RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 C1orf167Q5SNV9 1468 aa14.27□□□□□ -0.12
GGA3-209ENST00000580646 TECPR2O15040 1411 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 SPATA31A6Q5VVP1 1343 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 DDX17Q92841 729 aaKnown RBP14.26□□□□□ -0.13
GGA3-209ENST00000580646 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 NALCNQ8IZF0 1738 aa14.26□□□□□ -0.13
GGA3-209ENST00000580646 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
GGA3-209ENST00000580646 LRRC59Q96AG4 307 aaKnown RBP14.25□□□□□ -0.13
GGA3-209ENST00000580646 TIMELESSQ9UNS1 1208 aa14.25□□□□□ -0.13
GGA3-209ENST00000580646 KDM2AQ9Y2K7 1162 aa14.25□□□□□ -0.13
GGA3-209ENST00000580646 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
GGA3-209ENST00000580646 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
GGA3-209ENST00000580646 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
GGA3-209ENST00000580646 SRCAPQ6ZRS2 3230 aa14.24□□□□□ -0.13
GGA3-209ENST00000580646 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
GGA3-209ENST00000580646 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
GGA3-209ENST00000580646 TRPM1Q7Z4N2 1603 aa14.23□□□□□ -0.13
GGA3-209ENST00000580646 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
GGA3-209ENST00000580646 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
GGA3-209ENST00000580646 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
GGA3-209ENST00000580646 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
GGA3-209ENST00000580646 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.13
GGA3-209ENST00000580646 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.13
GGA3-209ENST00000580646 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.13
GGA3-209ENST00000580646 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.13
GGA3-209ENST00000580646 SOS2Q07890 1332 aaPredicted RBP14.2□□□□□ -0.14
GGA3-209ENST00000580646 UPF1Q92900 1129 aaKnown RBP eCLIP14.2□□□□□ -0.143e-6■■□□□ 13.9
GGA3-209ENST00000580646 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
GGA3-209ENST00000580646 LRP6O75581 1613 aa14.19□□□□□ -0.14
GGA3-209ENST00000580646 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
GGA3-209ENST00000580646 CDC42BPGQ6DT37 1551 aa14.19□□□□□ -0.14
GGA3-209ENST00000580646 POGKQ9P215 609 aa14.19□□□□□ -0.14
GGA3-209ENST00000580646 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
GGA3-209ENST00000580646 DLC1Q96QB1 1528 aa14.18□□□□□ -0.14
GGA3-209ENST00000580646 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
GGA3-209ENST00000580646 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
GGA3-209ENST00000580646 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
GGA3-209ENST00000580646 FOXO3O43524 673 aa14.17□□□□□ -0.14
GGA3-209ENST00000580646 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
GGA3-209ENST00000580646 ZNF772Q68DY9 489 aaPredicted RBP14.16□□□□□ -0.14
GGA3-209ENST00000580646 ARHGEF28Q8N1W1 1705 aaKnown RBP14.15□□□□□ -0.14
GGA3-209ENST00000580646 RALGAPBQ86X10 1494 aa14.14□□□□□ -0.15
GGA3-209ENST00000580646 GPRASP1Q5JY77 1395 aa14.13□□□□□ -0.15
GGA3-209ENST00000580646 XPCQ01831 940 aaPredicted RBP14.13□□□□□ -0.15
GGA3-209ENST00000580646 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
GGA3-209ENST00000580646 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
GGA3-209ENST00000580646 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
GGA3-209ENST00000580646 PHF8Q9UPP1 1060 aa14.11□□□□□ -0.15
GGA3-209ENST00000580646 AFF2P51816 1311 aa14.11□□□□□ -0.15
GGA3-209ENST00000580646 MINK1Q8N4C8 1332 aaPredicted RBP14.11□□□□□ -0.15
GGA3-209ENST00000580646 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
GGA3-209ENST00000580646 KRT28Q7Z3Y7 464 aa14.1□□□□□ -0.15
GGA3-209ENST00000580646 PXDNQ92626 1479 aa14.1□□□□□ -0.15
GGA3-209ENST00000580646 FMN2Q9NZ56 1722 aa14.1□□□□□ -0.15
GGA3-209ENST00000580646 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
GGA3-209ENST00000580646 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
GGA3-209ENST00000580646 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
GGA3-209ENST00000580646 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
GGA3-209ENST00000580646 RXRBP28702 533 aa14.08□□□□□ -0.16
GGA3-209ENST00000580646 NBPF1Q3BBV0 1214 aa14.08□□□□□ -0.16
GGA3-209ENST00000580646 SPATA31A3Q5VYP0 1347 aa14.08□□□□□ -0.16
GGA3-209ENST00000580646 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
GGA3-209ENST00000580646 PSME1Q06323 249 aa14.07□□□□□ -0.16
GGA3-209ENST00000580646 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
GGA3-209ENST00000580646 MYT1Q01538 1121 aa14.06□□□□□ -0.16
GGA3-209ENST00000580646 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
GGA3-209ENST00000580646 QRICH2Q9H0J4 1663 aa14.06□□□□□ -0.16
GGA3-209ENST00000580646 PRR36Q9H6K5 1346 aa14.05□□□□□ -0.16
GGA3-209ENST00000580646 EIF3AQ14152 1382 aaKnown RBP14.05□□□□□ -0.16
GGA3-209ENST00000580646 KIF1AQ12756 1690 aa14.04□□□□□ -0.16
GGA3-209ENST00000580646 FNBP4Q8N3X1 1017 aaPredicted RBP14.04□□□□□ -0.16
GGA3-209ENST00000580646 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
GGA3-209ENST00000580646 USP21Q9UK80 565 aa14.03□□□□□ -0.16
GGA3-209ENST00000580646 SBNO1A3KN83 1393 aa14.03□□□□□ -0.16
GGA3-209ENST00000580646 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
GGA3-209ENST00000580646 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
GGA3-209ENST00000580646 NUDT16Q96DE0 195 aaKnown RBP14.02□□□□□ -0.17
GGA3-209ENST00000580646 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
GGA3-209ENST00000580646 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
GGA3-209ENST00000580646 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
GGA3-209ENST00000580646 NGDNQ8NEJ9 315 aaKnown RBP14.01□□□□□ -0.17
GGA3-209ENST00000580646 CARD11Q9BXL7 1154 aa14.01□□□□□ -0.17
GGA3-209ENST00000580646 RGPD8O14715 1765 aaPredicted RBP14.01□□□□□ -0.17
GGA3-209ENST00000580646 USP32Q8NFA0 1604 aa14.01□□□□□ -0.17
GGA3-209ENST00000580646 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
GGA3-209ENST00000580646 CABLES1Q8TDN4 633 aa14□□□□□ -0.17
GGA3-209ENST00000580646 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
GGA3-209ENST00000580646 ITSN1Q15811 1721 aa13.99□□□□□ -0.17
GGA3-209ENST00000580646 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
GGA3-209ENST00000580646 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
GGA3-209ENST00000580646 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
GGA3-209ENST00000580646 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
GGA3-209ENST00000580646 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
GGA3-209ENST00000580646 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
GGA3-209ENST00000580646 ATP7BP35670 1465 aa13.96□□□□□ -0.17
GGA3-209ENST00000580646 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
GGA3-209ENST00000580646 ATRNO75882 1429 aa13.96□□□□□ -0.18
GGA3-209ENST00000580646 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms