RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
RPAP1-206ENST00000564934 SPHKAPQ2M3C7 1700 aa20.31■□□□□ 0.84
RPAP1-206ENST00000564934 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
RPAP1-206ENST00000564934 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
RPAP1-206ENST00000564934 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
RPAP1-206ENST00000564934 PXDNQ92626 1479 aa20.29■□□□□ 0.84
RPAP1-206ENST00000564934 NPHP3Q7Z494 1330 aa20.28■□□□□ 0.84
RPAP1-206ENST00000564934 SLIT2O94813 1529 aa20.28■□□□□ 0.84
RPAP1-206ENST00000564934 ROBO2Q9HCK4 1378 aa20.27■□□□□ 0.84
RPAP1-206ENST00000564934 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
RPAP1-206ENST00000564934 YY1P25490 414 aa20.25■□□□□ 0.83
RPAP1-206ENST00000564934 BAG6P46379 1132 aa20.25■□□□□ 0.83
RPAP1-206ENST00000564934 FAM50AQ14320 339 aaKnown RBP20.25■□□□□ 0.83
RPAP1-206ENST00000564934 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
RPAP1-206ENST00000564934 KRT27Q7Z3Y8 459 aa20.23■□□□□ 0.83
RPAP1-206ENST00000564934 FOXO3O43524 673 aa20.22■□□□□ 0.83
RPAP1-206ENST00000564934 APLP2Q06481 763 aa20.22■□□□□ 0.83
RPAP1-206ENST00000564934 NEXMIFQ5QGS0 1516 aa20.22■□□□□ 0.83
RPAP1-206ENST00000564934 NUP155O75694 1391 aa20.21■□□□□ 0.83
RPAP1-206ENST00000564934 R3HDM1Q15032 1099 aaKnown RBP20.2■□□□□ 0.82
RPAP1-206ENST00000564934 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
RPAP1-206ENST00000564934 VPS72Q15906 364 aa20.18■□□□□ 0.82
RPAP1-206ENST00000564934 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
RPAP1-206ENST00000564934 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
RPAP1-206ENST00000564934 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
RPAP1-206ENST00000564934 HFM1A2PYH4 1435 aa20.17■□□□□ 0.82
RPAP1-206ENST00000564934 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
RPAP1-206ENST00000564934 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
RPAP1-206ENST00000564934 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
RPAP1-206ENST00000564934 A0A0G2JS52 829 aa20.15■□□□□ 0.82
RPAP1-206ENST00000564934 MYT1Q01538 1121 aa20.15■□□□□ 0.82
RPAP1-206ENST00000564934 SPATA31A3Q5VYP0 1347 aa20.12■□□□□ 0.81
RPAP1-206ENST00000564934 PLCH1Q4KWH8 1693 aa20.11■□□□□ 0.81
RPAP1-206ENST00000564934 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
RPAP1-206ENST00000564934 NUTM2FA1L443 756 aa20.11■□□□□ 0.81
RPAP1-206ENST00000564934 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
RPAP1-206ENST00000564934 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
RPAP1-206ENST00000564934 RGPD1P0DJD0 1748 aa20.09■□□□□ 0.81
RPAP1-206ENST00000564934 NWD2Q9ULI1 1742 aa20.09■□□□□ 0.81
RPAP1-206ENST00000564934 ROCK1Q13464 1354 aa20.08■□□□□ 0.81
RPAP1-206ENST00000564934 PLEKHG5O94827 1062 aa20.08■□□□□ 0.81
RPAP1-206ENST00000564934 CABLES1Q8TDN4 633 aa20.07■□□□□ 0.8
RPAP1-206ENST00000564934 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
RPAP1-206ENST00000564934 NAIPQ13075 1403 aa20.07■□□□□ 0.8
RPAP1-206ENST00000564934 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
RPAP1-206ENST00000564934 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
RPAP1-206ENST00000564934 FAM98CQ17RN3 349 aaKnown RBP20.06■□□□□ 0.8
RPAP1-206ENST00000564934 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
RPAP1-206ENST00000564934 EZH2Q15910 746 aaKnown RBP20.04■□□□□ 0.8
RPAP1-206ENST00000564934 TNS3Q68CZ2 1445 aa20.03■□□□□ 0.8
RPAP1-206ENST00000564934 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
RPAP1-206ENST00000564934 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
RPAP1-206ENST00000564934 KIF1BO60333 1816 aa20.02■□□□□ 0.8
RPAP1-206ENST00000564934 KIF1AQ12756 1690 aa20.01■□□□□ 0.79
RPAP1-206ENST00000564934 FAM83GA6ND36 823 aa20.01■□□□□ 0.79
RPAP1-206ENST00000564934 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
RPAP1-206ENST00000564934 WAPLQ7Z5K2 1190 aa19.99■□□□□ 0.79
RPAP1-206ENST00000564934 CAMKK2Q96RR4 588 aa19.98■□□□□ 0.79
RPAP1-206ENST00000564934 ADGRB2O60241 1585 aa19.98■□□□□ 0.79
RPAP1-206ENST00000564934 NRAPQ86VF7 1730 aa19.98■□□□□ 0.79
RPAP1-206ENST00000564934 DCAF8L1A6NGE4 600 aa19.97■□□□□ 0.79
RPAP1-206ENST00000564934 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
RPAP1-206ENST00000564934 FMN2Q9NZ56 1722 aa19.96■□□□□ 0.79
RPAP1-206ENST00000564934 PSME1Q06323 249 aa19.95■□□□□ 0.78
RPAP1-206ENST00000564934 IFFO2Q5TF58 517 aa19.95■□□□□ 0.78
RPAP1-206ENST00000564934 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
RPAP1-206ENST00000564934 STK26Q9P289 416 aa19.95■□□□□ 0.78
RPAP1-206ENST00000564934 PPP1R1BQ9UD71 204 aaPredicted RBP19.95■□□□□ 0.78
RPAP1-206ENST00000564934 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
RPAP1-206ENST00000564934 RPGRIP1LQ68CZ1 1315 aa19.94■□□□□ 0.78
RPAP1-206ENST00000564934 ARHGEF10O15013 1369 aa19.94■□□□□ 0.78
RPAP1-206ENST00000564934 TECPR2O15040 1411 aa19.93■□□□□ 0.78
RPAP1-206ENST00000564934 TRIM37O94972 964 aa19.93■□□□□ 0.78
RPAP1-206ENST00000564934 SBNO1A3KN83 1393 aa19.93■□□□□ 0.78
RPAP1-206ENST00000564934 THSD7AQ9UPZ6 1657 aa19.92■□□□□ 0.78
RPAP1-206ENST00000564934 ITGAEP38570 1179 aa19.92■□□□□ 0.78
RPAP1-206ENST00000564934 PPLO60437 1756 aa19.92■□□□□ 0.78
RPAP1-206ENST00000564934 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
RPAP1-206ENST00000564934 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
RPAP1-206ENST00000564934 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
RPAP1-206ENST00000564934 APBA3O96018 575 aa19.91■□□□□ 0.78
RPAP1-206ENST00000564934 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
RPAP1-206ENST00000564934 SPATA31A5Q5VU36 1347 aa19.91■□□□□ 0.78
RPAP1-206ENST00000564934 SPATA31A7Q8IWB4 1347 aa19.91■□□□□ 0.78
RPAP1-206ENST00000564934 SPON1Q9HCB6 807 aa19.9■□□□□ 0.78
RPAP1-206ENST00000564934 ZNF784Q8NCA9 323 aaPredicted RBP19.89■□□□□ 0.77
RPAP1-206ENST00000564934 RREB1Q92766 1687 aa19.88■□□□□ 0.77
RPAP1-206ENST00000564934 FAM196AQ6ZSG2 479 aa19.88■□□□□ 0.77
RPAP1-206ENST00000564934 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
RPAP1-206ENST00000564934 NUP188Q5SRE5 1749 aa19.88■□□□□ 0.77
RPAP1-206ENST00000564934 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
RPAP1-206ENST00000564934 NRXN1Q9ULB1 1477 aa19.87■□□□□ 0.77
RPAP1-206ENST00000564934 NBPF8Q3BBV2 869 aa19.87■□□□□ 0.77
RPAP1-206ENST00000564934 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
RPAP1-206ENST00000564934 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
RPAP1-206ENST00000564934 KCNQ2O43526 872 aa19.86■□□□□ 0.77
RPAP1-206ENST00000564934 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
RPAP1-206ENST00000564934 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
RPAP1-206ENST00000564934 KNDC1Q76NI1 1749 aa19.85■□□□□ 0.77
RPAP1-206ENST00000564934 TMEM132EQ6IEE7 984 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms