RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 ORAI2Q96SN7 254 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 LAMC1P11047 1609 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 NHSL1Q5SYE7 1610 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 PLEKHH1Q9ULM0 1364 aa24.79■■□□□ 1.56
CDC42EP4-204ENST00000579611 SOS2Q07890 1332 aaPredicted RBP24.76■■□□□ 1.55
CDC42EP4-204ENST00000579611 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
CDC42EP4-204ENST00000579611 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
CDC42EP4-204ENST00000579611 KDM2AQ9Y2K7 1162 aa24.74■■□□□ 1.55
CDC42EP4-204ENST00000579611 ADGRB1O14514 1584 aa24.74■■□□□ 1.55
CDC42EP4-204ENST00000579611 LRP6O75581 1613 aa24.73■■□□□ 1.55
CDC42EP4-204ENST00000579611 DLC1Q96QB1 1528 aa24.73■■□□□ 1.55
CDC42EP4-204ENST00000579611 PNPLA6Q8IY17 1366 aa24.7■■□□□ 1.55
CDC42EP4-204ENST00000579611 ESCO1Q5FWF5 840 aa24.7■■□□□ 1.54
CDC42EP4-204ENST00000579611 POTEAQ6S8J7 498 aa24.7■■□□□ 1.54
CDC42EP4-204ENST00000579611 PRAM1Q96QH2 718 aa24.7■■□□□ 1.54
CDC42EP4-204ENST00000579611 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
CDC42EP4-204ENST00000579611 MEX3CQ5U5Q3 659 aaKnown RBP24.65■■□□□ 1.54
CDC42EP4-204ENST00000579611 POGKQ9P215 609 aa24.65■■□□□ 1.54
CDC42EP4-204ENST00000579611 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
CDC42EP4-204ENST00000579611 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
CDC42EP4-204ENST00000579611 FOXO3O43524 673 aa24.63■■□□□ 1.53
CDC42EP4-204ENST00000579611 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
CDC42EP4-204ENST00000579611 NUTM2BA6NNL0 878 aaPredicted RBP24.62■■□□□ 1.53
CDC42EP4-204ENST00000579611 NUTM2EB1AL46 878 aaPredicted RBP24.62■■□□□ 1.53
CDC42EP4-204ENST00000579611 NUTM2AQ8IVF1 878 aaPredicted RBP24.62■■□□□ 1.53
CDC42EP4-204ENST00000579611 PXDNQ92626 1479 aa24.62■■□□□ 1.53
CDC42EP4-204ENST00000579611 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
CDC42EP4-204ENST00000579611 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
CDC42EP4-204ENST00000579611 ANKARQ7Z5J8 1434 aa24.58■■□□□ 1.53
CDC42EP4-204ENST00000579611 ADGRB2O60241 1585 aa24.58■■□□□ 1.52
CDC42EP4-204ENST00000579611 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
CDC42EP4-204ENST00000579611 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
CDC42EP4-204ENST00000579611 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
CDC42EP4-204ENST00000579611 WASLO00401 505 aaPredicted RBP24.53■■□□□ 1.52
CDC42EP4-204ENST00000579611 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
CDC42EP4-204ENST00000579611 AFF2P51816 1311 aa24.53■■□□□ 1.52
CDC42EP4-204ENST00000579611 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-204ENST00000579611 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
CDC42EP4-204ENST00000579611 COL22A1Q8NFW1 1626 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-204ENST00000579611 SPATA31A3Q5VYP0 1347 aa24.52■■□□□ 1.52
CDC42EP4-204ENST00000579611 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
CDC42EP4-204ENST00000579611 C8orf37Q96NL8 207 aa24.51■■□□□ 1.51
CDC42EP4-204ENST00000579611 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
CDC42EP4-204ENST00000579611 PSME1Q06323 249 aa24.5■■□□□ 1.51
CDC42EP4-204ENST00000579611 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
CDC42EP4-204ENST00000579611 SIN3AQ96ST3 1273 aa24.5■■□□□ 1.51
CDC42EP4-204ENST00000579611 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
CDC42EP4-204ENST00000579611 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
CDC42EP4-204ENST00000579611 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
CDC42EP4-204ENST00000579611 FNBP4Q8N3X1 1017 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP4-204ENST00000579611 NGLY1Q96IV0 654 aa24.48■■□□□ 1.51
CDC42EP4-204ENST00000579611 SBNO1A3KN83 1393 aa24.47■■□□□ 1.51
CDC42EP4-204ENST00000579611 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
CDC42EP4-204ENST00000579611 RXRBP28702 533 aa24.47■■□□□ 1.51
CDC42EP4-204ENST00000579611 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
CDC42EP4-204ENST00000579611 USP32Q8NFA0 1604 aa24.45■■□□□ 1.5
CDC42EP4-204ENST00000579611 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
CDC42EP4-204ENST00000579611 ARHGEF28Q8N1W1 1705 aaKnown RBP24.44■■□□□ 1.5
CDC42EP4-204ENST00000579611 PMFBP1Q8TBY8 1022 aa24.43■■□□□ 1.5
CDC42EP4-204ENST00000579611 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
CDC42EP4-204ENST00000579611 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
CDC42EP4-204ENST00000579611 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
CDC42EP4-204ENST00000579611 ARHGEF10O15013 1369 aa24.41■■□□□ 1.5
CDC42EP4-204ENST00000579611 RBM6P78332 1123 aaKnown RBP24.4■■□□□ 1.5
CDC42EP4-204ENST00000579611 NUDT16Q96DE0 195 aaKnown RBP24.4■■□□□ 1.5
CDC42EP4-204ENST00000579611 CDK19Q9BWU1 502 aa24.4■■□□□ 1.5
CDC42EP4-204ENST00000579611 RGPD8O14715 1765 aaPredicted RBP24.39■■□□□ 1.5
CDC42EP4-204ENST00000579611 USP21Q9UK80 565 aa24.39■■□□□ 1.49
CDC42EP4-204ENST00000579611 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
CDC42EP4-204ENST00000579611 ATP7BP35670 1465 aa24.38■■□□□ 1.49
CDC42EP4-204ENST00000579611 CENPJQ9HC77 1338 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-204ENST00000579611 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-204ENST00000579611 CCDC61Q9Y6R9 512 aa24.36■■□□□ 1.49
CDC42EP4-204ENST00000579611 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
CDC42EP4-204ENST00000579611 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
CDC42EP4-204ENST00000579611 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
CDC42EP4-204ENST00000579611 ATRNO75882 1429 aa24.33■■□□□ 1.49
CDC42EP4-204ENST00000579611 POLR3AO14802 1390 aaPredicted RBP24.31■■□□□ 1.48
CDC42EP4-204ENST00000579611 SLIT2O94813 1529 aa24.3■■□□□ 1.48
CDC42EP4-204ENST00000579611 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
CDC42EP4-204ENST00000579611 CABLES1Q8TDN4 633 aa24.3■■□□□ 1.48
CDC42EP4-204ENST00000579611 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
CDC42EP4-204ENST00000579611 NBPF8Q3BBV2 869 aa24.29■■□□□ 1.48
CDC42EP4-204ENST00000579611 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
CDC42EP4-204ENST00000579611 TRPM3Q9HCF6 1732 aaPredicted RBP24.28■■□□□ 1.48
CDC42EP4-204ENST00000579611 UNC5CLQ8IV45 518 aa24.28■■□□□ 1.48
CDC42EP4-204ENST00000579611 RGS12O14924 1447 aa24.27■■□□□ 1.48
CDC42EP4-204ENST00000579611 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
CDC42EP4-204ENST00000579611 ACEP12821 1306 aa24.26■■□□□ 1.47
CDC42EP4-204ENST00000579611 MARF1Q9Y4F3 1742 aaKnown RBP24.25■■□□□ 1.47
CDC42EP4-204ENST00000579611 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
CDC42EP4-204ENST00000579611 ITSN1Q15811 1721 aa24.24■■□□□ 1.47
CDC42EP4-204ENST00000579611 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
CDC42EP4-204ENST00000579611 TONSLQ96HA7 1378 aa24.24■■□□□ 1.47
CDC42EP4-204ENST00000579611 ALS2Q96Q42 1657 aa24.24■■□□□ 1.47
CDC42EP4-204ENST00000579611 UPF1Q92900 1129 aaKnown RBP eCLIP24.23■■□□□ 1.47
CDC42EP4-204ENST00000579611 TOPAZ1Q8N9V7 1692 aa24.22■■□□□ 1.47
CDC42EP4-204ENST00000579611 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms