RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
NDE1-207ENST00000573203 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
NDE1-207ENST00000573203 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
NDE1-207ENST00000573203 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 PRAG1Q86YV5 1406 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 MYOM2P54296 1465 aa13.27□□□□□ -0.29
NDE1-207ENST00000573203 STK26Q9P289 416 aa13.26□□□□□ -0.29
NDE1-207ENST00000573203 LAMC1P11047 1609 aa13.25□□□□□ -0.29
NDE1-207ENST00000573203 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
NDE1-207ENST00000573203 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 MST1RQ04912 1400 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 LRPPRCP42704 1394 aaKnown RBP13.24□□□□□ -0.29
NDE1-207ENST00000573203 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
NDE1-207ENST00000573203 CFAP70Q5T0N1 1121 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
NDE1-207ENST00000573203 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
NDE1-207ENST00000573203 TECPR2O15040 1411 aa13.22□□□□□ -0.29
NDE1-207ENST00000573203 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
NDE1-207ENST00000573203 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
NDE1-207ENST00000573203 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
NDE1-207ENST00000573203 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
NDE1-207ENST00000573203 WAPLQ7Z5K2 1190 aa13.21□□□□□ -0.29
NDE1-207ENST00000573203 JCADQ9P266 1359 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
NDE1-207ENST00000573203 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
NDE1-207ENST00000573203 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
NDE1-207ENST00000573203 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
NDE1-207ENST00000573203 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
NDE1-207ENST00000573203 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
NDE1-207ENST00000573203 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
NDE1-207ENST00000573203 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
NDE1-207ENST00000573203 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
NDE1-207ENST00000573203 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
NDE1-207ENST00000573203 SPATA31A6Q5VVP1 1343 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
NDE1-207ENST00000573203 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 LRRC59Q96AG4 307 aaKnown RBP13.14□□□□□ -0.31
NDE1-207ENST00000573203 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 POGKQ9P215 609 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
NDE1-207ENST00000573203 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
NDE1-207ENST00000573203 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
NDE1-207ENST00000573203 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 SOCS7O14512 581 aa13.11□□□□□ -0.31
NDE1-207ENST00000573203 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
NDE1-207ENST00000573203 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
NDE1-207ENST00000573203 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 LRP6O75581 1613 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 RGPD8O14715 1765 aaPredicted RBP13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
NDE1-207ENST00000573203 SOS2Q07890 1332 aaPredicted RBP13.1□□□□□ -0.31
NDE1-207ENST00000573203 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 FOXO3O43524 673 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
NDE1-207ENST00000573203 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
NDE1-207ENST00000573203 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
NDE1-207ENST00000573203 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
NDE1-207ENST00000573203 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
NDE1-207ENST00000573203 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
NDE1-207ENST00000573203 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
NDE1-207ENST00000573203 PXDNQ92626 1479 aa13.06□□□□□ -0.32
NDE1-207ENST00000573203 XPCQ01831 940 aaPredicted RBP13.06□□□□□ -0.32
NDE1-207ENST00000573203 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
NDE1-207ENST00000573203 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
NDE1-207ENST00000573203 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
NDE1-207ENST00000573203 USP32Q8NFA0 1604 aa13.04□□□□□ -0.32
NDE1-207ENST00000573203 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
NDE1-207ENST00000573203 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
NDE1-207ENST00000573203 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
NDE1-207ENST00000573203 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
NDE1-207ENST00000573203 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
NDE1-207ENST00000573203 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 C8orf37Q96NL8 207 aa13.02□□□□□ -0.33
NDE1-207ENST00000573203 PSME1Q06323 249 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 AFF2P51816 1311 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
NDE1-207ENST00000573203 ITSN1Q15811 1721 aa13□□□□□ -0.33
NDE1-207ENST00000573203 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
NDE1-207ENST00000573203 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
NDE1-207ENST00000573203 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
NDE1-207ENST00000573203 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms