RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 WAPLQ7Z5K2 1190 aa29.96■■■□□ 2.39
LIMD2-206ENST00000578993 YTHDC2Q9H6S0 1430 aaKnown RBP29.96■■■□□ 2.39
LIMD2-206ENST00000578993 C14orf93Q9H972 538 aaKnown RBP29.95■■■□□ 2.39
LIMD2-206ENST00000578993 ORAI2Q96SN7 254 aa29.94■■■□□ 2.38
LIMD2-206ENST00000578993 CFAP70Q5T0N1 1121 aa29.92■■■□□ 2.38
LIMD2-206ENST00000578993 LRRC59Q96AG4 307 aaKnown RBP29.87■■■□□ 2.37
LIMD2-206ENST00000578993 FMN2Q9NZ56 1722 aa29.87■■■□□ 2.37
LIMD2-206ENST00000578993 PNPLA6Q8IY17 1366 aa29.87■■■□□ 2.37
LIMD2-206ENST00000578993 ADGRB1O14514 1584 aa29.85■■■□□ 2.37
LIMD2-206ENST00000578993 SOS2Q07890 1332 aaPredicted RBP29.84■■■□□ 2.37
LIMD2-206ENST00000578993 NUTM2BA6NNL0 878 aaPredicted RBP29.83■■■□□ 2.37
LIMD2-206ENST00000578993 NUTM2EB1AL46 878 aaPredicted RBP29.83■■■□□ 2.37
LIMD2-206ENST00000578993 NUTM2AQ8IVF1 878 aaPredicted RBP29.83■■■□□ 2.37
LIMD2-206ENST00000578993 SIRT1Q96EB6 747 aa29.83■■■□□ 2.37
LIMD2-206ENST00000578993 RGPD8O14715 1765 aaPredicted RBP29.82■■■□□ 2.36
LIMD2-206ENST00000578993 DHX57Q6P158 1386 aaKnown RBP29.82■■■□□ 2.36
LIMD2-206ENST00000578993 MEX3CQ5U5Q3 659 aaKnown RBP29.82■■■□□ 2.36
LIMD2-206ENST00000578993 NUTM2FA1L443 756 aa29.79■■■□□ 2.36
LIMD2-206ENST00000578993 ESCO1Q5FWF5 840 aa29.79■■■□□ 2.36
LIMD2-206ENST00000578993 DCAF11Q8TEB1 546 aa29.79■■■□□ 2.36
LIMD2-206ENST00000578993 KDM2AQ9Y2K7 1162 aa29.79■■■□□ 2.36
LIMD2-206ENST00000578993 DLC1Q96QB1 1528 aa29.78■■■□□ 2.36
LIMD2-206ENST00000578993 PXDNQ92626 1479 aa29.78■■■□□ 2.36
LIMD2-206ENST00000578993 COL22A1Q8NFW1 1626 aaPredicted RBP29.75■■■□□ 2.35
LIMD2-206ENST00000578993 PRAM1Q96QH2 718 aa29.74■■■□□ 2.35
LIMD2-206ENST00000578993 KIF1AQ12756 1690 aa29.72■■■□□ 2.35
LIMD2-206ENST00000578993 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
LIMD2-206ENST00000578993 FOXO3O43524 673 aa29.71■■■□□ 2.35
LIMD2-206ENST00000578993 SAFB2Q14151 953 aaKnown RBP eCLIP29.71■■■□□ 2.35
LIMD2-206ENST00000578993 ZNF772Q68DY9 489 aaPredicted RBP29.71■■■□□ 2.35
LIMD2-206ENST00000578993 USP32Q8NFA0 1604 aa29.7■■■□□ 2.34
LIMD2-206ENST00000578993 AFF2P51816 1311 aa29.7■■■□□ 2.34
LIMD2-206ENST00000578993 XPCQ01831 940 aaPredicted RBP29.69■■■□□ 2.34
LIMD2-206ENST00000578993 ADGRB2O60241 1585 aa29.69■■■□□ 2.34
LIMD2-206ENST00000578993 STAC3Q96MF2 364 aa29.68■■■□□ 2.34
LIMD2-206ENST00000578993 TRAK1Q9UPV9 953 aa29.67■■■□□ 2.34
LIMD2-206ENST00000578993 ARHGEF28Q8N1W1 1705 aaKnown RBP29.66■■■□□ 2.34
LIMD2-206ENST00000578993 C8orf37Q96NL8 207 aa29.66■■■□□ 2.34
LIMD2-206ENST00000578993 POGKQ9P215 609 aa29.64■■■□□ 2.34
LIMD2-206ENST00000578993 MARF1Q9Y4F3 1742 aaKnown RBP29.64■■■□□ 2.34
LIMD2-206ENST00000578993 ADAMTS2O95450 1211 aa29.63■■■□□ 2.33
LIMD2-206ENST00000578993 KIAA1210Q9ULL0 1709 aa29.61■■■□□ 2.33
LIMD2-206ENST00000578993 HIRIP3Q9BW71 556 aaPredicted RBP29.59■■■□□ 2.33
LIMD2-206ENST00000578993 PHF8Q9UPP1 1060 aa29.58■■■□□ 2.33
LIMD2-206ENST00000578993 ANKARQ7Z5J8 1434 aa29.56■■■□□ 2.32
LIMD2-206ENST00000578993 MINK1Q8N4C8 1332 aaPredicted RBP29.56■■■□□ 2.32
LIMD2-206ENST00000578993 RXRBP28702 533 aa29.56■■■□□ 2.32
LIMD2-206ENST00000578993 SPATA31A3Q5VYP0 1347 aa29.55■■■□□ 2.32
LIMD2-206ENST00000578993 KRT28Q7Z3Y7 464 aa29.55■■■□□ 2.32
LIMD2-206ENST00000578993 NGLY1Q96IV0 654 aa29.55■■■□□ 2.32
LIMD2-206ENST00000578993 QTRT2Q9H974 415 aaKnown RBP29.53■■■□□ 2.32
LIMD2-206ENST00000578993 CDK12Q9NYV4 1490 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-206ENST00000578993 PRR36Q9H6K5 1346 aa29.52■■■□□ 2.32
LIMD2-206ENST00000578993 TULP4Q9NRJ4 1543 aa29.52■■■□□ 2.32
LIMD2-206ENST00000578993 TRPM3Q9HCF6 1732 aaPredicted RBP29.51■■■□□ 2.31
LIMD2-206ENST00000578993 TNS3Q68CZ2 1445 aa29.5■■■□□ 2.31
LIMD2-206ENST00000578993 ABCA3Q99758 1704 aa29.49■■■□□ 2.31
LIMD2-206ENST00000578993 NBPF1Q3BBV0 1214 aa29.49■■■□□ 2.31
LIMD2-206ENST00000578993 FNBP4Q8N3X1 1017 aaPredicted RBP29.49■■■□□ 2.31
LIMD2-206ENST00000578993 WASLO00401 505 aaPredicted RBP29.48■■■□□ 2.31
LIMD2-206ENST00000578993 PMFBP1Q8TBY8 1022 aa29.48■■■□□ 2.31
LIMD2-206ENST00000578993 RGS12O14924 1447 aa29.46■■■□□ 2.31
LIMD2-206ENST00000578993 SIN3AQ96ST3 1273 aa29.46■■■□□ 2.31
LIMD2-206ENST00000578993 USP21Q9UK80 565 aa29.46■■■□□ 2.31
LIMD2-206ENST00000578993 SBNO1A3KN83 1393 aa29.46■■■□□ 2.31
LIMD2-206ENST00000578993 BCL9LQ86UU0 1499 aa29.46■■■□□ 2.31
LIMD2-206ENST00000578993 RBM6P78332 1123 aaKnown RBP29.45■■■□□ 2.31
LIMD2-206ENST00000578993 ATRNO75882 1429 aa29.44■■■□□ 2.3
LIMD2-206ENST00000578993 ALS2Q96Q42 1657 aa29.44■■■□□ 2.3
LIMD2-206ENST00000578993 ITSN1Q15811 1721 aa29.43■■■□□ 2.3
LIMD2-206ENST00000578993 PSME1Q06323 249 aa29.43■■■□□ 2.3
LIMD2-206ENST00000578993 L3MBTL2Q969R5 705 aa29.43■■■□□ 2.3
LIMD2-206ENST00000578993 ATP7BP35670 1465 aa29.42■■■□□ 2.3
LIMD2-206ENST00000578993 EIF3AQ14152 1382 aaKnown RBP29.42■■■□□ 2.3
LIMD2-206ENST00000578993 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.42■■■□□ 2.3
LIMD2-206ENST00000578993 CABLES1Q8TDN4 633 aa29.4■■■□□ 2.3
LIMD2-206ENST00000578993 TRPC5Q9UL62 973 aaPredicted RBP29.39■■■□□ 2.3
LIMD2-206ENST00000578993 TOPAZ1Q8N9V7 1692 aa29.39■■■□□ 2.3
LIMD2-206ENST00000578993 UPF1Q92900 1129 aaKnown RBP eCLIP29.38■■■□□ 2.292e-6■■□□□ 12.9
LIMD2-206ENST00000578993 SLIT2O94813 1529 aa29.38■■■□□ 2.29
LIMD2-206ENST00000578993 TRPM1Q7Z4N2 1603 aa29.38■■■□□ 2.29
LIMD2-206ENST00000578993 ARHGEF10O15013 1369 aa29.36■■■□□ 2.29
LIMD2-206ENST00000578993 PLCH1Q4KWH8 1693 aa29.35■■■□□ 2.29
LIMD2-206ENST00000578993 CRYBG1Q9Y4K1 1723 aa29.35■■■□□ 2.29
LIMD2-206ENST00000578993 NUDT16Q96DE0 195 aaKnown RBP29.35■■■□□ 2.29
LIMD2-206ENST00000578993 LMOD2Q6P5Q4 547 aa29.34■■■□□ 2.29
LIMD2-206ENST00000578993 CDK19Q9BWU1 502 aa29.34■■■□□ 2.29
LIMD2-206ENST00000578993 QRICH2Q9H0J4 1663 aa29.34■■■□□ 2.29
LIMD2-206ENST00000578993 PLEKHG5O94827 1062 aa29.33■■■□□ 2.29
LIMD2-206ENST00000578993 NEUROD1Q13562 356 aa29.33■■■□□ 2.29
LIMD2-206ENST00000578993 GPRASP1Q5JY77 1395 aa29.32■■■□□ 2.28
LIMD2-206ENST00000578993 NWD2Q9ULI1 1742 aa29.31■■■□□ 2.28
LIMD2-206ENST00000578993 GLI3P10071 1580 aa29.3■■■□□ 2.28
LIMD2-206ENST00000578993 NGDNQ8NEJ9 315 aaKnown RBP29.29■■■□□ 2.28
LIMD2-206ENST00000578993 UNC5CLQ8IV45 518 aa29.28■■■□□ 2.28
LIMD2-206ENST00000578993 CENPJQ9HC77 1338 aaPredicted RBP29.27■■■□□ 2.28
LIMD2-206ENST00000578993 HAP1P54257 671 aaPredicted RBP29.26■■■□□ 2.27
LIMD2-206ENST00000578993 RALGAPBQ86X10 1494 aa29.25■■■□□ 2.27
LIMD2-206ENST00000578993 GJD4Q96KN9 370 aaPredicted RBP29.25■■■□□ 2.27
LIMD2-206ENST00000578993 POLR3AO14802 1390 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms