RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
SIN3A-205ENST00000564778 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
SIN3A-205ENST00000564778 ABCC9O60706 1549 aa19.71■□□□□ 0.75
SIN3A-205ENST00000564778 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
SIN3A-205ENST00000564778 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
SIN3A-205ENST00000564778 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
SIN3A-205ENST00000564778 NACADO15069 1562 aa19.14■□□□□ 0.65
SIN3A-205ENST00000564778 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
SIN3A-205ENST00000564778 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
SIN3A-205ENST00000564778 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
SIN3A-205ENST00000564778 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
SIN3A-205ENST00000564778 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
SIN3A-205ENST00000564778 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
SIN3A-205ENST00000564778 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
SIN3A-205ENST00000564778 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
SIN3A-205ENST00000564778 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SIN3A-205ENST00000564778 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
SIN3A-205ENST00000564778 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SIN3A-205ENST00000564778 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
SIN3A-205ENST00000564778 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
SIN3A-205ENST00000564778 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
SIN3A-205ENST00000564778 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
SIN3A-205ENST00000564778 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
SIN3A-205ENST00000564778 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
SIN3A-205ENST00000564778 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
SIN3A-205ENST00000564778 WIZO95785 1651 aa17.71■□□□□ 0.43
SIN3A-205ENST00000564778 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
SIN3A-205ENST00000564778 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
SIN3A-205ENST00000564778 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
SIN3A-205ENST00000564778 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
SIN3A-205ENST00000564778 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
SIN3A-205ENST00000564778 CCDC88BA6NC98 1476 aa17.34■□□□□ 0.37
SIN3A-205ENST00000564778 CFTRP13569 1480 aa17.15■□□□□ 0.34
SIN3A-205ENST00000564778 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
SIN3A-205ENST00000564778 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
SIN3A-205ENST00000564778 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
SIN3A-205ENST00000564778 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
SIN3A-205ENST00000564778 NESP48681 1621 aa17.03■□□□□ 0.32
SIN3A-205ENST00000564778 PDS5BQ9NTI5 1447 aa16.95■□□□□ 0.3
SIN3A-205ENST00000564778 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SIN3A-205ENST00000564778 CUX2O14529 1486 aa16.93■□□□□ 0.3
SIN3A-205ENST00000564778 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
SIN3A-205ENST00000564778 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
SIN3A-205ENST00000564778 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
SIN3A-205ENST00000564778 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
SIN3A-205ENST00000564778 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
SIN3A-205ENST00000564778 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
SIN3A-205ENST00000564778 CUX1P39880 1505 aa16.77■□□□□ 0.28
SIN3A-205ENST00000564778 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
SIN3A-205ENST00000564778 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
SIN3A-205ENST00000564778 TOP2BQ02880 1626 aa16.77■□□□□ 0.27
SIN3A-205ENST00000564778 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
SIN3A-205ENST00000564778 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
SIN3A-205ENST00000564778 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
SIN3A-205ENST00000564778 WDR62O43379 1518 aa16.73■□□□□ 0.27
SIN3A-205ENST00000564778 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
SIN3A-205ENST00000564778 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
SIN3A-205ENST00000564778 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
SIN3A-205ENST00000564778 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
SIN3A-205ENST00000564778 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
SIN3A-205ENST00000564778 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
SIN3A-205ENST00000564778 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
SIN3A-205ENST00000564778 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
SIN3A-205ENST00000564778 SOGA1O94964 1423 aa16.51■□□□□ 0.23
SIN3A-205ENST00000564778 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
SIN3A-205ENST00000564778 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
SIN3A-205ENST00000564778 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SIN3A-205ENST00000564778 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
SIN3A-205ENST00000564778 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
SIN3A-205ENST00000564778 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
SIN3A-205ENST00000564778 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
SIN3A-205ENST00000564778 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
SIN3A-205ENST00000564778 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
SIN3A-205ENST00000564778 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
SIN3A-205ENST00000564778 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
SIN3A-205ENST00000564778 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
SIN3A-205ENST00000564778 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIN3A-205ENST00000564778 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
SIN3A-205ENST00000564778 IGF1RP08069 1367 aa16.29■□□□□ 0.2
SIN3A-205ENST00000564778 CUL7Q14999 1698 aa16.28■□□□□ 0.2
SIN3A-205ENST00000564778 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
SIN3A-205ENST00000564778 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
SIN3A-205ENST00000564778 KIF21BO75037 1637 aa16.26■□□□□ 0.19
SIN3A-205ENST00000564778 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
SIN3A-205ENST00000564778 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
SIN3A-205ENST00000564778 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
SIN3A-205ENST00000564778 SNAPC4Q5SXM2 1469 aa16.21■□□□□ 0.19
SIN3A-205ENST00000564778 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
SIN3A-205ENST00000564778 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
SIN3A-205ENST00000564778 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
SIN3A-205ENST00000564778 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SIN3A-205ENST00000564778 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
SIN3A-205ENST00000564778 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
SIN3A-205ENST00000564778 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
SIN3A-205ENST00000564778 CHD1O14646 1710 aa16.06■□□□□ 0.16
SIN3A-205ENST00000564778 NUP160Q12769 1436 aa16.03■□□□□ 0.16
SIN3A-205ENST00000564778 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
SIN3A-205ENST00000564778 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.16
SIN3A-205ENST00000564778 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
SIN3A-205ENST00000564778 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms