RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 HIRIP3Q9BW71 556 aaPredicted RBP13.79□□□□□ -0.2
SIN3A-205ENST00000564778 TULP4Q9NRJ4 1543 aa13.79□□□□□ -0.2
SIN3A-205ENST00000564778 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
SIN3A-205ENST00000564778 DISP3Q9P2K9 1392 aa13.78□□□□□ -0.2
SIN3A-205ENST00000564778 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
SIN3A-205ENST00000564778 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.77□□□□□ -0.21
SIN3A-205ENST00000564778 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
SIN3A-205ENST00000564778 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
SIN3A-205ENST00000564778 TMF1P82094 1093 aa13.76□□□□□ -0.21
SIN3A-205ENST00000564778 POGKQ9P215 609 aa13.76□□□□□ -0.21
SIN3A-205ENST00000564778 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
SIN3A-205ENST00000564778 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
SIN3A-205ENST00000564778 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
SIN3A-205ENST00000564778 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
SIN3A-205ENST00000564778 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
SIN3A-205ENST00000564778 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
SIN3A-205ENST00000564778 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
SIN3A-205ENST00000564778 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
SIN3A-205ENST00000564778 MYOM1P52179 1685 aa13.72□□□□□ -0.21
SIN3A-205ENST00000564778 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
SIN3A-205ENST00000564778 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.21
SIN3A-205ENST00000564778 UBAP1LF5GYI3 381 aa13.71□□□□□ -0.21
SIN3A-205ENST00000564778 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
SIN3A-205ENST00000564778 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
SIN3A-205ENST00000564778 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 ATP7BP35670 1465 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 DCCP43146 1447 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
SIN3A-205ENST00000564778 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
SIN3A-205ENST00000564778 WASLO00401 505 aaPredicted RBP13.68□□□□□ -0.22
SIN3A-205ENST00000564778 TOM1O60784 492 aa13.68□□□□□ -0.22
SIN3A-205ENST00000564778 TMEM94Q12767 1356 aa13.68□□□□□ -0.22
SIN3A-205ENST00000564778 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
SIN3A-205ENST00000564778 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
SIN3A-205ENST00000564778 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-205ENST00000564778 CDK19Q9BWU1 502 aa13.66□□□□□ -0.22
SIN3A-205ENST00000564778 ITSN1Q15811 1721 aa13.65□□□□□ -0.22
SIN3A-205ENST00000564778 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
SIN3A-205ENST00000564778 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
SIN3A-205ENST00000564778 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
SIN3A-205ENST00000564778 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
SIN3A-205ENST00000564778 C19orf44Q9H6X5 657 aa13.62□□□□□ -0.23
SIN3A-205ENST00000564778 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
SIN3A-205ENST00000564778 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
SIN3A-205ENST00000564778 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
SIN3A-205ENST00000564778 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
SIN3A-205ENST00000564778 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
SIN3A-205ENST00000564778 MSH6P52701 1360 aa13.6□□□□□ -0.23
SIN3A-205ENST00000564778 ANKRD36BQ8N2N9 1353 aa13.6□□□□□ -0.23
SIN3A-205ENST00000564778 MST1RQ04912 1400 aa13.6□□□□□ -0.23
SIN3A-205ENST00000564778 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
SIN3A-205ENST00000564778 NUDT16Q96DE0 195 aaKnown RBP13.6□□□□□ -0.23
SIN3A-205ENST00000564778 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
SIN3A-205ENST00000564778 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
SIN3A-205ENST00000564778 C14orf37Q86TY3 774 aa13.59□□□□□ -0.23
SIN3A-205ENST00000564778 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
SIN3A-205ENST00000564778 CPSF1Q10570 1443 aaKnown RBP13.58□□□□□ -0.24
SIN3A-205ENST00000564778 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
SIN3A-205ENST00000564778 MON2Q7Z3U7 1717 aa13.58□□□□□ -0.24
SIN3A-205ENST00000564778 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
SIN3A-205ENST00000564778 KIF1AQ12756 1690 aa13.57□□□□□ -0.24
SIN3A-205ENST00000564778 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
SIN3A-205ENST00000564778 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
SIN3A-205ENST00000564778 SLC12A5Q9H2X9 1139 aa13.57□□□□□ -0.24
SIN3A-205ENST00000564778 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
SIN3A-205ENST00000564778 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
SIN3A-205ENST00000564778 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
SIN3A-205ENST00000564778 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
SIN3A-205ENST00000564778 PANK3Q9H999 370 aa13.56□□□□□ -0.24
SIN3A-205ENST00000564778 NRKQ7Z2Y5 1582 aa13.56□□□□□ -0.24
SIN3A-205ENST00000564778 ATF3P18847 181 aa13.55□□□□□ -0.24
SIN3A-205ENST00000564778 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
SIN3A-205ENST00000564778 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
SIN3A-205ENST00000564778 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
SIN3A-205ENST00000564778 NSD3Q9BZ95 1437 aa13.54□□□□□ -0.24
SIN3A-205ENST00000564778 HSPA1LP34931 641 aa13.53□□□□□ -0.24
SIN3A-205ENST00000564778 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
SIN3A-205ENST00000564778 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
SIN3A-205ENST00000564778 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
SIN3A-205ENST00000564778 CARD14Q9BXL6 1004 aa13.52□□□□□ -0.25
SIN3A-205ENST00000564778 USP6P35125 1406 aa13.52□□□□□ -0.25
SIN3A-205ENST00000564778 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
SIN3A-205ENST00000564778 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
SIN3A-205ENST00000564778 NSD2O96028 1365 aa13.51□□□□□ -0.25
SIN3A-205ENST00000564778 ACEP12821 1306 aa13.51□□□□□ -0.25
SIN3A-205ENST00000564778 AMER1Q5JTC6 1135 aaPredicted RBP13.51□□□□□ -0.25
SIN3A-205ENST00000564778 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
SIN3A-205ENST00000564778 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
SIN3A-205ENST00000564778 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
SIN3A-205ENST00000564778 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
SIN3A-205ENST00000564778 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
SIN3A-205ENST00000564778 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
SIN3A-205ENST00000564778 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
SIN3A-205ENST00000564778 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
SIN3A-205ENST00000564778 USP54Q70EL1 1684 aa13.48□□□□□ -0.25
SIN3A-205ENST00000564778 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
SIN3A-205ENST00000564778 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
SIN3A-205ENST00000564778 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms