RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 RGS12O14924 1447 aa24.18■■□□□ 1.46
TMEM88-202ENST00000574668 LAMC1P11047 1609 aa24.17■■□□□ 1.46
TMEM88-202ENST00000574668 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
TMEM88-202ENST00000574668 PPLO60437 1756 aa24.16■■□□□ 1.46
TMEM88-202ENST00000574668 RGL3Q3MIN7 710 aa24.16■■□□□ 1.46
TMEM88-202ENST00000574668 NGLY1Q96IV0 654 aa24.16■■□□□ 1.46
TMEM88-202ENST00000574668 PRAG1Q86YV5 1406 aa24.16■■□□□ 1.46
TMEM88-202ENST00000574668 RBM6P78332 1123 aaKnown RBP24.15■■□□□ 1.46
TMEM88-202ENST00000574668 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
TMEM88-202ENST00000574668 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
TMEM88-202ENST00000574668 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
TMEM88-202ENST00000574668 SIN3AQ96ST3 1273 aa24.09■■□□□ 1.45
TMEM88-202ENST00000574668 SPATA31E1Q6ZUB1 1445 aa24.09■■□□□ 1.45
TMEM88-202ENST00000574668 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.45
TMEM88-202ENST00000574668 STK26Q9P289 416 aa24.08■■□□□ 1.45
TMEM88-202ENST00000574668 USP21Q9UK80 565 aa24.08■■□□□ 1.45
TMEM88-202ENST00000574668 XPCQ01831 940 aaPredicted RBP24.07■■□□□ 1.44
TMEM88-202ENST00000574668 CDC42BPGQ6DT37 1551 aa24.07■■□□□ 1.44
TMEM88-202ENST00000574668 WAPLQ7Z5K2 1190 aa24.06■■□□□ 1.44
TMEM88-202ENST00000574668 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
TMEM88-202ENST00000574668 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
TMEM88-202ENST00000574668 PXDNQ92626 1479 aa24.04■■□□□ 1.44
TMEM88-202ENST00000574668 FOXO3O43524 673 aa24.03■■□□□ 1.44
TMEM88-202ENST00000574668 TMEM132EQ6IEE7 984 aa24.03■■□□□ 1.44
TMEM88-202ENST00000574668 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
TMEM88-202ENST00000574668 TRPC5Q9UL62 973 aaPredicted RBP24.03■■□□□ 1.44
TMEM88-202ENST00000574668 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
TMEM88-202ENST00000574668 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
TMEM88-202ENST00000574668 MYOM2P54296 1465 aa24.02■■□□□ 1.44
TMEM88-202ENST00000574668 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
TMEM88-202ENST00000574668 LRPPRCP42704 1394 aaKnown RBP24.01■■□□□ 1.43
TMEM88-202ENST00000574668 TECPR2O15040 1411 aa24.01■■□□□ 1.43
TMEM88-202ENST00000574668 ATRNO75882 1429 aa24■■□□□ 1.43
TMEM88-202ENST00000574668 IFT172Q9UG01 1749 aa23.99■■□□□ 1.43
TMEM88-202ENST00000574668 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
TMEM88-202ENST00000574668 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
TMEM88-202ENST00000574668 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
TMEM88-202ENST00000574668 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
TMEM88-202ENST00000574668 PIK3C2GO75747 1445 aa23.96■■□□□ 1.43
TMEM88-202ENST00000574668 ABCC11Q96J66 1382 aa23.96■■□□□ 1.43
TMEM88-202ENST00000574668 STAC3Q96MF2 364 aa23.95■■□□□ 1.42
TMEM88-202ENST00000574668 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
TMEM88-202ENST00000574668 KNDC1Q76NI1 1749 aa23.93■■□□□ 1.42
TMEM88-202ENST00000574668 TONSLQ96HA7 1378 aa23.93■■□□□ 1.42
TMEM88-202ENST00000574668 L3MBTL2Q969R5 705 aa23.92■■□□□ 1.42
TMEM88-202ENST00000574668 FMN2Q9NZ56 1722 aa23.91■■□□□ 1.42
TMEM88-202ENST00000574668 MARF1Q9Y4F3 1742 aaKnown RBP23.91■■□□□ 1.42
TMEM88-202ENST00000574668 SPATA31A3Q5VYP0 1347 aa23.88■■□□□ 1.41
TMEM88-202ENST00000574668 GJD4Q96KN9 370 aaPredicted RBP23.88■■□□□ 1.41
TMEM88-202ENST00000574668 KRT28Q7Z3Y7 464 aa23.87■■□□□ 1.41
TMEM88-202ENST00000574668 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
TMEM88-202ENST00000574668 C14orf93Q9H972 538 aaKnown RBP23.86■■□□□ 1.41
TMEM88-202ENST00000574668 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
TMEM88-202ENST00000574668 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
TMEM88-202ENST00000574668 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
TMEM88-202ENST00000574668 SLIT2O94813 1529 aa23.84■■□□□ 1.41
TMEM88-202ENST00000574668 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.41
TMEM88-202ENST00000574668 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
TMEM88-202ENST00000574668 SIRT1Q96EB6 747 aa23.83■■□□□ 1.41
TMEM88-202ENST00000574668 EP400Q96L91 3159 aa23.83■■□□□ 1.41
TMEM88-202ENST00000574668 RALGAPBQ86X10 1494 aa23.82■■□□□ 1.4
TMEM88-202ENST00000574668 CABLES1Q8TDN4 633 aa23.82■■□□□ 1.4
TMEM88-202ENST00000574668 PHF8Q9UPP1 1060 aa23.82■■□□□ 1.4
TMEM88-202ENST00000574668 GLI3P10071 1580 aa23.82■■□□□ 1.4
TMEM88-202ENST00000574668 RGPD8O14715 1765 aaPredicted RBP23.81■■□□□ 1.4
TMEM88-202ENST00000574668 PRAM1Q96QH2 718 aa23.81■■□□□ 1.4
TMEM88-202ENST00000574668 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.81■■□□□ 1.4
TMEM88-202ENST00000574668 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
TMEM88-202ENST00000574668 TIMELESSQ9UNS1 1208 aa23.8■■□□□ 1.4
TMEM88-202ENST00000574668 SRCAPQ6ZRS2 3230 aa23.8■■□□□ 1.4
TMEM88-202ENST00000574668 TNS3Q68CZ2 1445 aa23.79■■□□□ 1.4
TMEM88-202ENST00000574668 HAP1P54257 671 aaPredicted RBP23.77■■□□□ 1.4
TMEM88-202ENST00000574668 PSME1Q06323 249 aa23.76■■□□□ 1.39
TMEM88-202ENST00000574668 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
TMEM88-202ENST00000574668 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
TMEM88-202ENST00000574668 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
TMEM88-202ENST00000574668 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
TMEM88-202ENST00000574668 POGKQ9P215 609 aa23.73■■□□□ 1.39
TMEM88-202ENST00000574668 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
TMEM88-202ENST00000574668 PLCH1Q4KWH8 1693 aa23.71■■□□□ 1.39
TMEM88-202ENST00000574668 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
TMEM88-202ENST00000574668 SEPT12Q8IYM1 358 aa23.71■■□□□ 1.39
TMEM88-202ENST00000574668 HIRIP3Q9BW71 556 aaPredicted RBP23.71■■□□□ 1.39
TMEM88-202ENST00000574668 ABCA3Q99758 1704 aa23.7■■□□□ 1.39
TMEM88-202ENST00000574668 VPS72Q15906 364 aa23.7■■□□□ 1.38
TMEM88-202ENST00000574668 NBPF8Q3BBV2 869 aa23.7■■□□□ 1.38
TMEM88-202ENST00000574668 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
TMEM88-202ENST00000574668 CCDC9Q9Y3X0 531 aaKnown RBP23.7■■□□□ 1.38
TMEM88-202ENST00000574668 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
TMEM88-202ENST00000574668 ADGRB1O14514 1584 aa23.69■■□□□ 1.38
TMEM88-202ENST00000574668 BLMP54132 1417 aaPredicted RBP23.69■■□□□ 1.38
TMEM88-202ENST00000574668 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
TMEM88-202ENST00000574668 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
TMEM88-202ENST00000574668 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
TMEM88-202ENST00000574668 MINK1Q8N4C8 1332 aaPredicted RBP23.67■■□□□ 1.38
TMEM88-202ENST00000574668 ADGRB2O60241 1585 aa23.67■■□□□ 1.38
TMEM88-202ENST00000574668 DEFB132Q7Z7B7 95 aa23.67■■□□□ 1.38
TMEM88-202ENST00000574668 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
TMEM88-202ENST00000574668 PRR36Q9H6K5 1346 aa23.65■■□□□ 1.38
TMEM88-202ENST00000574668 NWD2Q9ULI1 1742 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms