RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
SMARCD2-205ENST00000577686 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
SMARCD2-205ENST00000577686 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
SMARCD2-205ENST00000577686 TRPC5Q9UL62 973 aaPredicted RBP21.17■□□□□ 0.98
SMARCD2-205ENST00000577686 RGS12O14924 1447 aa21.17■□□□□ 0.98
SMARCD2-205ENST00000577686 FOXD1Q16676 465 aa21.16■□□□□ 0.98
SMARCD2-205ENST00000577686 USP21Q9UK80 565 aa21.16■□□□□ 0.98
SMARCD2-205ENST00000577686 TECPR2O15040 1411 aa21.14■□□□□ 0.98
SMARCD2-205ENST00000577686 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.98
SMARCD2-205ENST00000577686 RGL3Q3MIN7 710 aa21.14■□□□□ 0.97
SMARCD2-205ENST00000577686 COL22A1Q8NFW1 1626 aaPredicted RBP21.12■□□□□ 0.97
SMARCD2-205ENST00000577686 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
SMARCD2-205ENST00000577686 STK26Q9P289 416 aa21.12■□□□□ 0.97
SMARCD2-205ENST00000577686 FNBP4Q8N3X1 1017 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-205ENST00000577686 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
SMARCD2-205ENST00000577686 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
SMARCD2-205ENST00000577686 ABCC11Q96J66 1382 aa21.1■□□□□ 0.97
SMARCD2-205ENST00000577686 MYOM2P54296 1465 aa21.08■□□□□ 0.97
SMARCD2-205ENST00000577686 PXDNQ92626 1479 aa21.07■□□□□ 0.96
SMARCD2-205ENST00000577686 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
SMARCD2-205ENST00000577686 PIK3C2GO75747 1445 aa21.07■□□□□ 0.96
SMARCD2-205ENST00000577686 FOXO3O43524 673 aa21.07■□□□□ 0.96
SMARCD2-205ENST00000577686 ATRNO75882 1429 aa21.06■□□□□ 0.96
SMARCD2-205ENST00000577686 WAPLQ7Z5K2 1190 aa21.06■□□□□ 0.96
SMARCD2-205ENST00000577686 YTHDC2Q9H6S0 1430 aaKnown RBP21.05■□□□□ 0.96
SMARCD2-205ENST00000577686 IFT172Q9UG01 1749 aa21.05■□□□□ 0.96
SMARCD2-205ENST00000577686 SIRT1Q96EB6 747 aa21.05■□□□□ 0.96
SMARCD2-205ENST00000577686 KIF1AQ12756 1690 aa21.05■□□□□ 0.96
SMARCD2-205ENST00000577686 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
SMARCD2-205ENST00000577686 NUTM2FA1L443 756 aa21.03■□□□□ 0.96
SMARCD2-205ENST00000577686 HAP1P54257 671 aaPredicted RBP21.02■□□□□ 0.96
SMARCD2-205ENST00000577686 XPCQ01831 940 aaPredicted RBP21.02■□□□□ 0.96
SMARCD2-205ENST00000577686 TMEM132EQ6IEE7 984 aa21.02■□□□□ 0.96
SMARCD2-205ENST00000577686 PSME1Q06323 249 aa21.01■□□□□ 0.95
SMARCD2-205ENST00000577686 CCDC125Q86Z20 511 aa21■□□□□ 0.95
SMARCD2-205ENST00000577686 FMN2Q9NZ56 1722 aa21■□□□□ 0.95
SMARCD2-205ENST00000577686 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
SMARCD2-205ENST00000577686 SPATA31A3Q5VYP0 1347 aa20.99■□□□□ 0.95
SMARCD2-205ENST00000577686 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
SMARCD2-205ENST00000577686 KRT28Q7Z3Y7 464 aa20.98■□□□□ 0.95
SMARCD2-205ENST00000577686 BCL9LQ86UU0 1499 aa20.97■□□□□ 0.95
SMARCD2-205ENST00000577686 GJD4Q96KN9 370 aaPredicted RBP20.97■□□□□ 0.95
SMARCD2-205ENST00000577686 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
SMARCD2-205ENST00000577686 MARF1Q9Y4F3 1742 aaKnown RBP20.97■□□□□ 0.95
SMARCD2-205ENST00000577686 UNC5CLQ8IV45 518 aa20.96■□□□□ 0.95
SMARCD2-205ENST00000577686 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
SMARCD2-205ENST00000577686 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 POGKQ9P215 609 aa20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 ZRANB1Q9UGI0 708 aa20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-205ENST00000577686 CFAP70Q5T0N1 1121 aa20.92■□□□□ 0.94
SMARCD2-205ENST00000577686 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
SMARCD2-205ENST00000577686 SBNO1A3KN83 1393 aa20.92■□□□□ 0.94
SMARCD2-205ENST00000577686 SLIT2O94813 1529 aa20.91■□□□□ 0.94
SMARCD2-205ENST00000577686 ANKARQ7Z5J8 1434 aa20.91■□□□□ 0.94
SMARCD2-205ENST00000577686 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
SMARCD2-205ENST00000577686 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
SMARCD2-205ENST00000577686 RALGAPBQ86X10 1494 aa20.89■□□□□ 0.94
SMARCD2-205ENST00000577686 LMOD2Q6P5Q4 547 aa20.89■□□□□ 0.93
SMARCD2-205ENST00000577686 SF3B2Q13435 895 aaKnown RBP20.88■□□□□ 0.93
SMARCD2-205ENST00000577686 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMARCD2-205ENST00000577686 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
SMARCD2-205ENST00000577686 CCDC9Q9Y3X0 531 aaKnown RBP20.86■□□□□ 0.93
SMARCD2-205ENST00000577686 BLMP54132 1417 aaPredicted RBP20.86■□□□□ 0.93
SMARCD2-205ENST00000577686 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
SMARCD2-205ENST00000577686 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
SMARCD2-205ENST00000577686 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
SMARCD2-205ENST00000577686 VPS72Q15906 364 aa20.85■□□□□ 0.93
SMARCD2-205ENST00000577686 GLI3P10071 1580 aa20.83■□□□□ 0.92
SMARCD2-205ENST00000577686 NWD2Q9ULI1 1742 aa20.82■□□□□ 0.92
SMARCD2-205ENST00000577686 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
SMARCD2-205ENST00000577686 SEPT12Q8IYM1 358 aa20.81■□□□□ 0.92
SMARCD2-205ENST00000577686 PMFBP1Q8TBY8 1022 aa20.81■□□□□ 0.92
SMARCD2-205ENST00000577686 CABLES1Q8TDN4 633 aa20.8■□□□□ 0.92
SMARCD2-205ENST00000577686 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
SMARCD2-205ENST00000577686 A0A0G2JS52 829 aa20.79■□□□□ 0.92
SMARCD2-205ENST00000577686 MYT1Q01538 1121 aa20.79■□□□□ 0.92
SMARCD2-205ENST00000577686 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
SMARCD2-205ENST00000577686 PLCH1Q4KWH8 1693 aa20.79■□□□□ 0.92
SMARCD2-205ENST00000577686 TULP4Q9NRJ4 1543 aa20.78■□□□□ 0.92
SMARCD2-205ENST00000577686 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
SMARCD2-205ENST00000577686 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.92
SMARCD2-205ENST00000577686 KDM2AQ9Y2K7 1162 aa20.77■□□□□ 0.92
SMARCD2-205ENST00000577686 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.91
SMARCD2-205ENST00000577686 ABCA3Q99758 1704 aa20.76■□□□□ 0.91
SMARCD2-205ENST00000577686 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
SMARCD2-205ENST00000577686 KRT27Q7Z3Y8 459 aa20.76■□□□□ 0.91
SMARCD2-205ENST00000577686 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-205ENST00000577686 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
SMARCD2-205ENST00000577686 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
SMARCD2-205ENST00000577686 HRCP23327 699 aa20.74■□□□□ 0.91
SMARCD2-205ENST00000577686 FAM83GA6ND36 823 aa20.72■□□□□ 0.91
SMARCD2-205ENST00000577686 PAK3O75914 559 aaPredicted RBP20.72■□□□□ 0.91
SMARCD2-205ENST00000577686 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
SMARCD2-205ENST00000577686 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
SMARCD2-205ENST00000577686 BAG6P46379 1132 aa20.71■□□□□ 0.91
SMARCD2-205ENST00000577686 TRPM3Q9HCF6 1732 aaPredicted RBP20.7■□□□□ 0.9
SMARCD2-205ENST00000577686 PRDM11Q9NQV5 511 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms