RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FOXD1Q16676 465 aa26.65■■□□□ 1.86
MKS1-209ENST00000580127 USP21Q9UK80 565 aa26.65■■□□□ 1.86
MKS1-209ENST00000580127 ANKRD30BQ9BXX2 1392 aa26.65■■□□□ 1.86
MKS1-209ENST00000580127 LRPPRCP42704 1394 aaKnown RBP26.64■■□□□ 1.86
MKS1-209ENST00000580127 MPHOSPH9Q99550 1183 aa26.64■■□□□ 1.86
MKS1-209ENST00000580127 STK26Q9P289 416 aa26.64■■□□□ 1.86
MKS1-209ENST00000580127 LAMC1P11047 1609 aa26.64■■□□□ 1.85
MKS1-209ENST00000580127 TRPC5Q9UL62 973 aaPredicted RBP26.63■■□□□ 1.85
MKS1-209ENST00000580127 ADGRF5Q8IZF2 1346 aa26.61■■□□□ 1.85
MKS1-209ENST00000580127 FNBP4Q8N3X1 1017 aaPredicted RBP26.59■■□□□ 1.85
MKS1-209ENST00000580127 FOXO3O43524 673 aa26.58■■□□□ 1.85
MKS1-209ENST00000580127 WAPLQ7Z5K2 1190 aa26.57■■□□□ 1.84
MKS1-209ENST00000580127 ABCC11Q96J66 1382 aa26.56■■□□□ 1.84
MKS1-209ENST00000580127 CDC42BPGQ6DT37 1551 aa26.54■■□□□ 1.84
MKS1-209ENST00000580127 TMEM132EQ6IEE7 984 aa26.54■■□□□ 1.84
MKS1-209ENST00000580127 RGS12O14924 1447 aa26.54■■□□□ 1.84
MKS1-209ENST00000580127 ATAD2Q6PL18 1390 aa26.53■■□□□ 1.84
MKS1-209ENST00000580127 NUTM2FA1L443 756 aa26.52■■□□□ 1.84
MKS1-209ENST00000580127 SPATA31E1Q6ZUB1 1445 aa26.52■■□□□ 1.84
MKS1-209ENST00000580127 SIRT1Q96EB6 747 aa26.52■■□□□ 1.84
MKS1-209ENST00000580127 TECPR2O15040 1411 aa26.51■■□□□ 1.83
MKS1-209ENST00000580127 XPCQ01831 940 aaPredicted RBP26.5■■□□□ 1.83
MKS1-209ENST00000580127 COL22A1Q8NFW1 1626 aaPredicted RBP26.49■■□□□ 1.83
MKS1-209ENST00000580127 PSME1Q06323 249 aa26.47■■□□□ 1.83
MKS1-209ENST00000580127 C14orf93Q9H972 538 aaKnown RBP26.47■■□□□ 1.83
MKS1-209ENST00000580127 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
MKS1-209ENST00000580127 PXDNQ92626 1479 aa26.46■■□□□ 1.83
MKS1-209ENST00000580127 KRT28Q7Z3Y7 464 aa26.45■■□□□ 1.82
MKS1-209ENST00000580127 CCDC125Q86Z20 511 aa26.45■■□□□ 1.82
MKS1-209ENST00000580127 YTHDC2Q9H6S0 1430 aaKnown RBP26.45■■□□□ 1.82
MKS1-209ENST00000580127 HAP1P54257 671 aaPredicted RBP26.44■■□□□ 1.82
MKS1-209ENST00000580127 PIK3C2GO75747 1445 aa26.44■■□□□ 1.82
MKS1-209ENST00000580127 ATRNO75882 1429 aa26.44■■□□□ 1.82
MKS1-209ENST00000580127 MYOM2P54296 1465 aa26.43■■□□□ 1.82
MKS1-209ENST00000580127 IFT172Q9UG01 1749 aa26.43■■□□□ 1.82
MKS1-209ENST00000580127 GJD4Q96KN9 370 aaPredicted RBP26.43■■□□□ 1.82
MKS1-209ENST00000580127 SPATA31A3Q5VYP0 1347 aa26.41■■□□□ 1.82
MKS1-209ENST00000580127 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
MKS1-209ENST00000580127 PHF8Q9UPP1 1060 aa26.4■■□□□ 1.82
MKS1-209ENST00000580127 PLEKHH1Q9ULM0 1364 aa26.4■■□□□ 1.82
MKS1-209ENST00000580127 UNC5CLQ8IV45 518 aa26.39■■□□□ 1.82
MKS1-209ENST00000580127 POGKQ9P215 609 aa26.39■■□□□ 1.82
MKS1-209ENST00000580127 MARF1Q9Y4F3 1742 aaKnown RBP26.39■■□□□ 1.81
MKS1-209ENST00000580127 BCL9LQ86UU0 1499 aa26.38■■□□□ 1.81
MKS1-209ENST00000580127 CFAP70Q5T0N1 1121 aa26.38■■□□□ 1.81
MKS1-209ENST00000580127 KIF1AQ12756 1690 aa26.38■■□□□ 1.81
MKS1-209ENST00000580127 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
MKS1-209ENST00000580127 FMN2Q9NZ56 1722 aa26.36■■□□□ 1.81
MKS1-209ENST00000580127 PRAM1Q96QH2 718 aa26.35■■□□□ 1.81
MKS1-209ENST00000580127 LMOD2Q6P5Q4 547 aa26.34■■□□□ 1.81
MKS1-209ENST00000580127 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
MKS1-209ENST00000580127 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
MKS1-209ENST00000580127 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
MKS1-209ENST00000580127 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
MKS1-209ENST00000580127 SBNO1A3KN83 1393 aa26.28■■□□□ 1.8
MKS1-209ENST00000580127 CCDC9Q9Y3X0 531 aaKnown RBP26.27■■□□□ 1.8
MKS1-209ENST00000580127 TNS3Q68CZ2 1445 aa26.27■■□□□ 1.8
MKS1-209ENST00000580127 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
MKS1-209ENST00000580127 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.26■■□□□ 1.79
MKS1-209ENST00000580127 SLIT2O94813 1529 aa26.26■■□□□ 1.79
MKS1-209ENST00000580127 PLEKHG5O94827 1062 aa26.26■■□□□ 1.79
MKS1-209ENST00000580127 SF3B2Q13435 895 aaKnown RBP26.26■■□□□ 1.79
MKS1-209ENST00000580127 VPS72Q15906 364 aa26.25■■□□□ 1.79
MKS1-209ENST00000580127 CABLES1Q8TDN4 633 aa26.25■■□□□ 1.79
MKS1-209ENST00000580127 EIF3AQ14152 1382 aaKnown RBP26.24■■□□□ 1.79
MKS1-209ENST00000580127 PMFBP1Q8TBY8 1022 aa26.24■■□□□ 1.79
MKS1-209ENST00000580127 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
MKS1-209ENST00000580127 TRAK1Q9UPV9 953 aa26.23■■□□□ 1.79
MKS1-209ENST00000580127 RALGAPBQ86X10 1494 aa26.23■■□□□ 1.79
MKS1-209ENST00000580127 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
MKS1-209ENST00000580127 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
MKS1-209ENST00000580127 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
MKS1-209ENST00000580127 DCAF11Q8TEB1 546 aa26.22■■□□□ 1.79
MKS1-209ENST00000580127 DLC1Q96QB1 1528 aa26.21■■□□□ 1.79
MKS1-209ENST00000580127 SEPT12Q8IYM1 358 aa26.21■■□□□ 1.79
MKS1-209ENST00000580127 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
MKS1-209ENST00000580127 ONECUT3O60422 494 aaPredicted RBP26.18■■□□□ 1.78
MKS1-209ENST00000580127 BLMP54132 1417 aaPredicted RBP26.18■■□□□ 1.78
MKS1-209ENST00000580127 HIRIP3Q9BW71 556 aaPredicted RBP26.17■■□□□ 1.78
MKS1-209ENST00000580127 MINK1Q8N4C8 1332 aaPredicted RBP26.16■■□□□ 1.78
MKS1-209ENST00000580127 FAM83GA6ND36 823 aa26.16■■□□□ 1.78
MKS1-209ENST00000580127 HRCP23327 699 aa26.16■■□□□ 1.78
MKS1-209ENST00000580127 NGDNQ8NEJ9 315 aaKnown RBP26.16■■□□□ 1.78
MKS1-209ENST00000580127 A0A0G2JS52 829 aa26.15■■□□□ 1.78
MKS1-209ENST00000580127 WASLO00401 505 aaPredicted RBP26.15■■□□□ 1.78
MKS1-209ENST00000580127 MYT1Q01538 1121 aa26.15■■□□□ 1.78
MKS1-209ENST00000580127 KRT27Q7Z3Y8 459 aa26.15■■□□□ 1.78
MKS1-209ENST00000580127 GLI3P10071 1580 aa26.15■■□□□ 1.78
MKS1-209ENST00000580127 NWD2Q9ULI1 1742 aa26.14■■□□□ 1.78
MKS1-209ENST00000580127 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
MKS1-209ENST00000580127 BTG4Q9NY30 223 aa26.11■■□□□ 1.77
MKS1-209ENST00000580127 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
MKS1-209ENST00000580127 EP400Q96L91 3159 aa26.09■■□□□ 1.77
MKS1-209ENST00000580127 BRWD3Q6RI45 1802 aa26.09■■□□□ 1.77
MKS1-209ENST00000580127 ADGRB1O14514 1584 aa26.08■■□□□ 1.77
MKS1-209ENST00000580127 PLCH1Q4KWH8 1693 aa26.08■■□□□ 1.77
MKS1-209ENST00000580127 TULP4Q9NRJ4 1543 aa26.05■■□□□ 1.76
MKS1-209ENST00000580127 DEFB132Q7Z7B7 95 aa26.05■■□□□ 1.76
MKS1-209ENST00000580127 BAG6P46379 1132 aa26.04■■□□□ 1.76
MKS1-209ENST00000580127 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms