RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 SRCAPQ6ZRS2 3230 aa20.25■□□□□ 0.83
COMMD4-214ENST00000566230 ATRNO75882 1429 aa20.25■□□□□ 0.83
COMMD4-214ENST00000566230 ATAD2Q6PL18 1390 aa20.24■□□□□ 0.83
COMMD4-214ENST00000566230 MYOM2P54296 1465 aa20.23■□□□□ 0.83
COMMD4-214ENST00000566230 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
COMMD4-214ENST00000566230 PXDNQ92626 1479 aa20.22■□□□□ 0.83
COMMD4-214ENST00000566230 CDC42BPGQ6DT37 1551 aa20.21■□□□□ 0.83
COMMD4-214ENST00000566230 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
COMMD4-214ENST00000566230 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
COMMD4-214ENST00000566230 BCL9LQ86UU0 1499 aa20.2■□□□□ 0.82
COMMD4-214ENST00000566230 EP400Q96L91 3159 aa20.2■□□□□ 0.82
COMMD4-214ENST00000566230 NPHP3Q7Z494 1330 aa20.2■□□□□ 0.82
COMMD4-214ENST00000566230 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-214ENST00000566230 ADGRF5Q8IZF2 1346 aa20.19■□□□□ 0.82
COMMD4-214ENST00000566230 FOXO3O43524 673 aa20.18■□□□□ 0.82
COMMD4-214ENST00000566230 FOXD1Q16676 465 aa20.16■□□□□ 0.82
COMMD4-214ENST00000566230 WAPLQ7Z5K2 1190 aa20.16■□□□□ 0.82
COMMD4-214ENST00000566230 STK26Q9P289 416 aa20.15■□□□□ 0.82
COMMD4-214ENST00000566230 TECPR2O15040 1411 aa20.14■□□□□ 0.81
COMMD4-214ENST00000566230 NUTM2FA1L443 756 aa20.14■□□□□ 0.81
COMMD4-214ENST00000566230 IFT172Q9UG01 1749 aa20.13■□□□□ 0.81
COMMD4-214ENST00000566230 GJD4Q96KN9 370 aaPredicted RBP20.13■□□□□ 0.81
COMMD4-214ENST00000566230 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
COMMD4-214ENST00000566230 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
COMMD4-214ENST00000566230 RGL3Q3MIN7 710 aa20.12■□□□□ 0.81
COMMD4-214ENST00000566230 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
COMMD4-214ENST00000566230 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
COMMD4-214ENST00000566230 ABCC11Q96J66 1382 aa20.11■□□□□ 0.81
COMMD4-214ENST00000566230 FMN2Q9NZ56 1722 aa20.11■□□□□ 0.81
COMMD4-214ENST00000566230 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
COMMD4-214ENST00000566230 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
COMMD4-214ENST00000566230 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
COMMD4-214ENST00000566230 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
COMMD4-214ENST00000566230 GLI3P10071 1580 aa20.09■□□□□ 0.81
COMMD4-214ENST00000566230 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
COMMD4-214ENST00000566230 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-214ENST00000566230 SLIT2O94813 1529 aa20.08■□□□□ 0.81
COMMD4-214ENST00000566230 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.8
COMMD4-214ENST00000566230 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.8
COMMD4-214ENST00000566230 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.8
COMMD4-214ENST00000566230 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
COMMD4-214ENST00000566230 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
COMMD4-214ENST00000566230 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
COMMD4-214ENST00000566230 PIK3C2GO75747 1445 aa20.05■□□□□ 0.8
COMMD4-214ENST00000566230 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
COMMD4-214ENST00000566230 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
COMMD4-214ENST00000566230 USP32Q8NFA0 1604 aa20.04■□□□□ 0.8
COMMD4-214ENST00000566230 MPHOSPH9Q99550 1183 aa20.03■□□□□ 0.8
COMMD4-214ENST00000566230 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
COMMD4-214ENST00000566230 CABLES1Q8TDN4 633 aa20■□□□□ 0.79
COMMD4-214ENST00000566230 BLMP54132 1417 aaPredicted RBP20■□□□□ 0.79
COMMD4-214ENST00000566230 C14orf93Q9H972 538 aaKnown RBP19.99■□□□□ 0.79
COMMD4-214ENST00000566230 PHF8Q9UPP1 1060 aa19.99■□□□□ 0.79
COMMD4-214ENST00000566230 PLCH1Q4KWH8 1693 aa19.98■□□□□ 0.79
COMMD4-214ENST00000566230 SEPT12Q8IYM1 358 aa19.98■□□□□ 0.79
COMMD4-214ENST00000566230 TNS3Q68CZ2 1445 aa19.98■□□□□ 0.79
COMMD4-214ENST00000566230 ABCA3Q99758 1704 aa19.97■□□□□ 0.79
COMMD4-214ENST00000566230 NWD2Q9ULI1 1742 aa19.97■□□□□ 0.79
COMMD4-214ENST00000566230 VPS72Q15906 364 aa19.97■□□□□ 0.79
COMMD4-214ENST00000566230 DEFB132Q7Z7B7 95 aa19.97■□□□□ 0.79
COMMD4-214ENST00000566230 ONECUT3O60422 494 aaPredicted RBP19.96■□□□□ 0.79
COMMD4-214ENST00000566230 PSME1Q06323 249 aa19.96■□□□□ 0.79
COMMD4-214ENST00000566230 NRXN1Q9ULB1 1477 aa19.95■□□□□ 0.78
COMMD4-214ENST00000566230 PLEKHG5O94827 1062 aa19.95■□□□□ 0.78
COMMD4-214ENST00000566230 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
COMMD4-214ENST00000566230 SBNO1A3KN83 1393 aa19.95■□□□□ 0.78
COMMD4-214ENST00000566230 HAP1P54257 671 aaPredicted RBP19.94■□□□□ 0.78
COMMD4-214ENST00000566230 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
COMMD4-214ENST00000566230 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
COMMD4-214ENST00000566230 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
COMMD4-214ENST00000566230 PRAM1Q96QH2 718 aa19.92■□□□□ 0.78
COMMD4-214ENST00000566230 LMOD2Q6P5Q4 547 aa19.91■□□□□ 0.78
COMMD4-214ENST00000566230 CCDC9Q9Y3X0 531 aaKnown RBP19.91■□□□□ 0.78
COMMD4-214ENST00000566230 KRT27Q7Z3Y8 459 aa19.9■□□□□ 0.78
COMMD4-214ENST00000566230 ARHGEF10O15013 1369 aa19.9■□□□□ 0.78
COMMD4-214ENST00000566230 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
COMMD4-214ENST00000566230 TRPM3Q9HCF6 1732 aaPredicted RBP19.89■□□□□ 0.77
COMMD4-214ENST00000566230 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
COMMD4-214ENST00000566230 SF3B2Q13435 895 aaKnown RBP19.88■□□□□ 0.77
COMMD4-214ENST00000566230 DLC1Q96QB1 1528 aa19.87■□□□□ 0.77
COMMD4-214ENST00000566230 ANKARQ7Z5J8 1434 aa19.87■□□□□ 0.77
COMMD4-214ENST00000566230 POGKQ9P215 609 aa19.86■□□□□ 0.77
COMMD4-214ENST00000566230 ADGRB2O60241 1585 aa19.86■□□□□ 0.77
COMMD4-214ENST00000566230 ALS2Q96Q42 1657 aa19.85■□□□□ 0.77
COMMD4-214ENST00000566230 LRP5O75197 1615 aa19.84■□□□□ 0.77
COMMD4-214ENST00000566230 ADGRB1O14514 1584 aa19.84■□□□□ 0.77
COMMD4-214ENST00000566230 PRR36Q9H6K5 1346 aa19.83■□□□□ 0.77
COMMD4-214ENST00000566230 FAM98CQ17RN3 349 aaKnown RBP19.83■□□□□ 0.77
COMMD4-214ENST00000566230 BTG4Q9NY30 223 aa19.83■□□□□ 0.77
COMMD4-214ENST00000566230 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
COMMD4-214ENST00000566230 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-214ENST00000566230 A0A0G2JS52 829 aa19.81■□□□□ 0.76
COMMD4-214ENST00000566230 MYT1Q01538 1121 aa19.81■□□□□ 0.76
COMMD4-214ENST00000566230 CRYBG1Q9Y4K1 1723 aa19.81■□□□□ 0.76
COMMD4-214ENST00000566230 PSDA5PKW4 1024 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-214ENST00000566230 TRAK1Q9UPV9 953 aa19.8■□□□□ 0.76
COMMD4-214ENST00000566230 MINK1Q8N4C8 1332 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-214ENST00000566230 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
COMMD4-214ENST00000566230 BAG6P46379 1132 aa19.79■□□□□ 0.76
COMMD4-214ENST00000566230 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms