RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CLTCL1P53675 1640 aa20.07■□□□□ 0.8
COMMD4-215ENST00000566843 TSPOAP1O95153 1857 aa20.07■□□□□ 0.8
COMMD4-215ENST00000566843 ZFYVE16Q7Z3T8 1539 aa20.06■□□□□ 0.8
COMMD4-215ENST00000566843 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
COMMD4-215ENST00000566843 ERVK-7P63135 1459 aa20.06■□□□□ 0.8
COMMD4-215ENST00000566843 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
COMMD4-215ENST00000566843 POGZQ7Z3K3 1410 aa20.05■□□□□ 0.8
COMMD4-215ENST00000566843 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-215ENST00000566843 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
COMMD4-215ENST00000566843 RRAGDQ9NQL2 400 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-215ENST00000566843 ATP7AQ04656 1500 aa20.03■□□□□ 0.8
COMMD4-215ENST00000566843 CANXP27824 592 aaKnown RBP20.03■□□□□ 0.8
COMMD4-215ENST00000566843 CARD14Q9BXL6 1004 aa20.03■□□□□ 0.8
COMMD4-215ENST00000566843 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
COMMD4-215ENST00000566843 SHPRHQ149N8 1683 aa20.02■□□□□ 0.8
COMMD4-215ENST00000566843 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.8
COMMD4-215ENST00000566843 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
COMMD4-215ENST00000566843 RARSP54136 660 aaKnown RBP20.02■□□□□ 0.8
COMMD4-215ENST00000566843 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-215ENST00000566843 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
COMMD4-215ENST00000566843 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-215ENST00000566843 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
COMMD4-215ENST00000566843 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
COMMD4-215ENST00000566843 FSD2A1L4K1 749 aa20■□□□□ 0.79
COMMD4-215ENST00000566843 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
COMMD4-215ENST00000566843 DEPDC5O75140 1603 aa19.99■□□□□ 0.79
COMMD4-215ENST00000566843 TET3O43151 1660 aa19.99■□□□□ 0.79
COMMD4-215ENST00000566843 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
COMMD4-215ENST00000566843 MYOM2P54296 1465 aa19.98■□□□□ 0.79
COMMD4-215ENST00000566843 KANK1Q14678 1352 aa19.97■□□□□ 0.79
COMMD4-215ENST00000566843 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
COMMD4-215ENST00000566843 KIDINS220Q9ULH0 1771 aa19.97■□□□□ 0.79
COMMD4-215ENST00000566843 RLBP1P12271 317 aa19.96■□□□□ 0.79
COMMD4-215ENST00000566843 RUNDC1Q96C34 613 aa19.96■□□□□ 0.79
COMMD4-215ENST00000566843 ABCA6Q8N139 1617 aa19.96■□□□□ 0.79
COMMD4-215ENST00000566843 MCM4P33991 863 aa19.96■□□□□ 0.79
COMMD4-215ENST00000566843 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
COMMD4-215ENST00000566843 XRCC6P12956 609 aaKnown RBP eCLIP19.95■□□□□ 0.78
COMMD4-215ENST00000566843 SBNO2Q9Y2G9 1366 aa19.95■□□□□ 0.78
COMMD4-215ENST00000566843 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-215ENST00000566843 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
COMMD4-215ENST00000566843 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
COMMD4-215ENST00000566843 GOLGA6L3A6NEY3 463 aa19.94■□□□□ 0.78
COMMD4-215ENST00000566843 MLH3Q9UHC1 1453 aa19.94■□□□□ 0.78
COMMD4-215ENST00000566843 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
COMMD4-215ENST00000566843 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
COMMD4-215ENST00000566843 TNNQ9UQP3 1299 aa19.92■□□□□ 0.78
COMMD4-215ENST00000566843 KIF3BO15066 747 aa19.92■□□□□ 0.78
COMMD4-215ENST00000566843 RICTORQ6R327 1708 aa19.92■□□□□ 0.78
COMMD4-215ENST00000566843 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
COMMD4-215ENST00000566843 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
COMMD4-215ENST00000566843 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
COMMD4-215ENST00000566843 FRMPD1Q5SYB0 1578 aa19.9■□□□□ 0.78
COMMD4-215ENST00000566843 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
COMMD4-215ENST00000566843 YEATS2Q9ULM3 1422 aa19.89■□□□□ 0.77
COMMD4-215ENST00000566843 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
COMMD4-215ENST00000566843 CLCN1P35523 988 aa19.88■□□□□ 0.77
COMMD4-215ENST00000566843 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
COMMD4-215ENST00000566843 MVPQ14764 893 aaKnown RBP19.88■□□□□ 0.77
COMMD4-215ENST00000566843 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
COMMD4-215ENST00000566843 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
COMMD4-215ENST00000566843 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
COMMD4-215ENST00000566843 C22orf23Q9BZE7 217 aa19.86■□□□□ 0.77
COMMD4-215ENST00000566843 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
COMMD4-215ENST00000566843 TRAK2O60296 914 aa19.85■□□□□ 0.77
COMMD4-215ENST00000566843 MRE11P49959 708 aa19.85■□□□□ 0.77
COMMD4-215ENST00000566843 NEUROD2Q15784 382 aa19.85■□□□□ 0.77
COMMD4-215ENST00000566843 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
COMMD4-215ENST00000566843 SETBP1Q9Y6X0 1596 aa19.84■□□□□ 0.77
COMMD4-215ENST00000566843 ZC3H13Q5T200 1668 aaKnown RBP19.84■□□□□ 0.77
COMMD4-215ENST00000566843 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-215ENST00000566843 KIF1BO60333 1816 aa19.84■□□□□ 0.77
COMMD4-215ENST00000566843 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
COMMD4-215ENST00000566843 CT47B1P0C2W7 299 aaPredicted RBP19.83■□□□□ 0.77
COMMD4-215ENST00000566843 PANK2Q9BZ23 570 aa19.83■□□□□ 0.77
COMMD4-215ENST00000566843 ISY1Q9ULR0 285 aaKnown RBP19.83■□□□□ 0.77
COMMD4-215ENST00000566843 ADGRB2O60241 1585 aa19.83■□□□□ 0.77
COMMD4-215ENST00000566843 DIP2CQ9Y2E4 1556 aa19.83■□□□□ 0.77
COMMD4-215ENST00000566843 HDAC1Q13547 482 aaPredicted RBP19.83■□□□□ 0.76
COMMD4-215ENST00000566843 ZKSCAN2Q63HK3 967 aa19.83■□□□□ 0.76
COMMD4-215ENST00000566843 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
COMMD4-215ENST00000566843 DDIT3P35638 169 aa19.81■□□□□ 0.76
COMMD4-215ENST00000566843 GGT6Q6P531 493 aa19.81■□□□□ 0.76
COMMD4-215ENST00000566843 DZIP1LQ8IYY4 767 aaKnown RBP19.81■□□□□ 0.76
COMMD4-215ENST00000566843 PNNQ9H307 717 aaKnown RBP19.81■□□□□ 0.76
COMMD4-215ENST00000566843 DDX11L8A8MPP1 907 aa19.81■□□□□ 0.76
COMMD4-215ENST00000566843 SPRYD3Q8NCJ5 442 aa19.8■□□□□ 0.76
COMMD4-215ENST00000566843 GZF1Q9H116 711 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-215ENST00000566843 MROH2AA6NES4 1674 aa19.79■□□□□ 0.76
COMMD4-215ENST00000566843 UGGT1Q9NYU2 1555 aa19.79■□□□□ 0.76
COMMD4-215ENST00000566843 MFAP1P55081 439 aaKnown RBP19.79■□□□□ 0.76
COMMD4-215ENST00000566843 MROH1Q8NDA8 1641 aa19.79■□□□□ 0.76
COMMD4-215ENST00000566843 CFAP53Q96M91 514 aa19.78■□□□□ 0.76
COMMD4-215ENST00000566843 MTHFSP49914 203 aa19.77■□□□□ 0.76
COMMD4-215ENST00000566843 HSCBQ8IWL3 235 aa19.77■□□□□ 0.76
COMMD4-215ENST00000566843 SMC5Q8IY18 1101 aa19.77■□□□□ 0.76
COMMD4-215ENST00000566843 SNX21Q969T3 373 aa19.77■□□□□ 0.75
COMMD4-215ENST00000566843 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
COMMD4-215ENST00000566843 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
COMMD4-215ENST00000566843 GRPEL1Q9HAV7 217 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms