RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
CMTM3-215ENST00000568477 DDX17Q92841 729 aaKnown RBP21.12■□□□□ 0.97
CMTM3-215ENST00000568477 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
CMTM3-215ENST00000568477 LRP6O75581 1613 aa21.11■□□□□ 0.97
CMTM3-215ENST00000568477 PLEKHH1Q9ULM0 1364 aa21.11■□□□□ 0.97
CMTM3-215ENST00000568477 MEX3CQ5U5Q3 659 aaKnown RBP21.11■□□□□ 0.97
CMTM3-215ENST00000568477 ORAI2Q96SN7 254 aa21.11■□□□□ 0.97
CMTM3-215ENST00000568477 SIRT1Q96EB6 747 aa21.1■□□□□ 0.97
CMTM3-215ENST00000568477 DCAF11Q8TEB1 546 aa21.09■□□□□ 0.97
CMTM3-215ENST00000568477 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
CMTM3-215ENST00000568477 STAC3Q96MF2 364 aa21.08■□□□□ 0.97
CMTM3-215ENST00000568477 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
CMTM3-215ENST00000568477 NUTM2BA6NNL0 878 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-215ENST00000568477 NUTM2EB1AL46 878 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-215ENST00000568477 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
CMTM3-215ENST00000568477 NUTM2AQ8IVF1 878 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-215ENST00000568477 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
CMTM3-215ENST00000568477 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
CMTM3-215ENST00000568477 ADGRB1O14514 1584 aa21.04■□□□□ 0.96
CMTM3-215ENST00000568477 DLC1Q96QB1 1528 aa21.04■□□□□ 0.96
CMTM3-215ENST00000568477 NUTM2FA1L443 756 aa21.03■□□□□ 0.96
CMTM3-215ENST00000568477 PRAM1Q96QH2 718 aa21.03■□□□□ 0.96
CMTM3-215ENST00000568477 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
CMTM3-215ENST00000568477 FMN2Q9NZ56 1722 aa21.02■□□□□ 0.96
CMTM3-215ENST00000568477 SAFB2Q14151 953 aaKnown RBP eCLIP21.01■□□□□ 0.95
CMTM3-215ENST00000568477 POGKQ9P215 609 aa21.01■□□□□ 0.95
CMTM3-215ENST00000568477 ZNF772Q68DY9 489 aaPredicted RBP21■□□□□ 0.95
CMTM3-215ENST00000568477 TRAK1Q9UPV9 953 aa20.99■□□□□ 0.95
CMTM3-215ENST00000568477 FOXO3O43524 673 aa20.98■□□□□ 0.95
CMTM3-215ENST00000568477 PXDNQ92626 1479 aa20.97■□□□□ 0.95
CMTM3-215ENST00000568477 KIF1AQ12756 1690 aa20.96■□□□□ 0.95
CMTM3-215ENST00000568477 XPCQ01831 940 aaPredicted RBP20.95■□□□□ 0.94
CMTM3-215ENST00000568477 AFF2P51816 1311 aa20.95■□□□□ 0.94
CMTM3-215ENST00000568477 ADGRB2O60241 1585 aa20.94■□□□□ 0.94
CMTM3-215ENST00000568477 C8orf37Q96NL8 207 aa20.93■□□□□ 0.94
CMTM3-215ENST00000568477 ADAMTS2O95450 1211 aa20.92■□□□□ 0.94
CMTM3-215ENST00000568477 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
CMTM3-215ENST00000568477 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
CMTM3-215ENST00000568477 COL22A1Q8NFW1 1626 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-215ENST00000568477 MINK1Q8N4C8 1332 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-215ENST00000568477 EIF3AQ14152 1382 aaKnown RBP20.9■□□□□ 0.94
CMTM3-215ENST00000568477 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-215ENST00000568477 NGLY1Q96IV0 654 aa20.89■□□□□ 0.93
CMTM3-215ENST00000568477 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
CMTM3-215ENST00000568477 KIAA1210Q9ULL0 1709 aa20.89■□□□□ 0.93
CMTM3-215ENST00000568477 KRT28Q7Z3Y7 464 aa20.88■□□□□ 0.93
CMTM3-215ENST00000568477 RXRBP28702 533 aa20.87■□□□□ 0.93
CMTM3-215ENST00000568477 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
CMTM3-215ENST00000568477 SPATA31A3Q5VYP0 1347 aa20.86■□□□□ 0.93
CMTM3-215ENST00000568477 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
CMTM3-215ENST00000568477 WASLO00401 505 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-215ENST00000568477 PSME1Q06323 249 aa20.85■□□□□ 0.93
CMTM3-215ENST00000568477 TULP4Q9NRJ4 1543 aa20.84■□□□□ 0.93
CMTM3-215ENST00000568477 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.93
CMTM3-215ENST00000568477 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.93
CMTM3-215ENST00000568477 TNS3Q68CZ2 1445 aa20.83■□□□□ 0.93
CMTM3-215ENST00000568477 CDK12Q9NYV4 1490 aaPredicted RBP20.82■□□□□ 0.92
CMTM3-215ENST00000568477 PRR36Q9H6K5 1346 aa20.82■□□□□ 0.92
CMTM3-215ENST00000568477 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
CMTM3-215ENST00000568477 L3MBTL2Q969R5 705 aa20.82■□□□□ 0.92
CMTM3-215ENST00000568477 QTRT2Q9H974 415 aaKnown RBP20.82■□□□□ 0.92
CMTM3-215ENST00000568477 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
CMTM3-215ENST00000568477 USP21Q9UK80 565 aa20.81■□□□□ 0.92
CMTM3-215ENST00000568477 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
CMTM3-215ENST00000568477 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
CMTM3-215ENST00000568477 FNBP4Q8N3X1 1017 aaPredicted RBP20.8■□□□□ 0.92
CMTM3-215ENST00000568477 ARHGEF10O15013 1369 aa20.79■□□□□ 0.92
CMTM3-215ENST00000568477 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
CMTM3-215ENST00000568477 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
CMTM3-215ENST00000568477 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-215ENST00000568477 TRPC5Q9UL62 973 aaPredicted RBP20.77■□□□□ 0.92
CMTM3-215ENST00000568477 MARF1Q9Y4F3 1742 aaKnown RBP20.77■□□□□ 0.92
CMTM3-215ENST00000568477 ATP7BP35670 1465 aa20.76■□□□□ 0.91
CMTM3-215ENST00000568477 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
CMTM3-215ENST00000568477 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
CMTM3-215ENST00000568477 NUDT16Q96DE0 195 aaKnown RBP20.76■□□□□ 0.91
CMTM3-215ENST00000568477 CDK19Q9BWU1 502 aa20.75■□□□□ 0.91
CMTM3-215ENST00000568477 RGS12O14924 1447 aa20.74■□□□□ 0.91
CMTM3-215ENST00000568477 ATRNO75882 1429 aa20.74■□□□□ 0.91
CMTM3-215ENST00000568477 ITSN1Q15811 1721 aa20.74■□□□□ 0.91
CMTM3-215ENST00000568477 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-215ENST00000568477 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
CMTM3-215ENST00000568477 CABLES1Q8TDN4 633 aa20.73■□□□□ 0.91
CMTM3-215ENST00000568477 TRPM3Q9HCF6 1732 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-215ENST00000568477 BCL9LQ86UU0 1499 aa20.72■□□□□ 0.91
CMTM3-215ENST00000568477 TRPM1Q7Z4N2 1603 aa20.71■□□□□ 0.91
CMTM3-215ENST00000568477 SLIT2O94813 1529 aa20.69■□□□□ 0.9
CMTM3-215ENST00000568477 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
CMTM3-215ENST00000568477 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
CMTM3-215ENST00000568477 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
CMTM3-215ENST00000568477 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
CMTM3-215ENST00000568477 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-215ENST00000568477 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
CMTM3-215ENST00000568477 TOPAZ1Q8N9V7 1692 aa20.67■□□□□ 0.9
CMTM3-215ENST00000568477 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
CMTM3-215ENST00000568477 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.92e-8■■■■□ 23.8
CMTM3-215ENST00000568477 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
CMTM3-215ENST00000568477 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
CMTM3-215ENST00000568477 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
CMTM3-215ENST00000568477 ACEP12821 1306 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms