RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
GTF3C1-204ENST00000564664 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
GTF3C1-204ENST00000564664 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
GTF3C1-204ENST00000564664 LAMC1P11047 1609 aa17.95■□□□□ 0.46
GTF3C1-204ENST00000564664 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
GTF3C1-204ENST00000564664 IFT172Q9UG01 1749 aa17.95■□□□□ 0.46
GTF3C1-204ENST00000564664 PNPLA6Q8IY17 1366 aa17.94■□□□□ 0.46
GTF3C1-204ENST00000564664 RXRBP28702 533 aa17.94■□□□□ 0.46
GTF3C1-204ENST00000564664 ESCO1Q5FWF5 840 aa17.94■□□□□ 0.46
GTF3C1-204ENST00000564664 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
GTF3C1-204ENST00000564664 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
GTF3C1-204ENST00000564664 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
GTF3C1-204ENST00000564664 YTHDC2Q9H6S0 1430 aaKnown RBP17.92■□□□□ 0.46
GTF3C1-204ENST00000564664 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
GTF3C1-204ENST00000564664 MYOM2P54296 1465 aa17.91■□□□□ 0.46
GTF3C1-204ENST00000564664 NRXN1Q9ULB1 1477 aa17.91■□□□□ 0.46
GTF3C1-204ENST00000564664 AFF2P51816 1311 aa17.91■□□□□ 0.46
GTF3C1-204ENST00000564664 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
GTF3C1-204ENST00000564664 C8orf37Q96NL8 207 aa17.89■□□□□ 0.45
GTF3C1-204ENST00000564664 NGLY1Q96IV0 654 aa17.88■□□□□ 0.45
GTF3C1-204ENST00000564664 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
GTF3C1-204ENST00000564664 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
GTF3C1-204ENST00000564664 FOXO3O43524 673 aa17.87■□□□□ 0.45
GTF3C1-204ENST00000564664 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
GTF3C1-204ENST00000564664 RBM6P78332 1123 aaKnown RBP17.86■□□□□ 0.45
GTF3C1-204ENST00000564664 PLEKHH1Q9ULM0 1364 aa17.86■□□□□ 0.45
GTF3C1-204ENST00000564664 ADAMTS2O95450 1211 aa17.85■□□□□ 0.45
GTF3C1-204ENST00000564664 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
GTF3C1-204ENST00000564664 POGKQ9P215 609 aa17.83■□□□□ 0.44
GTF3C1-204ENST00000564664 NUTM2FA1L443 756 aa17.82■□□□□ 0.44
GTF3C1-204ENST00000564664 DCAF11Q8TEB1 546 aa17.82■□□□□ 0.44
GTF3C1-204ENST00000564664 PRAM1Q96QH2 718 aa17.82■□□□□ 0.44
GTF3C1-204ENST00000564664 PXDNQ92626 1479 aa17.82■□□□□ 0.44
GTF3C1-204ENST00000564664 COL22A1Q8NFW1 1626 aaPredicted RBP17.81■□□□□ 0.44
GTF3C1-204ENST00000564664 PSME1Q06323 249 aa17.81■□□□□ 0.44
GTF3C1-204ENST00000564664 USP21Q9UK80 565 aa17.81■□□□□ 0.44
GTF3C1-204ENST00000564664 TRPC5Q9UL62 973 aaPredicted RBP17.81■□□□□ 0.44
GTF3C1-204ENST00000564664 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
GTF3C1-204ENST00000564664 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
GTF3C1-204ENST00000564664 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
GTF3C1-204ENST00000564664 DLC1Q96QB1 1528 aa17.8■□□□□ 0.44
GTF3C1-204ENST00000564664 KRT28Q7Z3Y7 464 aa17.79■□□□□ 0.44
GTF3C1-204ENST00000564664 FMN2Q9NZ56 1722 aa17.78■□□□□ 0.44
GTF3C1-204ENST00000564664 SPATA31A3Q5VYP0 1347 aa17.78■□□□□ 0.44
GTF3C1-204ENST00000564664 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
GTF3C1-204ENST00000564664 KIF1AQ12756 1690 aa17.77■□□□□ 0.43
GTF3C1-204ENST00000564664 SAFB2Q14151 953 aaKnown RBP eCLIP17.76■□□□□ 0.43
GTF3C1-204ENST00000564664 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
GTF3C1-204ENST00000564664 ANKARQ7Z5J8 1434 aa17.75■□□□□ 0.43
GTF3C1-204ENST00000564664 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
GTF3C1-204ENST00000564664 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
GTF3C1-204ENST00000564664 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
GTF3C1-204ENST00000564664 ATRNO75882 1429 aa17.72■□□□□ 0.43
GTF3C1-204ENST00000564664 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-204ENST00000564664 RGS12O14924 1447 aa17.71■□□□□ 0.43
GTF3C1-204ENST00000564664 BCL9LQ86UU0 1499 aa17.7■□□□□ 0.42
GTF3C1-204ENST00000564664 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
GTF3C1-204ENST00000564664 UNC5CLQ8IV45 518 aa17.7■□□□□ 0.42
GTF3C1-204ENST00000564664 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
GTF3C1-204ENST00000564664 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
GTF3C1-204ENST00000564664 GJD4Q96KN9 370 aaPredicted RBP17.69■□□□□ 0.42
GTF3C1-204ENST00000564664 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
GTF3C1-204ENST00000564664 RGPD8O14715 1765 aaPredicted RBP17.68■□□□□ 0.42
GTF3C1-204ENST00000564664 MINK1Q8N4C8 1332 aaPredicted RBP17.68■□□□□ 0.42
GTF3C1-204ENST00000564664 GPRASP1Q5JY77 1395 aa17.67■□□□□ 0.42
GTF3C1-204ENST00000564664 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
GTF3C1-204ENST00000564664 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
GTF3C1-204ENST00000564664 HIRIP3Q9BW71 556 aaPredicted RBP17.67■□□□□ 0.42
GTF3C1-204ENST00000564664 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
GTF3C1-204ENST00000564664 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
GTF3C1-204ENST00000564664 SLIT2O94813 1529 aa17.65■□□□□ 0.42
GTF3C1-204ENST00000564664 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
GTF3C1-204ENST00000564664 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
GTF3C1-204ENST00000564664 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
GTF3C1-204ENST00000564664 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
GTF3C1-204ENST00000564664 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
GTF3C1-204ENST00000564664 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
GTF3C1-204ENST00000564664 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
GTF3C1-204ENST00000564664 VPS72Q15906 364 aa17.61■□□□□ 0.41
GTF3C1-204ENST00000564664 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
GTF3C1-204ENST00000564664 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
GTF3C1-204ENST00000564664 CDK19Q9BWU1 502 aa17.6■□□□□ 0.41
GTF3C1-204ENST00000564664 FAM83GA6ND36 823 aa17.59■□□□□ 0.41
GTF3C1-204ENST00000564664 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
GTF3C1-204ENST00000564664 CCDC61Q9Y6R9 512 aa17.59■□□□□ 0.41
GTF3C1-204ENST00000564664 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
GTF3C1-204ENST00000564664 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
GTF3C1-204ENST00000564664 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
GTF3C1-204ENST00000564664 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
GTF3C1-204ENST00000564664 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
GTF3C1-204ENST00000564664 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-204ENST00000564664 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
GTF3C1-204ENST00000564664 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
GTF3C1-204ENST00000564664 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
GTF3C1-204ENST00000564664 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
GTF3C1-204ENST00000564664 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
GTF3C1-204ENST00000564664 CENPJQ9HC77 1338 aaPredicted RBP17.53■□□□□ 0.4
GTF3C1-204ENST00000564664 ATP7BP35670 1465 aa17.53■□□□□ 0.4
GTF3C1-204ENST00000564664 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
GTF3C1-204ENST00000564664 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms