RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 PRAM1Q96QH2 718 aa25.58■■□□□ 1.69
EDC3-208ENST00000565602 SBNO2Q9Y2G9 1366 aa25.57■■□□□ 1.68
EDC3-208ENST00000565602 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.57■■□□□ 1.68
EDC3-208ENST00000565602 WAPLQ7Z5K2 1190 aa25.56■■□□□ 1.68
EDC3-208ENST00000565602 CCER2I3L3R5 266 aa25.55■■□□□ 1.68
EDC3-208ENST00000565602 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
EDC3-208ENST00000565602 DMRT2Q9Y5R5 561 aa25.53■■□□□ 1.68
EDC3-208ENST00000565602 TULP4Q9NRJ4 1543 aa25.52■■□□□ 1.68
EDC3-208ENST00000565602 SAFB2Q14151 953 aaKnown RBP eCLIP25.52■■□□□ 1.68
EDC3-208ENST00000565602 POGKQ9P215 609 aa25.51■■□□□ 1.67
EDC3-208ENST00000565602 DISP3Q9P2K9 1392 aa25.51■■□□□ 1.67
EDC3-208ENST00000565602 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.67
EDC3-208ENST00000565602 ADGRB2O60241 1585 aa25.5■■□□□ 1.67
EDC3-208ENST00000565602 XIRP1Q702N8 1843 aaKnown RBP25.49■■□□□ 1.67
EDC3-208ENST00000565602 ZNF335Q9H4Z2 1342 aaPredicted RBP25.47■■□□□ 1.67
EDC3-208ENST00000565602 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
EDC3-208ENST00000565602 TMF1P82094 1093 aa25.43■■□□□ 1.66
EDC3-208ENST00000565602 RBM33Q96EV2 1170 aaKnown RBP25.42■■□□□ 1.66
EDC3-208ENST00000565602 MYOM1P52179 1685 aa25.41■■□□□ 1.66
EDC3-208ENST00000565602 SLC24A1O60721 1099 aa25.4■■□□□ 1.66
EDC3-208ENST00000565602 LRRC7Q96NW7 1537 aa25.4■■□□□ 1.66
EDC3-208ENST00000565602 LTBP4Q8N2S1 1624 aa25.4■■□□□ 1.66
EDC3-208ENST00000565602 ADGRL3Q9HAR2 1447 aa25.4■■□□□ 1.66
EDC3-208ENST00000565602 PROSER2Q86WR7 435 aaPredicted RBP25.39■■□□□ 1.66
EDC3-208ENST00000565602 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.65
EDC3-208ENST00000565602 POLR3GLQ9BT43 218 aa25.38■■□□□ 1.65
EDC3-208ENST00000565602 EVC2Q86UK5 1308 aa25.38■■□□□ 1.65
EDC3-208ENST00000565602 FMN2Q9NZ56 1722 aa25.38■■□□□ 1.65
EDC3-208ENST00000565602 TMEM94Q12767 1356 aa25.37■■□□□ 1.65
EDC3-208ENST00000565602 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
EDC3-208ENST00000565602 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
EDC3-208ENST00000565602 WASLO00401 505 aaPredicted RBP25.35■■□□□ 1.65
EDC3-208ENST00000565602 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
EDC3-208ENST00000565602 RGPD8O14715 1765 aaPredicted RBP25.34■■□□□ 1.65
EDC3-208ENST00000565602 PRKRIP1Q9H875 184 aaPredicted RBP25.34■■□□□ 1.65
EDC3-208ENST00000565602 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
EDC3-208ENST00000565602 CABP2Q9NPB3 220 aa25.32■■□□□ 1.64
EDC3-208ENST00000565602 TOPAZ1Q8N9V7 1692 aa25.32■■□□□ 1.64
EDC3-208ENST00000565602 CDCA8Q53HL2 280 aa25.32■■□□□ 1.64
EDC3-208ENST00000565602 PUS7Q96PZ0 661 aaKnown RBP25.32■■□□□ 1.64
EDC3-208ENST00000565602 ATP7BP35670 1465 aa25.31■■□□□ 1.64
EDC3-208ENST00000565602 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
EDC3-208ENST00000565602 PRR36Q9H6K5 1346 aa25.28■■□□□ 1.64
EDC3-208ENST00000565602 ITSN1Q15811 1721 aa25.27■■□□□ 1.64
EDC3-208ENST00000565602 DCCP43146 1447 aa25.26■■□□□ 1.63
EDC3-208ENST00000565602 ATAD2Q6PL18 1390 aa25.26■■□□□ 1.63
EDC3-208ENST00000565602 C14orf37Q86TY3 774 aa25.26■■□□□ 1.63
EDC3-208ENST00000565602 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
EDC3-208ENST00000565602 ANKARQ7Z5J8 1434 aa25.23■■□□□ 1.63
EDC3-208ENST00000565602 NUDT16Q96DE0 195 aaKnown RBP25.23■■□□□ 1.63
EDC3-208ENST00000565602 MSH6P52701 1360 aa25.21■■□□□ 1.63
EDC3-208ENST00000565602 NUTM2FA1L443 756 aa25.21■■□□□ 1.63
EDC3-208ENST00000565602 CD163L1Q9NR16 1453 aa25.2■■□□□ 1.62
EDC3-208ENST00000565602 PPIP5K1Q6PFW1 1433 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 SLC12A5Q9H2X9 1139 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 NINLQ9Y2I6 1382 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 AKAP12Q02952 1782 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 MST1RQ04912 1400 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 GTF3C3Q9Y5Q9 886 aa25.19■■□□□ 1.62
EDC3-208ENST00000565602 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
EDC3-208ENST00000565602 KTN1Q86UP2 1357 aaKnown RBP25.17■■□□□ 1.62
EDC3-208ENST00000565602 TMC1Q8TDI8 760 aa25.16■■□□□ 1.62
EDC3-208ENST00000565602 CABP1Q9NZU7 370 aa25.15■■□□□ 1.62
EDC3-208ENST00000565602 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
EDC3-208ENST00000565602 MON2Q7Z3U7 1717 aa25.15■■□□□ 1.62
EDC3-208ENST00000565602 ATF3P18847 181 aa25.14■■□□□ 1.61
EDC3-208ENST00000565602 CCDC184Q52MB2 194 aa25.13■■□□□ 1.61
EDC3-208ENST00000565602 CADPS2Q86UW7 1296 aa25.13■■□□□ 1.61
EDC3-208ENST00000565602 PANK3Q9H999 370 aa25.13■■□□□ 1.61
EDC3-208ENST00000565602 ANKRD36BQ8N2N9 1353 aa25.13■■□□□ 1.61
EDC3-208ENST00000565602 MRS2Q9HD23 443 aa25.13■■□□□ 1.61
EDC3-208ENST00000565602 A0A1W2PP64 1363 aa25.12■■□□□ 1.61
EDC3-208ENST00000565602 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
EDC3-208ENST00000565602 PLEKHG3A1L390 1219 aa25.11■■□□□ 1.61
EDC3-208ENST00000565602 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
EDC3-208ENST00000565602 PER1O15534 1290 aaPredicted RBP25.09■■□□□ 1.61
EDC3-208ENST00000565602 CARD14Q9BXL6 1004 aa25.09■■□□□ 1.61
EDC3-208ENST00000565602 NRKQ7Z2Y5 1582 aa25.09■■□□□ 1.61
EDC3-208ENST00000565602 POLR3AO14802 1390 aaPredicted RBP25.08■■□□□ 1.61
EDC3-208ENST00000565602 RALBP1Q15311 655 aa25.06■■□□□ 1.6
EDC3-208ENST00000565602 ORAI2Q96SN7 254 aa25.06■■□□□ 1.6
EDC3-208ENST00000565602 ACEP12821 1306 aa25.06■■□□□ 1.6
EDC3-208ENST00000565602 PMFBP1Q8TBY8 1022 aa25.06■■□□□ 1.6
EDC3-208ENST00000565602 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
EDC3-208ENST00000565602 PARD3Q8TEW0 1356 aa25.05■■□□□ 1.6
EDC3-208ENST00000565602 CNGB1Q14028 1251 aaPredicted RBP25.05■■□□□ 1.6
EDC3-208ENST00000565602 ESCO1Q5FWF5 840 aa25.04■■□□□ 1.6
EDC3-208ENST00000565602 TERF2IPQ9NYB0 399 aa25.04■■□□□ 1.6
EDC3-208ENST00000565602 PHF8Q9UPP1 1060 aa25.04■■□□□ 1.6
EDC3-208ENST00000565602 NSD3Q9BZ95 1437 aa25.04■■□□□ 1.6
EDC3-208ENST00000565602 MYBBP1AQ9BQG0 1328 aaKnown RBP25.03■■□□□ 1.6
EDC3-208ENST00000565602 SLAIN2Q9P270 581 aa25.02■■□□□ 1.6
EDC3-208ENST00000565602 HDGFL2Q7Z4V5 671 aaPredicted RBP25.02■■□□□ 1.6
EDC3-208ENST00000565602 KIF20BQ96Q89 1820 aa25.01■■□□□ 1.59
EDC3-208ENST00000565602 USP6P35125 1406 aa25.01■■□□□ 1.59
EDC3-208ENST00000565602 SSH2Q76I76 1423 aa25.01■■□□□ 1.59
EDC3-208ENST00000565602 HNRNPUQ00839 825 aaKnown RBP eCLIP25■■□□□ 1.59
EDC3-208ENST00000565602 FAM9BQ8IZU0 186 aa24.99■■□□□ 1.59
EDC3-208ENST00000565602 TRPM3Q9HCF6 1732 aaPredicted RBP24.99■■□□□ 1.59
EDC3-208ENST00000565602 BRD4O60885 1362 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms