RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 NINLQ9Y2I6 1382 aa34.08■■■■□ 3.05
LINC01003-201ENST00000564834 USP32Q8NFA0 1604 aa34.06■■■■□ 3.04
LINC01003-201ENST00000564834 ZBED9Q6R2W3 1325 aa34.06■■■■□ 3.04
LINC01003-201ENST00000564834 SLC12A5Q9H2X9 1139 aa34.06■■■■□ 3.04
LINC01003-201ENST00000564834 TECPR2O15040 1411 aa34.05■■■■□ 3.04
LINC01003-201ENST00000564834 ADAMTS13Q76LX8 1427 aa34.05■■■■□ 3.04
LINC01003-201ENST00000564834 MINK1Q8N4C8 1332 aaPredicted RBP34.05■■■■□ 3.04
LINC01003-201ENST00000564834 PLPPR3Q6T4P5 718 aa34.05■■■■□ 3.04
LINC01003-201ENST00000564834 ATAD2Q6PL18 1390 aa34.04■■■■□ 3.04
LINC01003-201ENST00000564834 LTKP29376 864 aa34.03■■■■□ 3.04
LINC01003-201ENST00000564834 CABP2Q9NPB3 220 aa34.03■■■■□ 3.04
LINC01003-201ENST00000564834 CPS1P31327 1500 aa34.03■■■■□ 3.04
LINC01003-201ENST00000564834 EID1Q9Y6B2 187 aa34.03■■■■□ 3.04
LINC01003-201ENST00000564834 NSD3Q9BZ95 1437 aa34.02■■■■□ 3.04
LINC01003-201ENST00000564834 ANKRD36BQ8N2N9 1353 aa34.02■■■■□ 3.04
LINC01003-201ENST00000564834 BCANQ96GW7 911 aa34.01■■■■□ 3.04
LINC01003-201ENST00000564834 TXNDC2Q86VQ3 553 aa34■■■■□ 3.03
LINC01003-201ENST00000564834 THEMISQ8N1K5 641 aaPredicted RBP34■■■■□ 3.03
LINC01003-201ENST00000564834 CEP170BQ9Y4F5 1589 aaPredicted RBP34■■■■□ 3.03
LINC01003-201ENST00000564834 FAM135BQ49AJ0 1406 aa34■■■■□ 3.03
LINC01003-201ENST00000564834 SRPK2P78362 688 aaKnown RBP34■■■■□ 3.03
LINC01003-201ENST00000564834 PPP2R1AP30153 589 aa33.99■■■■□ 3.03
LINC01003-201ENST00000564834 SIRT1Q96EB6 747 aa33.98■■■■□ 3.03
LINC01003-201ENST00000564834 MED14O60244 1454 aa33.98■■■■□ 3.03
LINC01003-201ENST00000564834 PLEKHH1Q9ULM0 1364 aa33.97■■■■□ 3.03
LINC01003-201ENST00000564834 WAPLQ7Z5K2 1190 aa33.95■■■■□ 3.03
LINC01003-201ENST00000564834 INSRP06213 1382 aa33.94■■■■□ 3.02
LINC01003-201ENST00000564834 SETD1BQ9UPS6 1966 aaKnown RBP33.94■■■■□ 3.02
LINC01003-201ENST00000564834 ZNF142P52746 1687 aaPredicted RBP33.94■■■■□ 3.02
LINC01003-201ENST00000564834 CDK19Q9BWU1 502 aa33.92■■■■□ 3.02
LINC01003-201ENST00000564834 DIP2AQ14689 1571 aa33.91■■■■□ 3.02
LINC01003-201ENST00000564834 CGNL1Q0VF96 1302 aa33.9■■■■□ 3.02
LINC01003-201ENST00000564834 A0A1W2PP64 1363 aa33.88■■■■□ 3.01
LINC01003-201ENST00000564834 NSD2O96028 1365 aa33.87■■■■□ 3.01
LINC01003-201ENST00000564834 CD163L1Q9NR16 1453 aa33.85■■■■□ 3.01
LINC01003-201ENST00000564834 TERF2IPQ9NYB0 399 aa33.84■■■■□ 3.01
LINC01003-201ENST00000564834 TBX22Q9Y458 520 aa33.83■■■■□ 3.01
LINC01003-201ENST00000564834 BLMP54132 1417 aaPredicted RBP33.83■■■■□ 3.01
LINC01003-201ENST00000564834 ROBO2Q9HCK4 1378 aa33.82■■■■□ 3.01
LINC01003-201ENST00000564834 WASLO00401 505 aaPredicted RBP33.81■■■■□ 3
LINC01003-201ENST00000564834 SLC26A8Q96RN1 970 aa33.8■■■■□ 3
LINC01003-201ENST00000564834 ADGRB2O60241 1585 aa33.8■■■■□ 3
LINC01003-201ENST00000564834 MORC1Q86VD1 984 aa33.8■■■■□ 3
LINC01003-201ENST00000564834 PTPRUQ92729 1446 aa33.79■■■■□ 3
LINC01003-201ENST00000564834 ATP7BP35670 1465 aa33.79■■■■□ 3
LINC01003-201ENST00000564834 ANKRD26Q9UPS8 1709 aa33.77■■■■□ 3
LINC01003-201ENST00000564834 HDGFL2Q7Z4V5 671 aaPredicted RBP33.76■■■■□ 3
LINC01003-201ENST00000564834 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.75■■■□□ 2.99
LINC01003-201ENST00000564834 PTCH1Q13635 1447 aa33.75■■■□□ 2.99
LINC01003-201ENST00000564834 CABP1Q9NZU7 370 aa33.75■■■□□ 2.99
LINC01003-201ENST00000564834 WDR43Q15061 677 aaKnown RBP eCLIP33.73■■■□□ 2.99
LINC01003-201ENST00000564834 POLR3AO14802 1390 aaPredicted RBP33.72■■■□□ 2.99
LINC01003-201ENST00000564834 XRN1Q8IZH2 1706 aaKnown RBP33.72■■■□□ 2.99
LINC01003-201ENST00000564834 KIF20BQ96Q89 1820 aa33.71■■■□□ 2.99
LINC01003-201ENST00000564834 PIK3R4Q99570 1358 aa33.7■■■□□ 2.98
LINC01003-201ENST00000564834 ADAMTS8Q9UP79 889 aa33.7■■■□□ 2.98
LINC01003-201ENST00000564834 SMG6Q86US8 1419 aaKnown RBP33.69■■■□□ 2.98
LINC01003-201ENST00000564834 AMOTL2Q9Y2J4 779 aa33.69■■■□□ 2.98
LINC01003-201ENST00000564834 PPIP5K1Q6PFW1 1433 aa33.68■■■□□ 2.98
LINC01003-201ENST00000564834 ANKLE2Q86XL3 938 aa33.67■■■□□ 2.98
LINC01003-201ENST00000564834 SUPT16HQ9Y5B9 1047 aaKnown RBP33.66■■■□□ 2.98
LINC01003-201ENST00000564834 CDC42BPGQ6DT37 1551 aa33.65■■■□□ 2.98
LINC01003-201ENST00000564834 NEFLP07196 543 aa33.65■■■□□ 2.98
LINC01003-201ENST00000564834 NUDT16Q96DE0 195 aaKnown RBP33.65■■■□□ 2.98
LINC01003-201ENST00000564834 CPSF1Q10570 1443 aaKnown RBP33.65■■■□□ 2.98
LINC01003-201ENST00000564834 CCDC61Q9Y6R9 512 aa33.63■■■□□ 2.97
LINC01003-201ENST00000564834 AKAP12Q02952 1782 aa33.63■■■□□ 2.97
LINC01003-201ENST00000564834 ITSN1Q15811 1721 aa33.62■■■□□ 2.97
LINC01003-201ENST00000564834 TOPAZ1Q8N9V7 1692 aa33.62■■■□□ 2.97
LINC01003-201ENST00000564834 MON2Q7Z3U7 1717 aa33.62■■■□□ 2.97
LINC01003-201ENST00000564834 FYB1O15117 783 aa33.62■■■□□ 2.97
LINC01003-201ENST00000564834 TNNT2P45379 298 aaPredicted RBP33.62■■■□□ 2.97
LINC01003-201ENST00000564834 SHPRHQ149N8 1683 aa33.61■■■□□ 2.97
LINC01003-201ENST00000564834 NUDCQ9Y266 331 aa33.61■■■□□ 2.97
LINC01003-201ENST00000564834 SENP3-EIF4A1A0A087X0R7 540 aa33.6■■■□□ 2.97
LINC01003-201ENST00000564834 EDC4Q6P2E9 1401 aaKnown RBP33.59■■■□□ 2.97
LINC01003-201ENST00000564834 CHD2O14647 1828 aaKnown RBP33.58■■■□□ 2.97
LINC01003-201ENST00000564834 GGNBP2Q9H3C7 697 aa33.58■■■□□ 2.97
LINC01003-201ENST00000564834 PRR36Q9H6K5 1346 aa33.56■■■□□ 2.96
LINC01003-201ENST00000564834 PDE3BQ13370 1112 aa33.56■■■□□ 2.96
LINC01003-201ENST00000564834 FKBP8Q14318 412 aa33.56■■■□□ 2.96
LINC01003-201ENST00000564834 MTHFSP49914 203 aa33.55■■■□□ 2.96
LINC01003-201ENST00000564834 CFAP53Q96M91 514 aa33.53■■■□□ 2.96
LINC01003-201ENST00000564834 NCKAP5LQ9HCH0 1330 aa33.5■■■□□ 2.95
LINC01003-201ENST00000564834 SALL2Q9Y467 1007 aaPredicted RBP33.5■■■□□ 2.95
LINC01003-201ENST00000564834 KCNA6P17658 529 aa33.49■■■□□ 2.95
LINC01003-201ENST00000564834 ZNF692Q9BU19 519 aaPredicted RBP33.49■■■□□ 2.95
LINC01003-201ENST00000564834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.47■■■□□ 2.95
LINC01003-201ENST00000564834 NPHP4O75161 1426 aaPredicted RBP33.47■■■□□ 2.95
LINC01003-201ENST00000564834 NRKQ7Z2Y5 1582 aa33.45■■■□□ 2.94
LINC01003-201ENST00000564834 PLEKHG3A1L390 1219 aa33.44■■■□□ 2.94
LINC01003-201ENST00000564834 NKTRP30414 1462 aaKnown RBP33.43■■■□□ 2.94
LINC01003-201ENST00000564834 RGPD8O14715 1765 aaPredicted RBP33.41■■■□□ 2.94
LINC01003-201ENST00000564834 COL3A1P02461 1466 aaPredicted RBP33.41■■■□□ 2.94
LINC01003-201ENST00000564834 CCDC146Q8IYE0 955 aa33.4■■■□□ 2.94
LINC01003-201ENST00000564834 FMN2Q9NZ56 1722 aa33.4■■■□□ 2.94
LINC01003-201ENST00000564834 MAP2P11137 1827 aaKnown RBP33.4■■■□□ 2.94
LINC01003-201ENST00000564834 ANKARQ7Z5J8 1434 aa33.39■■■□□ 2.94
LINC01003-201ENST00000564834 KDM4FA0A1W2PPD8 638 aa33.39■■■□□ 2.94
LINC01003-201ENST00000564834 NGEFQ8N5V2 710 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms