP25.01■■□□□ 1.59
EIF4A1-216ENST00000580888 FMN2Q9NZ56 1722 aa25■■□□□ 1.59
EIF4A1-216ENST00000580888 SIRT1Q96EB6 747 aa25■■□□□ 1.59
EIF4A1-216ENST00000580888 HIRIP3Q9BW71 556 aaPredicted RBP25■■□□□ 1.59
EIF4A1-216ENST00000580888 COL22A1Q8NFW1 1626 aaPredicted RBP24.98■■□□□ 1.59
EIF4A1-216ENST00000580888 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
EIF4A1-216ENST00000580888 DCAF11Q8TEB1 546 aa24.98■■□□□ 1.59
EIF4A1-216ENST00000580888 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
EIF4A1-216ENST00000580888 STK26Q9P289 416 aa24.97■■□□□ 1.59
EIF4A1-216ENST00000580888 TRPM1Q7Z4N2 1603 aa24.97■■□□□ 1.59
EIF4A1-216ENST00000580888 WAPLQ7Z5K2 1190 aa24.96■■□□□ 1.59
EIF4A1-216ENST00000580888 PLEKHH1Q9ULM0 1364 aa24.95■■□□□ 1.59
EIF4A1-216ENST00000580888 NUTM2BA6NNL0 878 aaPredicted RBP24.95■■□□□ 1.58
EIF4A1-216ENST00000580888 NUTM2EB1AL46 878 aaPredicted RBP24.95■■□□□ 1.58
EIF4A1-216ENST00000580888 NUTM2AQ8IVF1 878 aaPredicted RBP24.95■■□□□ 1.58
EIF4A1-216ENST00000580888 GPRASP1Q5JY77 1395 aa24.94■■□□□ 1.58
EIF4A1-216ENST00000580888 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
EIF4A1-216ENST00000580888 PXDNQ92626 1479 aa24.93■■□□□ 1.58
EIF4A1-216ENST00000580888 KIF1AQ12756 1690 aa24.93■■□□□ 1.58
EIF4A1-216ENST00000580888 DDX10Q13206 875 aaKnown RBP24.92■■□□□ 1.58
EIF4A1-216ENST00000580888 NPHP3Q7Z494 1330 aa24.91■■□□□ 1.58
EIF4A1-216ENST00000580888 CFAP70Q5T0N1 1121 aa24.91■■□□□ 1.58
EIF4A1-216ENST00000580888 ADGRB1O14514 1584 aa24.91■■□□□ 1.58
EIF4A1-216ENST00000580888 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
EIF4A1-216ENST00000580888 CDK12Q9NYV4 1490 aaPredicted RBP24.9■■□□□ 1.58
EIF4A1-216ENST00000580888 WASHC2AQ641Q2 1341 aa24.9■■□□□ 1.58
EIF4A1-216ENST00000580888 USP47Q96K76 1375 aa24.9■■□□□ 1.58
EIF4A1-216ENST00000580888 AFF2P51816 1311 aa24.89■■□□□ 1.58
EIF4A1-216ENST00000580888 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.58
EIF4A1-216ENST00000580888 KDM2AQ9Y2K7 1162 aa24.89■■□□□ 1.58
EIF4A1-216ENST00000580888 MARF1Q9Y4F3 1742 aaKnown RBP24.88■■□□□ 1.57
EIF4A1-216ENST00000580888 ADGRB2O60241 1585 aa24.86■■□□□ 1.57
EIF4A1-216ENST00000580888 CCDC7Q96M83 1385 aa24.86■■□□□ 1.57
EIF4A1-216ENST00000580888 C11orf95C9JLR9 678 aaPredicted RBP24.85■■□□□ 1.57
EIF4A1-216ENST00000580888 RXRBP28702 533 aa24.84■■□□□ 1.57
EIF4A1-216ENST00000580888 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
EIF4A1-216ENST00000580888 FOXO3O43524 673 aa24.82■■□□□ 1.56
EIF4A1-216ENST00000580888 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
EIF4A1-216ENST00000580888 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
EIF4A1-216ENST00000580888 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
EIF4A1-216ENST00000580888 USP32Q8NFA0 1604 aa24.79■■□□□ 1.56
EIF4A1-216ENST00000580888 KIAA1210Q9ULL0 1709 aa24.79■■□□□ 1.56
EIF4A1-216ENST00000580888 NUTM2FA1L443 756 aa24.79■■□□□ 1.56
EIF4A1-216ENST00000580888 ADAMTS2O95450 1211 aa24.78■■□□□ 1.56
EIF4A1-216ENST00000580888 ANKARQ7Z5J8 1434 aa24.78■■□□□ 1.56
EIF4A1-216ENST00000580888 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
EIF4A1-216ENST00000580888 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
EIF4A1-216ENST00000580888 RBM6P78332 1123 aaKnown RBP24.76■■□□□ 1.55
EIF4A1-216ENST00000580888 NBPF1Q3BBV0 1214 aa24.76■■□□□ 1.55
EIF4A1-216ENST00000580888 FNBP4Q8N3X1 1017 aaPredicted RBP24.76■■□□□ 1.55
EIF4A1-216ENST00000580888 QTRT2Q9H974 415 aaKnown RBP24.76■■□□□ 1.55
EIF4A1-216ENST00000580888 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
EIF4A1-216ENST00000580888 SPATA31A3Q5VYP0 1347 aa24.75■■□□□ 1.55
EIF4A1-216ENST00000580888 XPCQ01831 940 aaPredicted RBP24.74■■□□□ 1.55
EIF4A1-216ENST00000580888 POGKQ9P215 609 aa24.74■■□□□ 1.55
EIF4A1-216ENST00000580888 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.73■■□□□ 1.55
EIF4A1-216ENST00000580888 RGS12O14924 1447 aa24.73■■□□□ 1.55
EIF4A1-216ENST00000580888 PHF8Q9UPP1 1060 aa24.73■■□□□ 1.55
EIF4A1-216ENST00000580888 SAFB2Q14151 953 aaKnown RBP eCLIP24.71■■□□□ 1.55
EIF4A1-216ENST00000580888 KRT28Q7Z3Y7 464 aa24.71■■□□□ 1.55
EIF4A1-216ENST00000580888 TRAK1Q9UPV9 953 aa24.71■■□□□ 1.55
EIF4A1-216ENST00000580888 ATRNO75882 1429 aa24.7■■□□□ 1.55
EIF4A1-216ENST00000580888 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
EIF4A1-216ENST00000580888 USP21Q9UK80 565 aa24.7■■□□□ 1.54
EIF4A1-216ENST00000580888 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 SBNO1A3KN83 1393 aa24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 EIF3AQ14152 1382 aaKnown RBP24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 TRPC5Q9UL62 973 aaPredicted RBP24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
EIF4A1-216ENST00000580888 CCER2I3L3R5 266 aa24.68■■□□□ 1.54
EIF4A1-216ENST00000580888 TRPM3Q9HCF6 1732 aaPredicted RBP24.68■■□□□ 1.54
EIF4A1-216ENST00000580888 BCL9LQ86UU0 1499 aa24.68■■□□□ 1.54
EIF4A1-216ENST00000580888 PSME1Q06323 249 aa24.67■■□□□ 1.54
EIF4A1-216ENST00000580888 ANP32CO43423 234 aa24.66■■□□□ 1.54
EIF4A1-216ENST00000580888 ITSN1Q15811 1721 aa24.66■■□□□ 1.54
EIF4A1-216ENST00000580888 ALS2Q96Q42 1657 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms