RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
SF3B3-207ENST00000566095 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
SF3B3-207ENST00000566095 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
SF3B3-207ENST00000566095 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
SF3B3-207ENST00000566095 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
SF3B3-207ENST00000566095 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
SF3B3-207ENST00000566095 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
SF3B3-207ENST00000566095 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
SF3B3-207ENST00000566095 ROBO2Q9HCK4 1378 aa13.5□□□□□ -0.25
SF3B3-207ENST00000566095 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
SF3B3-207ENST00000566095 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
SF3B3-207ENST00000566095 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
SF3B3-207ENST00000566095 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
SF3B3-207ENST00000566095 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
SF3B3-207ENST00000566095 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
SF3B3-207ENST00000566095 WAPLQ7Z5K2 1190 aa13.48□□□□□ -0.25
SF3B3-207ENST00000566095 C14orf37Q86TY3 774 aa13.48□□□□□ -0.25
SF3B3-207ENST00000566095 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
SF3B3-207ENST00000566095 ANP32CO43423 234 aa13.46□□□□□ -0.25
SF3B3-207ENST00000566095 PROSER2Q86WR7 435 aaPredicted RBP13.46□□□□□ -0.25
SF3B3-207ENST00000566095 CDK19Q9BWU1 502 aa13.46□□□□□ -0.25
SF3B3-207ENST00000566095 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
SF3B3-207ENST00000566095 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
SF3B3-207ENST00000566095 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
SF3B3-207ENST00000566095 ADGRL3Q9HAR2 1447 aa13.45□□□□□ -0.26
SF3B3-207ENST00000566095 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
SF3B3-207ENST00000566095 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-207ENST00000566095 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
SF3B3-207ENST00000566095 ANKARQ7Z5J8 1434 aa13.44□□□□□ -0.26
SF3B3-207ENST00000566095 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
SF3B3-207ENST00000566095 DCCP43146 1447 aa13.43□□□□□ -0.26
SF3B3-207ENST00000566095 MIER1Q8N108 512 aa13.43□□□□□ -0.26
SF3B3-207ENST00000566095 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
SF3B3-207ENST00000566095 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
SF3B3-207ENST00000566095 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
SF3B3-207ENST00000566095 C19orf44Q9H6X5 657 aa13.41□□□□□ -0.26
SF3B3-207ENST00000566095 MSH6P52701 1360 aa13.41□□□□□ -0.26
SF3B3-207ENST00000566095 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
SF3B3-207ENST00000566095 ATP7BP35670 1465 aa13.41□□□□□ -0.26
SF3B3-207ENST00000566095 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
SF3B3-207ENST00000566095 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-207ENST00000566095 ATF3P18847 181 aa13.4□□□□□ -0.26
SF3B3-207ENST00000566095 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
SF3B3-207ENST00000566095 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-207ENST00000566095 CADPS2Q86UW7 1296 aa13.39□□□□□ -0.27
SF3B3-207ENST00000566095 PANK3Q9H999 370 aa13.39□□□□□ -0.27
SF3B3-207ENST00000566095 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
SF3B3-207ENST00000566095 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
SF3B3-207ENST00000566095 MYOM1P52179 1685 aa13.37□□□□□ -0.27
SF3B3-207ENST00000566095 NSD2O96028 1365 aa13.37□□□□□ -0.27
SF3B3-207ENST00000566095 NPC1L1Q9UHC9 1359 aa13.37□□□□□ -0.27
SF3B3-207ENST00000566095 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
SF3B3-207ENST00000566095 CGNL1Q0VF96 1302 aa13.37□□□□□ -0.27
SF3B3-207ENST00000566095 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
SF3B3-207ENST00000566095 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-207ENST00000566095 RALBP1Q15311 655 aa13.36□□□□□ -0.27
SF3B3-207ENST00000566095 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-207ENST00000566095 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
SF3B3-207ENST00000566095 SLC12A5Q9H2X9 1139 aa13.35□□□□□ -0.27
SF3B3-207ENST00000566095 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
SF3B3-207ENST00000566095 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-207ENST00000566095 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
SF3B3-207ENST00000566095 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
SF3B3-207ENST00000566095 USP32Q8NFA0 1604 aa13.33□□□□□ -0.28
SF3B3-207ENST00000566095 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
SF3B3-207ENST00000566095 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
SF3B3-207ENST00000566095 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
SF3B3-207ENST00000566095 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
SF3B3-207ENST00000566095 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
SF3B3-207ENST00000566095 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
SF3B3-207ENST00000566095 STRCP1A6NGW2 1772 aa13.31□□□□□ -0.28
SF3B3-207ENST00000566095 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
SF3B3-207ENST00000566095 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
SF3B3-207ENST00000566095 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
SF3B3-207ENST00000566095 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
SF3B3-207ENST00000566095 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
SF3B3-207ENST00000566095 PRR36Q9H6K5 1346 aa13.3□□□□□ -0.28
SF3B3-207ENST00000566095 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-207ENST00000566095 ACEP12821 1306 aa13.29□□□□□ -0.28
SF3B3-207ENST00000566095 INSRP06213 1382 aa13.29□□□□□ -0.28
SF3B3-207ENST00000566095 NUTM2FA1L443 756 aa13.28□□□□□ -0.28
SF3B3-207ENST00000566095 PSME1Q06323 249 aa13.28□□□□□ -0.28
SF3B3-207ENST00000566095 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
SF3B3-207ENST00000566095 C1orf167Q5SNV9 1468 aa13.28□□□□□ -0.28
SF3B3-207ENST00000566095 AKAP12Q02952 1782 aa13.27□□□□□ -0.28
SF3B3-207ENST00000566095 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
SF3B3-207ENST00000566095 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
SF3B3-207ENST00000566095 USP6P35125 1406 aa13.27□□□□□ -0.29
SF3B3-207ENST00000566095 MST1RQ04912 1400 aa13.27□□□□□ -0.29
SF3B3-207ENST00000566095 IQSEC2Q5JU85 1478 aa13.27□□□□□ -0.29
SF3B3-207ENST00000566095 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.29
SF3B3-207ENST00000566095 CC2D1BQ5T0F9 858 aaKnown RBP13.26□□□□□ -0.29
SF3B3-207ENST00000566095 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
SF3B3-207ENST00000566095 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
SF3B3-207ENST00000566095 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
SF3B3-207ENST00000566095 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
SF3B3-207ENST00000566095 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
SF3B3-207ENST00000566095 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
SF3B3-207ENST00000566095 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
SF3B3-207ENST00000566095 COG3Q96JB2 828 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms