RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
ERBB2-210ENST00000580074 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
ERBB2-210ENST00000580074 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
ERBB2-210ENST00000580074 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
ERBB2-210ENST00000580074 LRP6O75581 1613 aa17.03■□□□□ 0.32
ERBB2-210ENST00000580074 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
ERBB2-210ENST00000580074 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
ERBB2-210ENST00000580074 TMEM132EQ6IEE7 984 aa17.02■□□□□ 0.32
ERBB2-210ENST00000580074 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
ERBB2-210ENST00000580074 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
ERBB2-210ENST00000580074 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
ERBB2-210ENST00000580074 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
ERBB2-210ENST00000580074 NUTM2BA6NNL0 878 aaPredicted RBP17■□□□□ 0.31
ERBB2-210ENST00000580074 NUTM2EB1AL46 878 aaPredicted RBP17■□□□□ 0.31
ERBB2-210ENST00000580074 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
ERBB2-210ENST00000580074 NUTM2AQ8IVF1 878 aaPredicted RBP17■□□□□ 0.31
ERBB2-210ENST00000580074 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-210ENST00000580074 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
ERBB2-210ENST00000580074 ORAI2Q96SN7 254 aa16.99■□□□□ 0.31
ERBB2-210ENST00000580074 POGKQ9P215 609 aa16.99■□□□□ 0.31
ERBB2-210ENST00000580074 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
ERBB2-210ENST00000580074 ADGRB2O60241 1585 aa16.98■□□□□ 0.31
ERBB2-210ENST00000580074 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-210ENST00000580074 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
ERBB2-210ENST00000580074 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
ERBB2-210ENST00000580074 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
ERBB2-210ENST00000580074 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
ERBB2-210ENST00000580074 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.3
ERBB2-210ENST00000580074 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
ERBB2-210ENST00000580074 KIAA1210Q9ULL0 1709 aa16.94■□□□□ 0.3
ERBB2-210ENST00000580074 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
ERBB2-210ENST00000580074 PXDNQ92626 1479 aa16.93■□□□□ 0.3
ERBB2-210ENST00000580074 AFF2P51816 1311 aa16.93■□□□□ 0.3
ERBB2-210ENST00000580074 CDK12Q9NYV4 1490 aaPredicted RBP16.93■□□□□ 0.3
ERBB2-210ENST00000580074 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
ERBB2-210ENST00000580074 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
ERBB2-210ENST00000580074 FOXO3O43524 673 aa16.91■□□□□ 0.3
ERBB2-210ENST00000580074 RXRBP28702 533 aa16.9■□□□□ 0.3
ERBB2-210ENST00000580074 PSME1Q06323 249 aa16.9■□□□□ 0.3
ERBB2-210ENST00000580074 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-210ENST00000580074 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
ERBB2-210ENST00000580074 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
ERBB2-210ENST00000580074 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
ERBB2-210ENST00000580074 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
ERBB2-210ENST00000580074 ARHGEF28Q8N1W1 1705 aaKnown RBP16.89■□□□□ 0.29
ERBB2-210ENST00000580074 TULP4Q9NRJ4 1543 aa16.88■□□□□ 0.29
ERBB2-210ENST00000580074 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
ERBB2-210ENST00000580074 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
ERBB2-210ENST00000580074 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
ERBB2-210ENST00000580074 ARHGEF10O15013 1369 aa16.87■□□□□ 0.29
ERBB2-210ENST00000580074 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
ERBB2-210ENST00000580074 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
ERBB2-210ENST00000580074 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
ERBB2-210ENST00000580074 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
ERBB2-210ENST00000580074 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-210ENST00000580074 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
ERBB2-210ENST00000580074 SPATA31A3Q5VYP0 1347 aa16.85■□□□□ 0.29
ERBB2-210ENST00000580074 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-210ENST00000580074 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
ERBB2-210ENST00000580074 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
ERBB2-210ENST00000580074 USP21Q9UK80 565 aa16.83■□□□□ 0.28
ERBB2-210ENST00000580074 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-210ENST00000580074 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
ERBB2-210ENST00000580074 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
ERBB2-210ENST00000580074 QTRT2Q9H974 415 aaKnown RBP16.82■□□□□ 0.28
ERBB2-210ENST00000580074 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
ERBB2-210ENST00000580074 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
ERBB2-210ENST00000580074 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
ERBB2-210ENST00000580074 LMOD2Q6P5Q4 547 aa16.79■□□□□ 0.28
ERBB2-210ENST00000580074 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
ERBB2-210ENST00000580074 ABCA3Q99758 1704 aa16.77■□□□□ 0.28
ERBB2-210ENST00000580074 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
ERBB2-210ENST00000580074 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
ERBB2-210ENST00000580074 ATP7BP35670 1465 aa16.77■□□□□ 0.28
ERBB2-210ENST00000580074 RGS12O14924 1447 aa16.77■□□□□ 0.27
ERBB2-210ENST00000580074 ATRNO75882 1429 aa16.77■□□□□ 0.27
ERBB2-210ENST00000580074 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
ERBB2-210ENST00000580074 CENPJQ9HC77 1338 aaPredicted RBP16.75■□□□□ 0.27
ERBB2-210ENST00000580074 NWD2Q9ULI1 1742 aa16.75■□□□□ 0.27
ERBB2-210ENST00000580074 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
ERBB2-210ENST00000580074 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
ERBB2-210ENST00000580074 QRICH2Q9H0J4 1663 aa16.74■□□□□ 0.27
ERBB2-210ENST00000580074 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
ERBB2-210ENST00000580074 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
ERBB2-210ENST00000580074 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
ERBB2-210ENST00000580074 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
ERBB2-210ENST00000580074 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
ERBB2-210ENST00000580074 SLIT2O94813 1529 aa16.73■□□□□ 0.27
ERBB2-210ENST00000580074 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
ERBB2-210ENST00000580074 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
ERBB2-210ENST00000580074 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
ERBB2-210ENST00000580074 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
ERBB2-210ENST00000580074 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
ERBB2-210ENST00000580074 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
ERBB2-210ENST00000580074 BCL9LQ86UU0 1499 aa16.71■□□□□ 0.27
ERBB2-210ENST00000580074 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-210ENST00000580074 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
ERBB2-210ENST00000580074 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
ERBB2-210ENST00000580074 NBPF1Q3BBV0 1214 aa16.69■□□□□ 0.26
ERBB2-210ENST00000580074 UPF1Q92900 1129 aaKnown RBP eCLIP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms