RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 LRP6O75581 1613 aa14.26□□□□□ -0.13
TRIM25-204ENST00000570749 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
TRIM25-204ENST00000570749 FMN2Q9NZ56 1722 aa14.24□□□□□ -0.13
TRIM25-204ENST00000570749 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
TRIM25-204ENST00000570749 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
TRIM25-204ENST00000570749 DLC1Q96QB1 1528 aa14.24□□□□□ -0.13
TRIM25-204ENST00000570749 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
TRIM25-204ENST00000570749 PNPLA6Q8IY17 1366 aa14.22□□□□□ -0.13
TRIM25-204ENST00000570749 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
TRIM25-204ENST00000570749 NPHP3Q7Z494 1330 aa14.22□□□□□ -0.13
TRIM25-204ENST00000570749 POTEAQ6S8J7 498 aa14.21□□□□□ -0.13
TRIM25-204ENST00000570749 ADGRB2O60241 1585 aa14.2□□□□□ -0.14
TRIM25-204ENST00000570749 CDK12Q9NYV4 1490 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-204ENST00000570749 STK26Q9P289 416 aa14.19□□□□□ -0.14
TRIM25-204ENST00000570749 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
TRIM25-204ENST00000570749 EIF3AQ14152 1382 aaKnown RBP14.18□□□□□ -0.14
TRIM25-204ENST00000570749 KIAA1210Q9ULL0 1709 aa14.18□□□□□ -0.14
TRIM25-204ENST00000570749 MARF1Q9Y4F3 1742 aaKnown RBP14.18□□□□□ -0.14
TRIM25-204ENST00000570749 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
TRIM25-204ENST00000570749 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
TRIM25-204ENST00000570749 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
TRIM25-204ENST00000570749 PXDNQ92626 1479 aa14.17□□□□□ -0.14
TRIM25-204ENST00000570749 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
TRIM25-204ENST00000570749 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
TRIM25-204ENST00000570749 ANKARQ7Z5J8 1434 aa14.15□□□□□ -0.14
TRIM25-204ENST00000570749 NUTM2BA6NNL0 878 aaPredicted RBP14.15□□□□□ -0.14
TRIM25-204ENST00000570749 NUTM2EB1AL46 878 aaPredicted RBP14.15□□□□□ -0.14
TRIM25-204ENST00000570749 NUTM2AQ8IVF1 878 aaPredicted RBP14.15□□□□□ -0.14
TRIM25-204ENST00000570749 RGPD8O14715 1765 aaPredicted RBP14.14□□□□□ -0.15
TRIM25-204ENST00000570749 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
TRIM25-204ENST00000570749 AFF2P51816 1311 aa14.14□□□□□ -0.15
TRIM25-204ENST00000570749 RXRBP28702 533 aa14.13□□□□□ -0.15
TRIM25-204ENST00000570749 DCAF11Q8TEB1 546 aa14.13□□□□□ -0.15
TRIM25-204ENST00000570749 DDX17Q92841 729 aaKnown RBP14.13□□□□□ -0.15
TRIM25-204ENST00000570749 ITSN1Q15811 1721 aa14.12□□□□□ -0.15
TRIM25-204ENST00000570749 POGKQ9P215 609 aa14.12□□□□□ -0.15
TRIM25-204ENST00000570749 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
TRIM25-204ENST00000570749 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
TRIM25-204ENST00000570749 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
TRIM25-204ENST00000570749 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.11□□□□□ -0.15
TRIM25-204ENST00000570749 FOXO3O43524 673 aa14.1□□□□□ -0.15
TRIM25-204ENST00000570749 PSME1Q06323 249 aa14.1□□□□□ -0.15
TRIM25-204ENST00000570749 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TRIM25-204ENST00000570749 RBM6P78332 1123 aaKnown RBP14.09□□□□□ -0.15
TRIM25-204ENST00000570749 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
TRIM25-204ENST00000570749 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
TRIM25-204ENST00000570749 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
TRIM25-204ENST00000570749 USP32Q8NFA0 1604 aa14.08□□□□□ -0.15
TRIM25-204ENST00000570749 TNS3Q68CZ2 1445 aa14.08□□□□□ -0.15
TRIM25-204ENST00000570749 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
TRIM25-204ENST00000570749 SPATA31A3Q5VYP0 1347 aa14.08□□□□□ -0.16
TRIM25-204ENST00000570749 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
TRIM25-204ENST00000570749 ADAMTS2O95450 1211 aa14.07□□□□□ -0.16
TRIM25-204ENST00000570749 KDM2AQ9Y2K7 1162 aa14.07□□□□□ -0.16
TRIM25-204ENST00000570749 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
TRIM25-204ENST00000570749 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
TRIM25-204ENST00000570749 TRPC5Q9UL62 973 aaPredicted RBP14.06□□□□□ -0.16
TRIM25-204ENST00000570749 TRAK1Q9UPV9 953 aa14.06□□□□□ -0.16
TRIM25-204ENST00000570749 ABCA3Q99758 1704 aa14.05□□□□□ -0.16
TRIM25-204ENST00000570749 NWD2Q9ULI1 1742 aa14.05□□□□□ -0.16
TRIM25-204ENST00000570749 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
TRIM25-204ENST00000570749 USP21Q9UK80 565 aa14.05□□□□□ -0.16
TRIM25-204ENST00000570749 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
TRIM25-204ENST00000570749 ATRNO75882 1429 aa14.04□□□□□ -0.16
TRIM25-204ENST00000570749 WASLO00401 505 aaPredicted RBP14.03□□□□□ -0.16
TRIM25-204ENST00000570749 SAFB2Q14151 953 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRIM25-204ENST00000570749 GPRASP1Q5JY77 1395 aa14.03□□□□□ -0.16
TRIM25-204ENST00000570749 RGS12O14924 1447 aa14.03□□□□□ -0.16
TRIM25-204ENST00000570749 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
TRIM25-204ENST00000570749 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
TRIM25-204ENST00000570749 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
TRIM25-204ENST00000570749 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
TRIM25-204ENST00000570749 SLIT2O94813 1529 aa14□□□□□ -0.17
TRIM25-204ENST00000570749 ATP7BP35670 1465 aa14□□□□□ -0.17
TRIM25-204ENST00000570749 BCL9LQ86UU0 1499 aa14□□□□□ -0.17
TRIM25-204ENST00000570749 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
TRIM25-204ENST00000570749 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
TRIM25-204ENST00000570749 ATAD2Q6PL18 1390 aa13.99□□□□□ -0.17
TRIM25-204ENST00000570749 UPF1Q92900 1129 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM25-204ENST00000570749 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
TRIM25-204ENST00000570749 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
TRIM25-204ENST00000570749 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
TRIM25-204ENST00000570749 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
TRIM25-204ENST00000570749 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
TRIM25-204ENST00000570749 CRYBG1Q9Y4K1 1723 aa13.97□□□□□ -0.17
TRIM25-204ENST00000570749 PRR36Q9H6K5 1346 aa13.96□□□□□ -0.17
TRIM25-204ENST00000570749 NGDNQ8NEJ9 315 aaKnown RBP13.96□□□□□ -0.17
TRIM25-204ENST00000570749 PMFBP1Q8TBY8 1022 aa13.96□□□□□ -0.17
TRIM25-204ENST00000570749 EP400Q96L91 3159 aa13.95□□□□□ -0.18
TRIM25-204ENST00000570749 GJD4Q96KN9 370 aaPredicted RBP13.95□□□□□ -0.18
TRIM25-204ENST00000570749 POLR3AO14802 1390 aaPredicted RBP13.95□□□□□ -0.18
TRIM25-204ENST00000570749 BRD4O60885 1362 aaPredicted RBP13.95□□□□□ -0.18
TRIM25-204ENST00000570749 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
TRIM25-204ENST00000570749 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
TRIM25-204ENST00000570749 NUDT16Q96DE0 195 aaKnown RBP13.94□□□□□ -0.18
TRIM25-204ENST00000570749 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
TRIM25-204ENST00000570749 NRAPQ86VF7 1730 aa13.93□□□□□ -0.18
TRIM25-204ENST00000570749 GLI3P10071 1580 aa13.93□□□□□ -0.18
TRIM25-204ENST00000570749 CDK19Q9BWU1 502 aa13.93□□□□□ -0.18
TRIM25-204ENST00000570749 PHRF1Q9P1Y6 1649 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms