RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
GTF3C1-209ENST00000568569 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
GTF3C1-209ENST00000568569 COL22A1Q8NFW1 1626 aaPredicted RBP17.89■□□□□ 0.45
GTF3C1-209ENST00000568569 KIF1BO60333 1816 aa17.88■□□□□ 0.45
GTF3C1-209ENST00000568569 ESCO1Q5FWF5 840 aa17.88■□□□□ 0.45
GTF3C1-209ENST00000568569 NAIPQ13075 1403 aa17.88■□□□□ 0.45
GTF3C1-209ENST00000568569 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-209ENST00000568569 CCDC125Q86Z20 511 aa17.87■□□□□ 0.45
GTF3C1-209ENST00000568569 BCL9LQ86UU0 1499 aa17.87■□□□□ 0.45
GTF3C1-209ENST00000568569 PXDNQ92626 1479 aa17.86■□□□□ 0.45
GTF3C1-209ENST00000568569 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
GTF3C1-209ENST00000568569 LRPPRCP42704 1394 aaKnown RBP17.85■□□□□ 0.45
GTF3C1-209ENST00000568569 FOXO3O43524 673 aa17.84■□□□□ 0.45
GTF3C1-209ENST00000568569 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
GTF3C1-209ENST00000568569 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.45
GTF3C1-209ENST00000568569 XPCQ01831 940 aaPredicted RBP17.83■□□□□ 0.44
GTF3C1-209ENST00000568569 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
GTF3C1-209ENST00000568569 TECPR2O15040 1411 aa17.8■□□□□ 0.44
GTF3C1-209ENST00000568569 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
GTF3C1-209ENST00000568569 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
GTF3C1-209ENST00000568569 STK26Q9P289 416 aa17.78■□□□□ 0.44
GTF3C1-209ENST00000568569 PPLO60437 1756 aa17.78■□□□□ 0.44
GTF3C1-209ENST00000568569 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
GTF3C1-209ENST00000568569 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
GTF3C1-209ENST00000568569 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
GTF3C1-209ENST00000568569 SLIT2O94813 1529 aa17.77■□□□□ 0.43
GTF3C1-209ENST00000568569 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
GTF3C1-209ENST00000568569 SPATA31A3Q5VYP0 1347 aa17.76■□□□□ 0.43
GTF3C1-209ENST00000568569 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
GTF3C1-209ENST00000568569 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
GTF3C1-209ENST00000568569 ANKRD30BQ9BXX2 1392 aa17.75■□□□□ 0.43
GTF3C1-209ENST00000568569 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-209ENST00000568569 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-209ENST00000568569 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
GTF3C1-209ENST00000568569 GLI3P10071 1580 aa17.73■□□□□ 0.43
GTF3C1-209ENST00000568569 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
GTF3C1-209ENST00000568569 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
GTF3C1-209ENST00000568569 HAP1P54257 671 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-209ENST00000568569 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
GTF3C1-209ENST00000568569 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
GTF3C1-209ENST00000568569 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
GTF3C1-209ENST00000568569 PIK3C2GO75747 1445 aa17.71■□□□□ 0.43
GTF3C1-209ENST00000568569 USP32Q8NFA0 1604 aa17.7■□□□□ 0.42
GTF3C1-209ENST00000568569 DEFB132Q7Z7B7 95 aa17.7■□□□□ 0.42
GTF3C1-209ENST00000568569 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
GTF3C1-209ENST00000568569 KIF1AQ12756 1690 aa17.7■□□□□ 0.42
GTF3C1-209ENST00000568569 VPS72Q15906 364 aa17.69■□□□□ 0.42
GTF3C1-209ENST00000568569 SEPT12Q8IYM1 358 aa17.69■□□□□ 0.42
GTF3C1-209ENST00000568569 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
GTF3C1-209ENST00000568569 PSME1Q06323 249 aa17.68■□□□□ 0.42
GTF3C1-209ENST00000568569 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
GTF3C1-209ENST00000568569 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
GTF3C1-209ENST00000568569 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
GTF3C1-209ENST00000568569 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
GTF3C1-209ENST00000568569 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
GTF3C1-209ENST00000568569 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
GTF3C1-209ENST00000568569 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
GTF3C1-209ENST00000568569 CABLES1Q8TDN4 633 aa17.65■□□□□ 0.42
GTF3C1-209ENST00000568569 ARHGEF10O15013 1369 aa17.65■□□□□ 0.42
GTF3C1-209ENST00000568569 KRT27Q7Z3Y8 459 aa17.64■□□□□ 0.41
GTF3C1-209ENST00000568569 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
GTF3C1-209ENST00000568569 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
GTF3C1-209ENST00000568569 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
GTF3C1-209ENST00000568569 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
GTF3C1-209ENST00000568569 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
GTF3C1-209ENST00000568569 C14orf93Q9H972 538 aaKnown RBP17.62■□□□□ 0.41
GTF3C1-209ENST00000568569 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
GTF3C1-209ENST00000568569 A0A0G2JS52 829 aa17.6■□□□□ 0.41
GTF3C1-209ENST00000568569 BAG6P46379 1132 aa17.6■□□□□ 0.41
GTF3C1-209ENST00000568569 MYT1Q01538 1121 aa17.6■□□□□ 0.41
GTF3C1-209ENST00000568569 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
GTF3C1-209ENST00000568569 BRWD3Q6RI45 1802 aa17.6■□□□□ 0.41
GTF3C1-209ENST00000568569 PRAM1Q96QH2 718 aa17.59■□□□□ 0.41
GTF3C1-209ENST00000568569 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
GTF3C1-209ENST00000568569 LRP5O75197 1615 aa17.58■□□□□ 0.41
GTF3C1-209ENST00000568569 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
GTF3C1-209ENST00000568569 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
GTF3C1-209ENST00000568569 SAFB2Q14151 953 aaKnown RBP eCLIP17.58■□□□□ 0.4
GTF3C1-209ENST00000568569 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
GTF3C1-209ENST00000568569 FAM98CQ17RN3 349 aaKnown RBP17.56■□□□□ 0.4
GTF3C1-209ENST00000568569 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
GTF3C1-209ENST00000568569 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-209ENST00000568569 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
GTF3C1-209ENST00000568569 POGKQ9P215 609 aa17.55■□□□□ 0.4
GTF3C1-209ENST00000568569 ABCA3Q99758 1704 aa17.55■□□□□ 0.4
GTF3C1-209ENST00000568569 HRCP23327 699 aa17.54■□□□□ 0.4
GTF3C1-209ENST00000568569 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
GTF3C1-209ENST00000568569 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
GTF3C1-209ENST00000568569 RGPD8O14715 1765 aaPredicted RBP17.52■□□□□ 0.4
GTF3C1-209ENST00000568569 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.39
GTF3C1-209ENST00000568569 ADGRB2O60241 1585 aa17.51■□□□□ 0.39
GTF3C1-209ENST00000568569 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
GTF3C1-209ENST00000568569 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
GTF3C1-209ENST00000568569 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
GTF3C1-209ENST00000568569 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
GTF3C1-209ENST00000568569 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
GTF3C1-209ENST00000568569 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
GTF3C1-209ENST00000568569 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
GTF3C1-209ENST00000568569 COL14A1Q05707 1796 aaKnown RBP17.48■□□□□ 0.39
GTF3C1-209ENST00000568569 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms