RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
CDT1-203ENST00000569140 HSPA1LP34931 641 aa18.33■□□□□ 0.52
CDT1-203ENST00000569140 NBPF1Q3BBV0 1214 aa18.33■□□□□ 0.52
CDT1-203ENST00000569140 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
CDT1-203ENST00000569140 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
CDT1-203ENST00000569140 MST1RQ04912 1400 aa18.31■□□□□ 0.52
CDT1-203ENST00000569140 CDC42BPGQ6DT37 1551 aa18.3■□□□□ 0.52
CDT1-203ENST00000569140 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
CDT1-203ENST00000569140 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
CDT1-203ENST00000569140 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
CDT1-203ENST00000569140 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
CDT1-203ENST00000569140 SIRT1Q96EB6 747 aa18.29■□□□□ 0.52
CDT1-203ENST00000569140 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
CDT1-203ENST00000569140 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
CDT1-203ENST00000569140 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
CDT1-203ENST00000569140 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
CDT1-203ENST00000569140 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
CDT1-203ENST00000569140 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
CDT1-203ENST00000569140 ESCO1Q5FWF5 840 aa18.23■□□□□ 0.51
CDT1-203ENST00000569140 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
CDT1-203ENST00000569140 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
CDT1-203ENST00000569140 ORAI2Q96SN7 254 aa18.22■□□□□ 0.51
CDT1-203ENST00000569140 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
CDT1-203ENST00000569140 ADGRB2O60241 1585 aa18.21■□□□□ 0.51
CDT1-203ENST00000569140 EIF3AQ14152 1382 aaKnown RBP18.21■□□□□ 0.51
CDT1-203ENST00000569140 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
CDT1-203ENST00000569140 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
CDT1-203ENST00000569140 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
CDT1-203ENST00000569140 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
CDT1-203ENST00000569140 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
CDT1-203ENST00000569140 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
CDT1-203ENST00000569140 RGPD8O14715 1765 aaPredicted RBP18.17■□□□□ 0.5
CDT1-203ENST00000569140 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
CDT1-203ENST00000569140 GPRASP1Q5JY77 1395 aa18.16■□□□□ 0.5
CDT1-203ENST00000569140 TULP4Q9NRJ4 1543 aa18.15■□□□□ 0.5
CDT1-203ENST00000569140 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
CDT1-203ENST00000569140 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.49
CDT1-203ENST00000569140 XPCQ01831 940 aaPredicted RBP18.14■□□□□ 0.49
CDT1-203ENST00000569140 CDK19Q9BWU1 502 aa18.14■□□□□ 0.49
CDT1-203ENST00000569140 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
CDT1-203ENST00000569140 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
CDT1-203ENST00000569140 FOXO3O43524 673 aa18.13■□□□□ 0.49
CDT1-203ENST00000569140 PHF8Q9UPP1 1060 aa18.13■□□□□ 0.49
CDT1-203ENST00000569140 PMFBP1Q8TBY8 1022 aa18.12■□□□□ 0.49
CDT1-203ENST00000569140 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
CDT1-203ENST00000569140 JCADQ9P266 1359 aa18.12■□□□□ 0.49
CDT1-203ENST00000569140 ITSN1Q15811 1721 aa18.1■□□□□ 0.49
CDT1-203ENST00000569140 PRR36Q9H6K5 1346 aa18.1■□□□□ 0.49
CDT1-203ENST00000569140 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
CDT1-203ENST00000569140 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
CDT1-203ENST00000569140 NUDT16Q96DE0 195 aaKnown RBP18.09■□□□□ 0.49
CDT1-203ENST00000569140 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
CDT1-203ENST00000569140 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.49
CDT1-203ENST00000569140 ATP7BP35670 1465 aa18.08■□□□□ 0.49
CDT1-203ENST00000569140 PSME1Q06323 249 aa18.07■□□□□ 0.48
CDT1-203ENST00000569140 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
CDT1-203ENST00000569140 USP47Q96K76 1375 aa18.06■□□□□ 0.48
CDT1-203ENST00000569140 SHPRHQ149N8 1683 aa18.06■□□□□ 0.48
CDT1-203ENST00000569140 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
CDT1-203ENST00000569140 NUTM2BA6NNL0 878 aaPredicted RBP18.06■□□□□ 0.48
CDT1-203ENST00000569140 NUTM2EB1AL46 878 aaPredicted RBP18.06■□□□□ 0.48
CDT1-203ENST00000569140 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
CDT1-203ENST00000569140 NUTM2AQ8IVF1 878 aaPredicted RBP18.06■□□□□ 0.48
CDT1-203ENST00000569140 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
CDT1-203ENST00000569140 PXDNQ92626 1479 aa18.06■□□□□ 0.48
CDT1-203ENST00000569140 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
CDT1-203ENST00000569140 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
CDT1-203ENST00000569140 TOPAZ1Q8N9V7 1692 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 PLEKHG5O94827 1062 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 LMOD2Q6P5Q4 547 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
CDT1-203ENST00000569140 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
CDT1-203ENST00000569140 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.48
CDT1-203ENST00000569140 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
CDT1-203ENST00000569140 SBNO2Q9Y2G9 1366 aa18.01■□□□□ 0.47
CDT1-203ENST00000569140 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
CDT1-203ENST00000569140 ACEP12821 1306 aa17.98■□□□□ 0.47
CDT1-203ENST00000569140 LRP6O75581 1613 aa17.98■□□□□ 0.47
CDT1-203ENST00000569140 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
CDT1-203ENST00000569140 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
CDT1-203ENST00000569140 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
CDT1-203ENST00000569140 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
CDT1-203ENST00000569140 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
CDT1-203ENST00000569140 TMC1Q8TDI8 760 aa17.96■□□□□ 0.47
CDT1-203ENST00000569140 TRPM3Q9HCF6 1732 aaPredicted RBP17.95■□□□□ 0.46
CDT1-203ENST00000569140 COL22A1Q8NFW1 1626 aaPredicted RBP17.95■□□□□ 0.46
CDT1-203ENST00000569140 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
CDT1-203ENST00000569140 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
CDT1-203ENST00000569140 TMF1P82094 1093 aa17.95■□□□□ 0.46
CDT1-203ENST00000569140 TESK2Q96S53 571 aa17.95■□□□□ 0.46
CDT1-203ENST00000569140 POLR3AO14802 1390 aaPredicted RBP17.94■□□□□ 0.46
CDT1-203ENST00000569140 ARHGEF10O15013 1369 aa17.94■□□□□ 0.46
CDT1-203ENST00000569140 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
CDT1-203ENST00000569140 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDT1-203ENST00000569140 C8orf37Q96NL8 207 aa17.93■□□□□ 0.46
CDT1-203ENST00000569140 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
CDT1-203ENST00000569140 NUTM2GQ5VZR2 741 aa17.91■□□□□ 0.46
CDT1-203ENST00000569140 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms