RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 POGKQ9P215 609 aa32.36■■■□□ 2.77
NDEL1-207ENST00000580012 TOM1O60784 492 aa32.35■■■□□ 2.77
NDEL1-207ENST00000580012 CARD11Q9BXL7 1154 aa32.35■■■□□ 2.77
NDEL1-207ENST00000580012 CADPS2Q86UW7 1296 aa32.33■■■□□ 2.77
NDEL1-207ENST00000580012 DCCP43146 1447 aa32.32■■■□□ 2.76
NDEL1-207ENST00000580012 ATF3P18847 181 aa32.3■■■□□ 2.76
NDEL1-207ENST00000580012 SAFB2Q14151 953 aaKnown RBP eCLIP32.29■■■□□ 2.76
NDEL1-207ENST00000580012 SCAF1Q9H7N4 1312 aaKnown RBP32.27■■■□□ 2.76
NDEL1-207ENST00000580012 SLAIN2Q9P270 581 aa32.27■■■□□ 2.76
NDEL1-207ENST00000580012 PIP4K2BP78356 416 aa32.26■■■□□ 2.75
NDEL1-207ENST00000580012 CENPJQ9HC77 1338 aaPredicted RBP32.26■■■□□ 2.75
NDEL1-207ENST00000580012 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.25■■■□□ 2.75
NDEL1-207ENST00000580012 MINK1Q8N4C8 1332 aaPredicted RBP32.21■■■□□ 2.75
NDEL1-207ENST00000580012 EIF3AQ14152 1382 aaKnown RBP32.2■■■□□ 2.75
NDEL1-207ENST00000580012 ARHGEF28Q8N1W1 1705 aaKnown RBP32.2■■■□□ 2.75
NDEL1-207ENST00000580012 NALCNQ8IZF0 1738 aa32.19■■■□□ 2.74
NDEL1-207ENST00000580012 MST1RQ04912 1400 aa32.18■■■□□ 2.74
NDEL1-207ENST00000580012 HSPA1LP34931 641 aa32.18■■■□□ 2.74
NDEL1-207ENST00000580012 HIRIP3Q9BW71 556 aaPredicted RBP32.18■■■□□ 2.74
NDEL1-207ENST00000580012 WASLO00401 505 aaPredicted RBP32.17■■■□□ 2.74
NDEL1-207ENST00000580012 SOCS7O14512 581 aa32.17■■■□□ 2.74
NDEL1-207ENST00000580012 CDC42BPGQ6DT37 1551 aa32.16■■■□□ 2.74
NDEL1-207ENST00000580012 C1orf167Q5SNV9 1468 aa32.13■■■□□ 2.73
NDEL1-207ENST00000580012 ADGRB2O60241 1585 aa32.12■■■□□ 2.73
NDEL1-207ENST00000580012 SBNO2Q9Y2G9 1366 aa32.12■■■□□ 2.73
NDEL1-207ENST00000580012 ST20-MTHFSA0A0A6YYL1 179 aa32.12■■■□□ 2.73
NDEL1-207ENST00000580012 USP47Q96K76 1375 aa32.11■■■□□ 2.73
NDEL1-207ENST00000580012 TESK2Q96S53 571 aa32.1■■■□□ 2.73
NDEL1-207ENST00000580012 CDK19Q9BWU1 502 aa32.1■■■□□ 2.73
NDEL1-207ENST00000580012 BRINP3Q76B58 766 aa32.09■■■□□ 2.73
NDEL1-207ENST00000580012 ORAI2Q96SN7 254 aa32.06■■■□□ 2.72
NDEL1-207ENST00000580012 NUTM2FA1L443 756 aa32.05■■■□□ 2.72
NDEL1-207ENST00000580012 PRR36Q9H6K5 1346 aa32.04■■■□□ 2.72
NDEL1-207ENST00000580012 ANKARQ7Z5J8 1434 aa32.04■■■□□ 2.72
NDEL1-207ENST00000580012 SLC24A1O60721 1099 aa32.03■■■□□ 2.72
NDEL1-207ENST00000580012 EVC2Q86UK5 1308 aa32.02■■■□□ 2.72
NDEL1-207ENST00000580012 EIF4G2P78344 907 aaKnown RBP eCLIP32.01■■■□□ 2.71
NDEL1-207ENST00000580012 ESCO1Q5FWF5 840 aa32.01■■■□□ 2.71
NDEL1-207ENST00000580012 NUDT16Q96DE0 195 aaKnown RBP32.01■■■□□ 2.71
NDEL1-207ENST00000580012 FMN2Q9NZ56 1722 aa32■■■□□ 2.71
NDEL1-207ENST00000580012 MED1Q15648 1581 aaPredicted RBP31.99■■■□□ 2.71
NDEL1-207ENST00000580012 CABP2Q9NPB3 220 aa31.98■■■□□ 2.71
NDEL1-207ENST00000580012 TULP4Q9NRJ4 1543 aa31.98■■■□□ 2.71
NDEL1-207ENST00000580012 QRICH2Q9H0J4 1663 aa31.98■■■□□ 2.71
NDEL1-207ENST00000580012 HSPA5P11021 654 aaKnown RBP31.97■■■□□ 2.71
NDEL1-207ENST00000580012 PUS7Q96PZ0 661 aaKnown RBP31.97■■■□□ 2.71
NDEL1-207ENST00000580012 ZEB1P37275 1124 aaPredicted RBP31.96■■■□□ 2.71
NDEL1-207ENST00000580012 SRPK2P78362 688 aaKnown RBP31.96■■■□□ 2.71
NDEL1-207ENST00000580012 CCDC61Q9Y6R9 512 aa31.96■■■□□ 2.71
NDEL1-207ENST00000580012 PHF8Q9UPP1 1060 aa31.95■■■□□ 2.71
NDEL1-207ENST00000580012 ROBO1Q9Y6N7 1651 aa31.93■■■□□ 2.7
NDEL1-207ENST00000580012 ATP7BP35670 1465 aa31.92■■■□□ 2.7
NDEL1-207ENST00000580012 USP32Q8NFA0 1604 aa31.91■■■□□ 2.7
NDEL1-207ENST00000580012 PLEKHG3A1L390 1219 aa31.91■■■□□ 2.7
NDEL1-207ENST00000580012 FOXO3O43524 673 aa31.89■■■□□ 2.7
NDEL1-207ENST00000580012 TMF1P82094 1093 aa31.89■■■□□ 2.7
NDEL1-207ENST00000580012 DDX17Q92841 729 aaKnown RBP31.88■■■□□ 2.69
NDEL1-207ENST00000580012 SOS2Q07890 1332 aaPredicted RBP31.86■■■□□ 2.69
NDEL1-207ENST00000580012 PMFBP1Q8TBY8 1022 aa31.86■■■□□ 2.69
NDEL1-207ENST00000580012 NPHP3Q7Z494 1330 aa31.85■■■□□ 2.69
NDEL1-207ENST00000580012 AHDC1Q5TGY3 1603 aaPredicted RBP31.85■■■□□ 2.69
NDEL1-207ENST00000580012 ATAD2Q6PL18 1390 aa31.84■■■□□ 2.69
NDEL1-207ENST00000580012 CABP1Q9NZU7 370 aa31.84■■■□□ 2.69
NDEL1-207ENST00000580012 POLR3AO14802 1390 aaPredicted RBP31.81■■■□□ 2.68
NDEL1-207ENST00000580012 CDCA8Q53HL2 280 aa31.8■■■□□ 2.68
NDEL1-207ENST00000580012 PPIP5K1Q6PFW1 1433 aa31.79■■■□□ 2.68
NDEL1-207ENST00000580012 KRT28Q7Z3Y7 464 aa31.79■■■□□ 2.68
NDEL1-207ENST00000580012 NGDNQ8NEJ9 315 aaKnown RBP31.79■■■□□ 2.68
NDEL1-207ENST00000580012 PHF23Q9BUL5 403 aaPredicted RBP31.79■■■□□ 2.68
NDEL1-207ENST00000580012 ACEP12821 1306 aa31.78■■■□□ 2.68
NDEL1-207ENST00000580012 RGPD8O14715 1765 aaPredicted RBP31.77■■■□□ 2.68
NDEL1-207ENST00000580012 PSME1Q06323 249 aa31.77■■■□□ 2.68
NDEL1-207ENST00000580012 LRRC59Q96AG4 307 aaKnown RBP31.77■■■□□ 2.68
NDEL1-207ENST00000580012 NHSL1Q5SYE7 1610 aa31.76■■■□□ 2.67
NDEL1-207ENST00000580012 PXDNQ92626 1479 aa31.76■■■□□ 2.67
NDEL1-207ENST00000580012 KIF1AQ12756 1690 aa31.76■■■□□ 2.67
NDEL1-207ENST00000580012 XPCQ01831 940 aaPredicted RBP31.75■■■□□ 2.67
NDEL1-207ENST00000580012 C11orf95C9JLR9 678 aaPredicted RBP31.74■■■□□ 2.67
NDEL1-207ENST00000580012 SLC12A5Q9H2X9 1139 aa31.74■■■□□ 2.67
NDEL1-207ENST00000580012 TOPAZ1Q8N9V7 1692 aa31.73■■■□□ 2.67
NDEL1-207ENST00000580012 COL16A1Q07092 1604 aaPredicted RBP31.72■■■□□ 2.67
NDEL1-207ENST00000580012 ZNF692Q9BU19 519 aaPredicted RBP31.71■■■□□ 2.67
NDEL1-207ENST00000580012 SBNO1A3KN83 1393 aa31.7■■■□□ 2.67
NDEL1-207ENST00000580012 NINLQ9Y2I6 1382 aa31.69■■■□□ 2.66
NDEL1-207ENST00000580012 TMC1Q8TDI8 760 aa31.69■■■□□ 2.66
NDEL1-207ENST00000580012 SPATA31A3Q5VYP0 1347 aa31.69■■■□□ 2.66
NDEL1-207ENST00000580012 PHLPP1O60346 1717 aa31.69■■■□□ 2.66
NDEL1-207ENST00000580012 JCADQ9P266 1359 aa31.68■■■□□ 2.66
NDEL1-207ENST00000580012 CPSF1Q10570 1443 aaKnown RBP31.68■■■□□ 2.66
NDEL1-207ENST00000580012 ITSN1Q15811 1721 aa31.66■■■□□ 2.66
NDEL1-207ENST00000580012 BRD4O60885 1362 aaPredicted RBP31.65■■■□□ 2.66
NDEL1-207ENST00000580012 CD163L1Q9NR16 1453 aa31.64■■■□□ 2.66
NDEL1-207ENST00000580012 SSH2Q76I76 1423 aa31.63■■■□□ 2.65
NDEL1-207ENST00000580012 PNPLA6Q8IY17 1366 aa31.62■■■□□ 2.65
NDEL1-207ENST00000580012 TERF2IPQ9NYB0 399 aa31.62■■■□□ 2.65
NDEL1-207ENST00000580012 USP6P35125 1406 aa31.61■■■□□ 2.65
NDEL1-207ENST00000580012 TNS3Q68CZ2 1445 aa31.59■■■□□ 2.65
NDEL1-207ENST00000580012 KIF7Q2M1P5 1343 aa31.59■■■□□ 2.65
NDEL1-207ENST00000580012 HDGFL2Q7Z4V5 671 aaPredicted RBP31.59■■■□□ 2.65
NDEL1-207ENST00000580012 KTN1Q86UP2 1357 aaKnown RBP31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms