RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 RXRBP28702 533 aa17.31■□□□□ 0.36
PRPF8-206ENST00000572723 C14orf93Q9H972 538 aaKnown RBP17.31■□□□□ 0.36
PRPF8-206ENST00000572723 TECPR2O15040 1411 aa17.3■□□□□ 0.36
PRPF8-206ENST00000572723 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
PRPF8-206ENST00000572723 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
PRPF8-206ENST00000572723 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
PRPF8-206ENST00000572723 LAMC1P11047 1609 aa17.29■□□□□ 0.36
PRPF8-206ENST00000572723 AFF2P51816 1311 aa17.29■□□□□ 0.36
PRPF8-206ENST00000572723 HRCP23327 699 aa17.29■□□□□ 0.36
PRPF8-206ENST00000572723 PIK3C2GO75747 1445 aa17.29■□□□□ 0.36
PRPF8-206ENST00000572723 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.36
PRPF8-206ENST00000572723 C8orf37Q96NL8 207 aa17.27■□□□□ 0.36
PRPF8-206ENST00000572723 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
PRPF8-206ENST00000572723 QTRT2Q9H974 415 aaKnown RBP17.26■□□□□ 0.35
PRPF8-206ENST00000572723 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
PRPF8-206ENST00000572723 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
PRPF8-206ENST00000572723 CDC42BPGQ6DT37 1551 aa17.25■□□□□ 0.35
PRPF8-206ENST00000572723 FOXO3O43524 673 aa17.25■□□□□ 0.35
PRPF8-206ENST00000572723 NGLY1Q96IV0 654 aa17.25■□□□□ 0.35
PRPF8-206ENST00000572723 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
PRPF8-206ENST00000572723 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
PRPF8-206ENST00000572723 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
PRPF8-206ENST00000572723 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
PRPF8-206ENST00000572723 NRXN1Q9ULB1 1477 aa17.23■□□□□ 0.35
PRPF8-206ENST00000572723 KNDC1Q76NI1 1749 aa17.22■□□□□ 0.35
PRPF8-206ENST00000572723 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
PRPF8-206ENST00000572723 MYOM2P54296 1465 aa17.22■□□□□ 0.35
PRPF8-206ENST00000572723 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.35
PRPF8-206ENST00000572723 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
PRPF8-206ENST00000572723 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRPF8-206ENST00000572723 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
PRPF8-206ENST00000572723 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
PRPF8-206ENST00000572723 PRAM1Q96QH2 718 aa17.18■□□□□ 0.34
PRPF8-206ENST00000572723 USP21Q9UK80 565 aa17.18■□□□□ 0.34
PRPF8-206ENST00000572723 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
PRPF8-206ENST00000572723 PXDNQ92626 1479 aa17.18■□□□□ 0.34
PRPF8-206ENST00000572723 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
PRPF8-206ENST00000572723 POGKQ9P215 609 aa17.17■□□□□ 0.34
PRPF8-206ENST00000572723 TRPC5Q9UL62 973 aaPredicted RBP17.16■□□□□ 0.34
PRPF8-206ENST00000572723 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
PRPF8-206ENST00000572723 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
PRPF8-206ENST00000572723 PSME1Q06323 249 aa17.15■□□□□ 0.34
PRPF8-206ENST00000572723 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
PRPF8-206ENST00000572723 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
PRPF8-206ENST00000572723 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
PRPF8-206ENST00000572723 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
PRPF8-206ENST00000572723 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
PRPF8-206ENST00000572723 KIF1AQ12756 1690 aa17.12■□□□□ 0.33
PRPF8-206ENST00000572723 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
PRPF8-206ENST00000572723 RGS12O14924 1447 aa17.09■□□□□ 0.33
PRPF8-206ENST00000572723 ADGRB1O14514 1584 aa17.09■□□□□ 0.33
PRPF8-206ENST00000572723 BCL9LQ86UU0 1499 aa17.08■□□□□ 0.32
PRPF8-206ENST00000572723 ATRNO75882 1429 aa17.08■□□□□ 0.32
PRPF8-206ENST00000572723 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
PRPF8-206ENST00000572723 ANKARQ7Z5J8 1434 aa17.07■□□□□ 0.32
PRPF8-206ENST00000572723 SBNO1A3KN83 1393 aa17.07■□□□□ 0.32
PRPF8-206ENST00000572723 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
PRPF8-206ENST00000572723 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
PRPF8-206ENST00000572723 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-206ENST00000572723 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-206ENST00000572723 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
PRPF8-206ENST00000572723 GJD4Q96KN9 370 aaPredicted RBP17.06■□□□□ 0.32
PRPF8-206ENST00000572723 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
PRPF8-206ENST00000572723 TNS3Q68CZ2 1445 aa17.04■□□□□ 0.32
PRPF8-206ENST00000572723 EIF3AQ14152 1382 aaKnown RBP17.04■□□□□ 0.32
PRPF8-206ENST00000572723 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
PRPF8-206ENST00000572723 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
PRPF8-206ENST00000572723 CABLES1Q8TDN4 633 aa17.03■□□□□ 0.32
PRPF8-206ENST00000572723 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.32
PRPF8-206ENST00000572723 ADGRB2O60241 1585 aa17.02■□□□□ 0.32
PRPF8-206ENST00000572723 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
PRPF8-206ENST00000572723 SLIT2O94813 1529 aa17.01■□□□□ 0.31
PRPF8-206ENST00000572723 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
PRPF8-206ENST00000572723 USP32Q8NFA0 1604 aa17■□□□□ 0.31
PRPF8-206ENST00000572723 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
PRPF8-206ENST00000572723 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
PRPF8-206ENST00000572723 TULP4Q9NRJ4 1543 aa16.98■□□□□ 0.31
PRPF8-206ENST00000572723 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
PRPF8-206ENST00000572723 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
PRPF8-206ENST00000572723 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
PRPF8-206ENST00000572723 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
PRPF8-206ENST00000572723 VPS72Q15906 364 aa16.97■□□□□ 0.31
PRPF8-206ENST00000572723 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
PRPF8-206ENST00000572723 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
PRPF8-206ENST00000572723 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
PRPF8-206ENST00000572723 NBPF1Q3BBV0 1214 aa16.95■□□□□ 0.3
PRPF8-206ENST00000572723 ARHGEF28Q8N1W1 1705 aaKnown RBP16.95■□□□□ 0.3
PRPF8-206ENST00000572723 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
PRPF8-206ENST00000572723 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
PRPF8-206ENST00000572723 CCDC61Q9Y6R9 512 aa16.94■□□□□ 0.3
PRPF8-206ENST00000572723 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
PRPF8-206ENST00000572723 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
PRPF8-206ENST00000572723 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
PRPF8-206ENST00000572723 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
PRPF8-206ENST00000572723 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
PRPF8-206ENST00000572723 GLI3P10071 1580 aa16.91■□□□□ 0.3
PRPF8-206ENST00000572723 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
PRPF8-206ENST00000572723 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
PRPF8-206ENST00000572723 BTG4Q9NY30 223 aa16.91■□□□□ 0.3
PRPF8-206ENST00000572723 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms