RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 HAP1P54257 671 aaPredicted RBP6.86□□□□□ -1.31
SMG1-212ENST00000566328 USP46P62068 366 aa6.86□□□□□ -1.31
SMG1-212ENST00000566328 MAP2K5Q13163 448 aa6.86□□□□□ -1.31
SMG1-212ENST00000566328 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
SMG1-212ENST00000566328 KDM4AO75164 1064 aa6.85□□□□□ -1.31
SMG1-212ENST00000566328 CD46P15529 392 aa6.85□□□□□ -1.31
SMG1-212ENST00000566328 MMP16P51512 607 aa6.85□□□□□ -1.31
SMG1-212ENST00000566328 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
SMG1-212ENST00000566328 WNT7AO00755 349 aa6.84□□□□□ -1.31
SMG1-212ENST00000566328 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
SMG1-212ENST00000566328 SNIP1Q8TAD8 396 aaKnown RBP6.84□□□□□ -1.31
SMG1-212ENST00000566328 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
SMG1-212ENST00000566328 MINK1Q8N4C8 1332 aaPredicted RBP6.83□□□□□ -1.32
SMG1-212ENST00000566328 IRF6O14896 467 aa6.83□□□□□ -1.32
SMG1-212ENST00000566328 TRIM32Q13049 653 aa6.83□□□□□ -1.32
SMG1-212ENST00000566328 REPIN1Q9BWE0 567 aaKnown RBP6.83□□□□□ -1.32
SMG1-212ENST00000566328 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
SMG1-212ENST00000566328 WFS1O76024 890 aa6.82□□□□□ -1.32
SMG1-212ENST00000566328 STK17AQ9UEE5 414 aa6.82□□□□□ -1.32
SMG1-212ENST00000566328 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
SMG1-212ENST00000566328 DXOO77932 396 aaKnown RBP6.81□□□□□ -1.32
SMG1-212ENST00000566328 MDM2Q00987 491 aaPredicted RBP6.81□□□□□ -1.32
SMG1-212ENST00000566328 CCDC24Q8N4L8 307 aa6.8□□□□□ -1.32
SMG1-212ENST00000566328 KRI1Q8N9T8 703 aaKnown RBP6.8□□□□□ -1.32
SMG1-212ENST00000566328 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
SMG1-212ENST00000566328 CLCN1P35523 988 aa6.79□□□□□ -1.32
SMG1-212ENST00000566328 NFX1Q12986 1120 aaKnown RBP6.79□□□□□ -1.32
SMG1-212ENST00000566328 MRGPRX2Q96LB1 330 aa6.79□□□□□ -1.32
SMG1-212ENST00000566328 HOXA2O43364 376 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 WIPF1O43516 503 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 SMPD1P17405 629 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 WNT7BP56706 349 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 SENP2Q9HC62 589 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 GPCPD1Q9NPB8 672 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 KDM2AQ9Y2K7 1162 aa6.78□□□□□ -1.32
SMG1-212ENST00000566328 NUTM1Q86Y26 1132 aa6.77□□□□□ -1.33
SMG1-212ENST00000566328 VSIG10Q8N0Z9 540 aa6.77□□□□□ -1.33
SMG1-212ENST00000566328 RC3H1Q5TC82 1133 aaKnown RBP6.76□□□□□ -1.33
SMG1-212ENST00000566328 J3QL48 77 aa6.75□□□□□ -1.33
SMG1-212ENST00000566328 JUNDP17535 347 aa6.75□□□□□ -1.33
SMG1-212ENST00000566328 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
SMG1-212ENST00000566328 CCDC102AQ96A19 550 aa6.75□□□□□ -1.33
SMG1-212ENST00000566328 KIFC2Q96AC6 838 aa6.75□□□□□ -1.33
SMG1-212ENST00000566328 ATP13A2Q9NQ11 1180 aa6.75□□□□□ -1.33
SMG1-212ENST00000566328 RETREG3Q86VR2 466 aa6.74□□□□□ -1.33
SMG1-212ENST00000566328 HLA-CQ95604 372 aa6.74□□□□□ -1.33
SMG1-212ENST00000566328 FAM217BQ9NTX9 383 aaPredicted RBP6.74□□□□□ -1.33
SMG1-212ENST00000566328 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
SMG1-212ENST00000566328 TRIM47Q96LD4 638 aa6.73□□□□□ -1.33
SMG1-212ENST00000566328 HPS1Q92902 700 aa6.72□□□□□ -1.33
SMG1-212ENST00000566328 NUDT12Q9BQG2 462 aa6.72□□□□□ -1.33
SMG1-212ENST00000566328 C6orf229H3BNL8 230 aa6.71□□□□□ -1.34
SMG1-212ENST00000566328 ALDH1A1P00352 501 aa6.71□□□□□ -1.34
SMG1-212ENST00000566328 SKOR1P84550 965 aa6.71□□□□□ -1.34
SMG1-212ENST00000566328 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
SMG1-212ENST00000566328 EHBP1Q8NDI1 1231 aa6.71□□□□□ -1.34
SMG1-212ENST00000566328 FDX1P10109 184 aa6.7□□□□□ -1.34
SMG1-212ENST00000566328 MS4A1P11836 297 aa6.7□□□□□ -1.34
SMG1-212ENST00000566328 SYMPKQ92797 1274 aaKnown RBP6.7□□□□□ -1.34
SMG1-212ENST00000566328 TERTO14746 1132 aaKnown RBP6.69□□□□□ -1.34
SMG1-212ENST00000566328 CCNYL3P0C7X3 344 aa6.69□□□□□ -1.34
SMG1-212ENST00000566328 SNRPBP14678 240 aaKnown RBP6.69□□□□□ -1.34
SMG1-212ENST00000566328 WASF2Q9Y6W5 498 aa6.69□□□□□ -1.34
SMG1-212ENST00000566328 SSTR3P32745 418 aaPredicted RBP6.68□□□□□ -1.34
SMG1-212ENST00000566328 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
SMG1-212ENST00000566328 PTPRNQ16849 979 aa6.67□□□□□ -1.34
SMG1-212ENST00000566328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMG1-212ENST00000566328 SLC16A10Q8TF71 515 aa6.67□□□□□ -1.34
SMG1-212ENST00000566328 SIAH2O43255 324 aa6.66□□□□□ -1.34
SMG1-212ENST00000566328 TTLL12Q14166 644 aaPredicted RBP6.66□□□□□ -1.34
SMG1-212ENST00000566328 PTCRAQ6ISU1 281 aaPredicted RBP6.66□□□□□ -1.34
SMG1-212ENST00000566328 PCDHGC3Q9UN70 934 aa6.66□□□□□ -1.34
SMG1-212ENST00000566328 PLEKHG3A1L390 1219 aa6.65□□□□□ -1.34
SMG1-212ENST00000566328 CAPN5O15484 640 aaPredicted RBP6.65□□□□□ -1.34
SMG1-212ENST00000566328 DIXDC1Q155Q3 683 aa6.65□□□□□ -1.34
SMG1-212ENST00000566328 DESI1Q6ICB0 168 aa6.65□□□□□ -1.34
SMG1-212ENST00000566328 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
SMG1-212ENST00000566328 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.34
SMG1-212ENST00000566328 SH3BP2P78314 561 aa6.64□□□□□ -1.35
SMG1-212ENST00000566328 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 VARSP26640 1264 aaKnown RBP6.63□□□□□ -1.35
SMG1-212ENST00000566328 GJA5P36382 358 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 MTMR2Q13614 643 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 BARGINQ6ZT62 677 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 NPAS3Q8IXF0 933 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 PRR7Q8TB68 274 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 UNC93B1Q9H1C4 597 aa6.63□□□□□ -1.35
SMG1-212ENST00000566328 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
SMG1-212ENST00000566328 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
SMG1-212ENST00000566328 MOXD2PA6NHM9 499 aa6.62□□□□□ -1.35
SMG1-212ENST00000566328 NDUFV2P19404 249 aa6.62□□□□□ -1.35
SMG1-212ENST00000566328 AMHR2Q16671 573 aa6.62□□□□□ -1.35
SMG1-212ENST00000566328 MPNDQ8N594 471 aa6.62□□□□□ -1.35
SMG1-212ENST00000566328 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
SMG1-212ENST00000566328 BAP1Q92560 729 aa6.61□□□□□ -1.35
SMG1-212ENST00000566328 ZMYND10O75800 440 aa6.6□□□□□ -1.35
SMG1-212ENST00000566328 BMP1P13497 986 aa6.6□□□□□ -1.35
SMG1-212ENST00000566328 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms