RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 VPS72Q15906 364 aa12.5□□□□□ -0.41
PPP4R1-212ENST00000579415 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
PPP4R1-212ENST00000579415 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
PPP4R1-212ENST00000579415 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
PPP4R1-212ENST00000579415 FOXO3O43524 673 aa12.48□□□□□ -0.41
PPP4R1-212ENST00000579415 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
PPP4R1-212ENST00000579415 NRXN3Q9Y4C0 1643 aa12.48□□□□□ -0.41
PPP4R1-212ENST00000579415 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-212ENST00000579415 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
PPP4R1-212ENST00000579415 PXDNQ92626 1479 aa12.46□□□□□ -0.41
PPP4R1-212ENST00000579415 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
PPP4R1-212ENST00000579415 ADGRL2O95490 1459 aa12.46□□□□□ -0.42
PPP4R1-212ENST00000579415 VPS8Q8N3P4 1428 aa12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-212ENST00000579415 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-212ENST00000579415 DISP2A7MBM2 1401 aa12.43□□□□□ -0.42
PPP4R1-212ENST00000579415 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
PPP4R1-212ENST00000579415 SENP3-EIF4A1A0A087X0R7 540 aa12.42□□□□□ -0.42
PPP4R1-212ENST00000579415 A0A0G2JS52 829 aa12.42□□□□□ -0.42
PPP4R1-212ENST00000579415 MYT1Q01538 1121 aa12.42□□□□□ -0.42
PPP4R1-212ENST00000579415 EZH2Q15910 746 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-212ENST00000579415 CAMKK2Q96RR4 588 aa12.41□□□□□ -0.42
PPP4R1-212ENST00000579415 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
PPP4R1-212ENST00000579415 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
PPP4R1-212ENST00000579415 PRAG1Q86YV5 1406 aa12.4□□□□□ -0.42
PPP4R1-212ENST00000579415 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-212ENST00000579415 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-212ENST00000579415 MARF1Q9Y4F3 1742 aaKnown RBP12.4□□□□□ -0.43
PPP4R1-212ENST00000579415 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-212ENST00000579415 E9PCH4 1651 aa12.38□□□□□ -0.43
PPP4R1-212ENST00000579415 IQGAP3Q86VI3 1631 aa12.38□□□□□ -0.43
PPP4R1-212ENST00000579415 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
PPP4R1-212ENST00000579415 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-212ENST00000579415 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
PPP4R1-212ENST00000579415 C1QTNF8P60827 252 aa12.37□□□□□ -0.43
PPP4R1-212ENST00000579415 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
PPP4R1-212ENST00000579415 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
PPP4R1-212ENST00000579415 NUP155O75694 1391 aa12.36□□□□□ -0.43
PPP4R1-212ENST00000579415 FAM83GA6ND36 823 aa12.36□□□□□ -0.43
PPP4R1-212ENST00000579415 KRT28Q7Z3Y7 464 aa12.36□□□□□ -0.43
PPP4R1-212ENST00000579415 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
PPP4R1-212ENST00000579415 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
PPP4R1-212ENST00000579415 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
PPP4R1-212ENST00000579415 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-212ENST00000579415 KCNQ2O43526 872 aa12.34□□□□□ -0.43
PPP4R1-212ENST00000579415 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
PPP4R1-212ENST00000579415 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
PPP4R1-212ENST00000579415 NBPF14Q5TI25 921 aa12.34□□□□□ -0.43
PPP4R1-212ENST00000579415 CCDC144AA2RUR9 1427 aa12.34□□□□□ -0.43
PPP4R1-212ENST00000579415 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
PPP4R1-212ENST00000579415 TRIM37O94972 964 aa12.33□□□□□ -0.44
PPP4R1-212ENST00000579415 APBA3O96018 575 aa12.33□□□□□ -0.44
PPP4R1-212ENST00000579415 CDC42BPGQ6DT37 1551 aa12.33□□□□□ -0.44
PPP4R1-212ENST00000579415 PSME1Q06323 249 aa12.32□□□□□ -0.44
PPP4R1-212ENST00000579415 APLP2Q06481 763 aa12.32□□□□□ -0.44
PPP4R1-212ENST00000579415 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
PPP4R1-212ENST00000579415 NAIPQ13075 1403 aa12.31□□□□□ -0.44
PPP4R1-212ENST00000579415 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
PPP4R1-212ENST00000579415 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
PPP4R1-212ENST00000579415 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
PPP4R1-212ENST00000579415 UTRNP46939 3433 aa12.3□□□□□ -0.44
PPP4R1-212ENST00000579415 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
PPP4R1-212ENST00000579415 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
PPP4R1-212ENST00000579415 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
PPP4R1-212ENST00000579415 NWD2Q9ULI1 1742 aa12.29□□□□□ -0.44
PPP4R1-212ENST00000579415 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
PPP4R1-212ENST00000579415 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
PPP4R1-212ENST00000579415 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
PPP4R1-212ENST00000579415 WAPLQ7Z5K2 1190 aa12.28□□□□□ -0.44
PPP4R1-212ENST00000579415 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
PPP4R1-212ENST00000579415 ADGRB2O60241 1585 aa12.27□□□□□ -0.44
PPP4R1-212ENST00000579415 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
PPP4R1-212ENST00000579415 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
PPP4R1-212ENST00000579415 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
PPP4R1-212ENST00000579415 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
PPP4R1-212ENST00000579415 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
PPP4R1-212ENST00000579415 STK26Q9P289 416 aa12.24□□□□□ -0.45
PPP4R1-212ENST00000579415 TECPR2O15040 1411 aa12.23□□□□□ -0.45
PPP4R1-212ENST00000579415 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
PPP4R1-212ENST00000579415 PLEKHH1Q9ULM0 1364 aa12.22□□□□□ -0.45
PPP4R1-212ENST00000579415 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
PPP4R1-212ENST00000579415 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
PPP4R1-212ENST00000579415 RRBP1Q9P2E9 1410 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-212ENST00000579415 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
PPP4R1-212ENST00000579415 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
PPP4R1-212ENST00000579415 CLTCL1P53675 1640 aa12.21□□□□□ -0.46
PPP4R1-212ENST00000579415 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
PPP4R1-212ENST00000579415 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
PPP4R1-212ENST00000579415 PTGER2P43116 358 aa12.2□□□□□ -0.46
PPP4R1-212ENST00000579415 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
PPP4R1-212ENST00000579415 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
PPP4R1-212ENST00000579415 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-212ENST00000579415 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
PPP4R1-212ENST00000579415 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
PPP4R1-212ENST00000579415 PRDM11Q9NQV5 511 aa12.18□□□□□ -0.46
PPP4R1-212ENST00000579415 RREB1Q92766 1687 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms