RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 NUTM2EB1AL46 878 aaPredicted RBP31.33■■■□□ 2.61
CSNK1D-215ENST00000580784 NUTM2AQ8IVF1 878 aaPredicted RBP31.33■■■□□ 2.61
CSNK1D-215ENST00000580784 NRXN1Q9ULB1 1477 aa31.33■■■□□ 2.61
CSNK1D-215ENST00000580784 CFAP70Q5T0N1 1121 aa31.32■■■□□ 2.6
CSNK1D-215ENST00000580784 MYOM2P54296 1465 aa31.32■■■□□ 2.6
CSNK1D-215ENST00000580784 KNDC1Q76NI1 1749 aa31.32■■■□□ 2.6
CSNK1D-215ENST00000580784 YTHDC2Q9H6S0 1430 aaKnown RBP31.32■■■□□ 2.6
CSNK1D-215ENST00000580784 PLEKHH1Q9ULM0 1364 aa31.3■■■□□ 2.6
CSNK1D-215ENST00000580784 CDC42BPGQ6DT37 1551 aa31.3■■■□□ 2.6
CSNK1D-215ENST00000580784 LAMC1P11047 1609 aa31.28■■■□□ 2.6
CSNK1D-215ENST00000580784 ESCO1Q5FWF5 840 aa31.25■■■□□ 2.59
CSNK1D-215ENST00000580784 PNPLA6Q8IY17 1366 aa31.25■■■□□ 2.59
CSNK1D-215ENST00000580784 SOS2Q07890 1332 aaPredicted RBP31.24■■■□□ 2.59
CSNK1D-215ENST00000580784 NUTM2FA1L443 756 aa31.24■■■□□ 2.59
CSNK1D-215ENST00000580784 DHX57Q6P158 1386 aaKnown RBP31.24■■■□□ 2.59
CSNK1D-215ENST00000580784 SIRT1Q96EB6 747 aa31.23■■■□□ 2.59
CSNK1D-215ENST00000580784 KDM2AQ9Y2K7 1162 aa31.22■■■□□ 2.59
CSNK1D-215ENST00000580784 ZNF772Q68DY9 489 aaPredicted RBP31.21■■■□□ 2.59
CSNK1D-215ENST00000580784 DCAF11Q8TEB1 546 aa31.21■■■□□ 2.59
CSNK1D-215ENST00000580784 FMN2Q9NZ56 1722 aa31.17■■■□□ 2.58
CSNK1D-215ENST00000580784 FOXO3O43524 673 aa31.16■■■□□ 2.58
CSNK1D-215ENST00000580784 SAFB2Q14151 953 aaKnown RBP eCLIP31.14■■■□□ 2.58
CSNK1D-215ENST00000580784 PRAM1Q96QH2 718 aa31.14■■■□□ 2.58
CSNK1D-215ENST00000580784 AFF2P51816 1311 aa31.14■■■□□ 2.58
CSNK1D-215ENST00000580784 NPHP3Q7Z494 1330 aa31.14■■■□□ 2.58
CSNK1D-215ENST00000580784 XPCQ01831 940 aaPredicted RBP31.13■■■□□ 2.57
CSNK1D-215ENST00000580784 C8orf37Q96NL8 207 aa31.12■■■□□ 2.57
CSNK1D-215ENST00000580784 ADGRB1O14514 1584 aa31.11■■■□□ 2.57
CSNK1D-215ENST00000580784 RGPD8O14715 1765 aaPredicted RBP31.11■■■□□ 2.57
CSNK1D-215ENST00000580784 PXDNQ92626 1479 aa31.1■■■□□ 2.57
CSNK1D-215ENST00000580784 ADAMTS2O95450 1211 aa31.1■■■□□ 2.57
CSNK1D-215ENST00000580784 STAC3Q96MF2 364 aa31.1■■■□□ 2.57
CSNK1D-215ENST00000580784 POGKQ9P215 609 aa31.09■■■□□ 2.57
CSNK1D-215ENST00000580784 DLC1Q96QB1 1528 aa31.08■■■□□ 2.57
CSNK1D-215ENST00000580784 TRAK1Q9UPV9 953 aa31.08■■■□□ 2.57
CSNK1D-215ENST00000580784 RXRBP28702 533 aa31.05■■■□□ 2.56
CSNK1D-215ENST00000580784 NGLY1Q96IV0 654 aa31.05■■■□□ 2.56
CSNK1D-215ENST00000580784 COL22A1Q8NFW1 1626 aaPredicted RBP31.05■■■□□ 2.56
CSNK1D-215ENST00000580784 KIF1AQ12756 1690 aa31.03■■■□□ 2.56
CSNK1D-215ENST00000580784 QTRT2Q9H974 415 aaKnown RBP31■■■□□ 2.55
CSNK1D-215ENST00000580784 PHF8Q9UPP1 1060 aa31■■■□□ 2.55
CSNK1D-215ENST00000580784 KRT28Q7Z3Y7 464 aa30.99■■■□□ 2.55
CSNK1D-215ENST00000580784 HIRIP3Q9BW71 556 aaPredicted RBP30.98■■■□□ 2.55
CSNK1D-215ENST00000580784 MINK1Q8N4C8 1332 aaPredicted RBP30.97■■■□□ 2.55
CSNK1D-215ENST00000580784 ADGRB2O60241 1585 aa30.96■■■□□ 2.55
CSNK1D-215ENST00000580784 SPATA31A3Q5VYP0 1347 aa30.96■■■□□ 2.55
CSNK1D-215ENST00000580784 USP32Q8NFA0 1604 aa30.95■■■□□ 2.54
CSNK1D-215ENST00000580784 PMFBP1Q8TBY8 1022 aa30.92■■■□□ 2.54
CSNK1D-215ENST00000580784 USP21Q9UK80 565 aa30.92■■■□□ 2.54
CSNK1D-215ENST00000580784 ANKARQ7Z5J8 1434 aa30.91■■■□□ 2.54
CSNK1D-215ENST00000580784 CDK12Q9NYV4 1490 aaPredicted RBP30.91■■■□□ 2.54
CSNK1D-215ENST00000580784 MARF1Q9Y4F3 1742 aaKnown RBP30.91■■■□□ 2.54
CSNK1D-215ENST00000580784 RBM6P78332 1123 aaKnown RBP30.91■■■□□ 2.54
CSNK1D-215ENST00000580784 FNBP4Q8N3X1 1017 aaPredicted RBP30.91■■■□□ 2.54
CSNK1D-215ENST00000580784 ARHGEF28Q8N1W1 1705 aaKnown RBP30.9■■■□□ 2.54
CSNK1D-215ENST00000580784 PSME1Q06323 249 aa30.9■■■□□ 2.54
CSNK1D-215ENST00000580784 WASLO00401 505 aaPredicted RBP30.88■■■□□ 2.53
CSNK1D-215ENST00000580784 PRR36Q9H6K5 1346 aa30.86■■■□□ 2.53
CSNK1D-215ENST00000580784 KIAA1210Q9ULL0 1709 aa30.86■■■□□ 2.53
CSNK1D-215ENST00000580784 TNS3Q68CZ2 1445 aa30.84■■■□□ 2.53
CSNK1D-215ENST00000580784 NBPF1Q3BBV0 1214 aa30.84■■■□□ 2.53
CSNK1D-215ENST00000580784 TRPC5Q9UL62 973 aaPredicted RBP30.84■■■□□ 2.53
CSNK1D-215ENST00000580784 TULP4Q9NRJ4 1543 aa30.83■■■□□ 2.53
CSNK1D-215ENST00000580784 RGS12O14924 1447 aa30.82■■■□□ 2.52
CSNK1D-215ENST00000580784 SBNO1A3KN83 1393 aa30.82■■■□□ 2.52
CSNK1D-215ENST00000580784 EIF3AQ14152 1382 aaKnown RBP30.82■■■□□ 2.52
CSNK1D-215ENST00000580784 PLEKHG5O94827 1062 aa30.82■■■□□ 2.52
CSNK1D-215ENST00000580784 LMOD2Q6P5Q4 547 aa30.82■■■□□ 2.52
CSNK1D-215ENST00000580784 UPF1Q92900 1129 aaKnown RBP eCLIP30.82■■■□□ 2.523e-9■□□□□ 9.3
CSNK1D-215ENST00000580784 CABLES1Q8TDN4 633 aa30.81■■■□□ 2.52
CSNK1D-215ENST00000580784 BCL9LQ86UU0 1499 aa30.81■■■□□ 2.52
CSNK1D-215ENST00000580784 SIN3AQ96ST3 1273 aa30.8■■■□□ 2.52
CSNK1D-215ENST00000580784 ATRNO75882 1429 aa30.79■■■□□ 2.52
CSNK1D-215ENST00000580784 L3MBTL2Q969R5 705 aa30.78■■■□□ 2.52
CSNK1D-215ENST00000580784 HAP1P54257 671 aaPredicted RBP30.77■■■□□ 2.52
CSNK1D-215ENST00000580784 ARHGEF10O15013 1369 aa30.76■■■□□ 2.51
CSNK1D-215ENST00000580784 GPRASP1Q5JY77 1395 aa30.75■■■□□ 2.51
CSNK1D-215ENST00000580784 TRPM3Q9HCF6 1732 aaPredicted RBP30.75■■■□□ 2.51
CSNK1D-215ENST00000580784 NGDNQ8NEJ9 315 aaKnown RBP30.74■■■□□ 2.51
CSNK1D-215ENST00000580784 NUDT16Q96DE0 195 aaKnown RBP30.74■■■□□ 2.51
CSNK1D-215ENST00000580784 CDK19Q9BWU1 502 aa30.74■■■□□ 2.51
CSNK1D-215ENST00000580784 NEUROD1Q13562 356 aa30.73■■■□□ 2.51
CSNK1D-215ENST00000580784 ABCA3Q99758 1704 aa30.72■■■□□ 2.51
CSNK1D-215ENST00000580784 ATP7BP35670 1465 aa30.71■■■□□ 2.51
CSNK1D-215ENST00000580784 SLIT2O94813 1529 aa30.71■■■□□ 2.51
CSNK1D-215ENST00000580784 ITSN1Q15811 1721 aa30.7■■■□□ 2.51
CSNK1D-215ENST00000580784 UNC5CLQ8IV45 518 aa30.7■■■□□ 2.51
CSNK1D-215ENST00000580784 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.7■■■□□ 2.5
CSNK1D-215ENST00000580784 ALS2Q96Q42 1657 aa30.69■■■□□ 2.5
CSNK1D-215ENST00000580784 GJD4Q96KN9 370 aaPredicted RBP30.69■■■□□ 2.5
CSNK1D-215ENST00000580784 PAK3O75914 559 aaPredicted RBP30.66■■■□□ 2.5
CSNK1D-215ENST00000580784 CENPJQ9HC77 1338 aaPredicted RBP30.64■■■□□ 2.5
CSNK1D-215ENST00000580784 PLCH1Q4KWH8 1693 aa30.63■■■□□ 2.49
CSNK1D-215ENST00000580784 FAM83GA6ND36 823 aa30.63■■■□□ 2.49
CSNK1D-215ENST00000580784 CCDC61Q9Y6R9 512 aa30.62■■■□□ 2.49
CSNK1D-215ENST00000580784 TOPAZ1Q8N9V7 1692 aa30.61■■■□□ 2.49
CSNK1D-215ENST00000580784 GLI3P10071 1580 aa30.6■■■□□ 2.49
CSNK1D-215ENST00000580784 TRPM1Q7Z4N2 1603 aa30.6■■■□□ 2.49
CSNK1D-215ENST00000580784 RALGAPBQ86X10 1494 aa30.6■■■□□ 2.49
CSNK1D-215ENST00000580784 NWD2Q9ULI1 1742 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms