RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
SPG7-211ENST00000565370 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
SPG7-211ENST00000565370 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
SPG7-211ENST00000565370 CFAP70Q5T0N1 1121 aa17.86■□□□□ 0.45
SPG7-211ENST00000565370 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
SPG7-211ENST00000565370 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
SPG7-211ENST00000565370 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
SPG7-211ENST00000565370 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
SPG7-211ENST00000565370 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
SPG7-211ENST00000565370 KIF1AQ12756 1690 aa17.82■□□□□ 0.44
SPG7-211ENST00000565370 ADGRB2O60241 1585 aa17.82■□□□□ 0.44
SPG7-211ENST00000565370 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
SPG7-211ENST00000565370 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
SPG7-211ENST00000565370 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
SPG7-211ENST00000565370 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
SPG7-211ENST00000565370 POGKQ9P215 609 aa17.78■□□□□ 0.44
SPG7-211ENST00000565370 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
SPG7-211ENST00000565370 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
SPG7-211ENST00000565370 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
SPG7-211ENST00000565370 NPHP3Q7Z494 1330 aa17.75■□□□□ 0.43
SPG7-211ENST00000565370 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
SPG7-211ENST00000565370 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
SPG7-211ENST00000565370 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
SPG7-211ENST00000565370 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
SPG7-211ENST00000565370 LRP6O75581 1613 aa17.75■□□□□ 0.43
SPG7-211ENST00000565370 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
SPG7-211ENST00000565370 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
SPG7-211ENST00000565370 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
SPG7-211ENST00000565370 NUTM2FA1L443 756 aa17.72■□□□□ 0.43
SPG7-211ENST00000565370 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
SPG7-211ENST00000565370 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
SPG7-211ENST00000565370 PXDNQ92626 1479 aa17.71■□□□□ 0.43
SPG7-211ENST00000565370 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
SPG7-211ENST00000565370 COL22A1Q8NFW1 1626 aaPredicted RBP17.7■□□□□ 0.42
SPG7-211ENST00000565370 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
SPG7-211ENST00000565370 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
SPG7-211ENST00000565370 RGPD8O14715 1765 aaPredicted RBP17.68■□□□□ 0.42
SPG7-211ENST00000565370 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
SPG7-211ENST00000565370 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
SPG7-211ENST00000565370 MINK1Q8N4C8 1332 aaPredicted RBP17.68■□□□□ 0.42
SPG7-211ENST00000565370 NUTM2BA6NNL0 878 aaPredicted RBP17.67■□□□□ 0.42
SPG7-211ENST00000565370 NUTM2EB1AL46 878 aaPredicted RBP17.67■□□□□ 0.42
SPG7-211ENST00000565370 NUTM2AQ8IVF1 878 aaPredicted RBP17.67■□□□□ 0.42
SPG7-211ENST00000565370 L3MBTL2Q969R5 705 aa17.67■□□□□ 0.42
SPG7-211ENST00000565370 SIN3AQ96ST3 1273 aa17.67■□□□□ 0.42
SPG7-211ENST00000565370 FOXO3O43524 673 aa17.66■□□□□ 0.42
SPG7-211ENST00000565370 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPG7-211ENST00000565370 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
SPG7-211ENST00000565370 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
SPG7-211ENST00000565370 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
SPG7-211ENST00000565370 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.42
SPG7-211ENST00000565370 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
SPG7-211ENST00000565370 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
SPG7-211ENST00000565370 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
SPG7-211ENST00000565370 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
SPG7-211ENST00000565370 XPCQ01831 940 aaPredicted RBP17.62■□□□□ 0.41
SPG7-211ENST00000565370 ATP7BP35670 1465 aa17.62■□□□□ 0.41
SPG7-211ENST00000565370 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
SPG7-211ENST00000565370 PSME1Q06323 249 aa17.61■□□□□ 0.41
SPG7-211ENST00000565370 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
SPG7-211ENST00000565370 CENPJQ9HC77 1338 aaPredicted RBP17.6■□□□□ 0.41
SPG7-211ENST00000565370 MARF1Q9Y4F3 1742 aaKnown RBP17.6■□□□□ 0.41
SPG7-211ENST00000565370 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
SPG7-211ENST00000565370 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
SPG7-211ENST00000565370 GPRASP1Q5JY77 1395 aa17.59■□□□□ 0.41
SPG7-211ENST00000565370 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
SPG7-211ENST00000565370 AFF2P51816 1311 aa17.58■□□□□ 0.4
SPG7-211ENST00000565370 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
SPG7-211ENST00000565370 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
SPG7-211ENST00000565370 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
SPG7-211ENST00000565370 TRPM3Q9HCF6 1732 aaPredicted RBP17.57■□□□□ 0.4
SPG7-211ENST00000565370 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
SPG7-211ENST00000565370 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
SPG7-211ENST00000565370 PRR36Q9H6K5 1346 aa17.56■□□□□ 0.4
SPG7-211ENST00000565370 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
SPG7-211ENST00000565370 HAP1P54257 671 aaPredicted RBP17.54■□□□□ 0.4
SPG7-211ENST00000565370 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
SPG7-211ENST00000565370 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
SPG7-211ENST00000565370 ALS2Q96Q42 1657 aa17.54■□□□□ 0.4
SPG7-211ENST00000565370 RXRBP28702 533 aa17.53■□□□□ 0.4
SPG7-211ENST00000565370 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
SPG7-211ENST00000565370 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
SPG7-211ENST00000565370 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
SPG7-211ENST00000565370 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
SPG7-211ENST00000565370 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
SPG7-211ENST00000565370 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
SPG7-211ENST00000565370 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
SPG7-211ENST00000565370 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
SPG7-211ENST00000565370 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
SPG7-211ENST00000565370 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
SPG7-211ENST00000565370 CARD11Q9BXL7 1154 aa17.48■□□□□ 0.39
SPG7-211ENST00000565370 USP21Q9UK80 565 aa17.48■□□□□ 0.39
SPG7-211ENST00000565370 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
SPG7-211ENST00000565370 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
SPG7-211ENST00000565370 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
SPG7-211ENST00000565370 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
SPG7-211ENST00000565370 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
SPG7-211ENST00000565370 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
SPG7-211ENST00000565370 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
SPG7-211ENST00000565370 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms