RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 STRN4Q9NRL3 753 aa7.52□□□□□ -1.21
CNOT1-211ENST00000567188 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.21
CNOT1-211ENST00000567188 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
CNOT1-211ENST00000567188 CLSTN1O94985 981 aa7.51□□□□□ -1.21
CNOT1-211ENST00000567188 MAP3K1Q13233 1512 aa7.51□□□□□ -1.21
CNOT1-211ENST00000567188 TMX4Q9H1E5 349 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-211ENST00000567188 ZMYM3Q14202 1370 aa7.51□□□□□ -1.21
CNOT1-211ENST00000567188 PDIA4P13667 645 aaKnown RBP7.51□□□□□ -1.21
CNOT1-211ENST00000567188 THEMISQ8N1K5 641 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-211ENST00000567188 HFM1A2PYH4 1435 aa7.51□□□□□ -1.21
CNOT1-211ENST00000567188 AMPHP49418 695 aa7.51□□□□□ -1.21
CNOT1-211ENST00000567188 GBP4Q96PP9 640 aa7.5□□□□□ -1.21
CNOT1-211ENST00000567188 ABCA6Q8N139 1617 aa7.5□□□□□ -1.21
CNOT1-211ENST00000567188 CFAP53Q96M91 514 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 EVC2Q86UK5 1308 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 DIP2BQ9P265 1576 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 SYTL4Q96C24 671 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-211ENST00000567188 MAP3K4Q9Y6R4 1608 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 IDI1Q13907 227 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 MAPK8IP3Q9UPT6 1336 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 NCOA1Q15788 1441 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 GGNBP2Q9H3C7 697 aa7.49□□□□□ -1.21
CNOT1-211ENST00000567188 ABCA9Q8IUA7 1624 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 ISY1Q9ULR0 285 aaKnown RBP7.48□□□□□ -1.21
CNOT1-211ENST00000567188 ROCK1Q13464 1354 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 CAMSAP1Q5T5Y3 1602 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 CASC1Q6TDU7 716 aa7.48□□□□□ -1.21
CNOT1-211ENST00000567188 KTN1Q86UP2 1357 aaKnown RBP7.47□□□□□ -1.21
CNOT1-211ENST00000567188 HMOX1P09601 288 aa7.47□□□□□ -1.21
CNOT1-211ENST00000567188 SKOR2Q2VWA4 1001 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-211ENST00000567188 AMOTL2Q9Y2J4 779 aa7.47□□□□□ -1.21
CNOT1-211ENST00000567188 ABTB2Q8N961 1025 aa7.47□□□□□ -1.21
CNOT1-211ENST00000567188 KIF1BO60333 1816 aa7.47□□□□□ -1.21
CNOT1-211ENST00000567188 ZNF771Q7L3S4 317 aaPredicted RBP7.47□□□□□ -1.21
CNOT1-211ENST00000567188 PPP6R1Q9UPN7 881 aa7.47□□□□□ -1.21
CNOT1-211ENST00000567188 NGEFQ8N5V2 710 aa7.46□□□□□ -1.21
CNOT1-211ENST00000567188 FER1L4A9Z1Z3 1794 aa7.46□□□□□ -1.21
CNOT1-211ENST00000567188 MSH5O43196 834 aa7.46□□□□□ -1.21
CNOT1-211ENST00000567188 COG3Q96JB2 828 aa7.46□□□□□ -1.21
CNOT1-211ENST00000567188 CABP1Q9NZU7 370 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 KDM5DQ9BY66 1539 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 DDX11L8A8MPP1 907 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 MAPKBP1O60336 1514 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 FBLN1P23142 703 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 RRS1Q15050 365 aaKnown RBP7.46□□□□□ -1.22
CNOT1-211ENST00000567188 KLHL34Q8N239 644 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
CNOT1-211ENST00000567188 TEX35Q5T0J7 233 aa7.45□□□□□ -1.22
CNOT1-211ENST00000567188 CENPJQ9HC77 1338 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-211ENST00000567188 RTEL1-TNFRSF6BF6WH68 1400 aa7.45□□□□□ -1.22
CNOT1-211ENST00000567188 UHRF1BP1Q6BDS2 1440 aa7.45□□□□□ -1.22
CNOT1-211ENST00000567188 AMER1Q5JTC6 1135 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-211ENST00000567188 CWC15Q9P013 229 aaKnown RBP7.45□□□□□ -1.22
CNOT1-211ENST00000567188 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-211ENST00000567188 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.224e-7■■□□□ 13.9
CNOT1-211ENST00000567188 FRAT1Q92837 279 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-211ENST00000567188 SYAP1Q96A49 352 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-211ENST00000567188 GPS2Q13227 327 aa7.44□□□□□ -1.22
CNOT1-211ENST00000567188 HSCBQ8IWL3 235 aa7.44□□□□□ -1.22
CNOT1-211ENST00000567188 TERF2IPQ9NYB0 399 aa7.44□□□□□ -1.22
CNOT1-211ENST00000567188 SPHKAPQ2M3C7 1700 aa7.44□□□□□ -1.22
CNOT1-211ENST00000567188 HTATSF1O43719 755 aaKnown RBP7.44□□□□□ -1.22
CNOT1-211ENST00000567188 PZPP20742 1482 aa7.43□□□□□ -1.22
CNOT1-211ENST00000567188 RTF1Q92541 710 aaKnown RBP7.43□□□□□ -1.22
CNOT1-211ENST00000567188 KIF13AQ9H1H9 1805 aa7.43□□□□□ -1.22
CNOT1-211ENST00000567188 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
CNOT1-211ENST00000567188 NEO1Q92859 1461 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 ZC3H6P61129 1189 aaKnown RBP7.42□□□□□ -1.22
CNOT1-211ENST00000567188 CNKSR2Q8WXI2 1034 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 CLTCL1P53675 1640 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 CABLES1Q8TDN4 633 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 NUDCQ9Y266 331 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 LMTK3Q96Q04 1460 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 SLC12A5Q9H2X9 1139 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 E9PCH4 1651 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 AXDND1Q5T1B0 1012 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-211ENST00000567188 ZMYND15Q9H091 742 aa7.42□□□□□ -1.22
CNOT1-211ENST00000567188 PDCL3Q9H2J4 239 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 KIF7Q2M1P5 1343 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 ZRSR1Q15695 479 aaKnown RBP7.41□□□□□ -1.22
CNOT1-211ENST00000567188 DISP3Q9P2K9 1392 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 ZRANB1Q9UGI0 708 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 SHANK2Q9UPX8 1470 aa7.41□□□□□ -1.22
CNOT1-211ENST00000567188 HMGN5P82970 282 aaKnown RBP7.41□□□□□ -1.22
CNOT1-211ENST00000567188 NLRP6P59044 892 aa7.4□□□□□ -1.22
CNOT1-211ENST00000567188 MROH2AA6NES4 1674 aa7.4□□□□□ -1.22
CNOT1-211ENST00000567188 PPRC1Q5VV67 1664 aaKnown RBP7.4□□□□□ -1.22
CNOT1-211ENST00000567188 TAOK2Q9UL54 1235 aa7.4□□□□□ -1.22
CNOT1-211ENST00000567188 ANKRD30BQ9BXX2 1392 aa7.4□□□□□ -1.22
CNOT1-211ENST00000567188 RALBP1Q15311 655 aa7.4□□□□□ -1.22
CNOT1-211ENST00000567188 NUDT16Q96DE0 195 aaKnown RBP7.4□□□□□ -1.22
CNOT1-211ENST00000567188 MRE11P49959 708 aa7.4□□□□□ -1.23
CNOT1-211ENST00000567188 MADDQ8WXG6 1647 aa7.4□□□□□ -1.23
CNOT1-211ENST00000567188 CHMP4AQ9BY43 222 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms