RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC2L-207ENST00000564404 FMN2Q9NZ56 1722 aa17.73■□□□□ 0.43
TRAPPC2L-207ENST00000564404 C14orf93Q9H972 538 aaKnown RBP17.73■□□□□ 0.43
TRAPPC2L-207ENST00000564404 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
TRAPPC2L-207ENST00000564404 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
TRAPPC2L-207ENST00000564404 LRP6O75581 1613 aa17.72■□□□□ 0.43
TRAPPC2L-207ENST00000564404 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
TRAPPC2L-207ENST00000564404 PLEKHH1Q9ULM0 1364 aa17.72■□□□□ 0.43
TRAPPC2L-207ENST00000564404 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
TRAPPC2L-207ENST00000564404 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
TRAPPC2L-207ENST00000564404 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
TRAPPC2L-207ENST00000564404 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
TRAPPC2L-207ENST00000564404 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC2L-207ENST00000564404 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC2L-207ENST00000564404 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC2L-207ENST00000564404 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
TRAPPC2L-207ENST00000564404 ESCO1Q5FWF5 840 aa17.67■□□□□ 0.42
TRAPPC2L-207ENST00000564404 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
TRAPPC2L-207ENST00000564404 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAPPC2L-207ENST00000564404 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
TRAPPC2L-207ENST00000564404 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
TRAPPC2L-207ENST00000564404 DLC1Q96QB1 1528 aa17.65■□□□□ 0.42
TRAPPC2L-207ENST00000564404 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
TRAPPC2L-207ENST00000564404 PRAM1Q96QH2 718 aa17.64■□□□□ 0.41
TRAPPC2L-207ENST00000564404 POGKQ9P215 609 aa17.64■□□□□ 0.41
TRAPPC2L-207ENST00000564404 ARHGEF28Q8N1W1 1705 aaKnown RBP17.64■□□□□ 0.41
TRAPPC2L-207ENST00000564404 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
TRAPPC2L-207ENST00000564404 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
TRAPPC2L-207ENST00000564404 SOS2Q07890 1332 aaPredicted RBP17.63■□□□□ 0.41
TRAPPC2L-207ENST00000564404 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
TRAPPC2L-207ENST00000564404 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
TRAPPC2L-207ENST00000564404 FOXO3O43524 673 aa17.6■□□□□ 0.41
TRAPPC2L-207ENST00000564404 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC2L-207ENST00000564404 PXDNQ92626 1479 aa17.6■□□□□ 0.41
TRAPPC2L-207ENST00000564404 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
TRAPPC2L-207ENST00000564404 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC2L-207ENST00000564404 MARF1Q9Y4F3 1742 aaKnown RBP17.59■□□□□ 0.41
TRAPPC2L-207ENST00000564404 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC2L-207ENST00000564404 USP32Q8NFA0 1604 aa17.58■□□□□ 0.41
TRAPPC2L-207ENST00000564404 AFF2P51816 1311 aa17.57■□□□□ 0.4
TRAPPC2L-207ENST00000564404 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
TRAPPC2L-207ENST00000564404 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
TRAPPC2L-207ENST00000564404 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC2L-207ENST00000564404 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC2L-207ENST00000564404 PHF8Q9UPP1 1060 aa17.54■□□□□ 0.4
TRAPPC2L-207ENST00000564404 ITSN1Q15811 1721 aa17.54■□□□□ 0.4
TRAPPC2L-207ENST00000564404 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRAPPC2L-207ENST00000564404 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
TRAPPC2L-207ENST00000564404 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
TRAPPC2L-207ENST00000564404 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.39
TRAPPC2L-207ENST00000564404 KRT28Q7Z3Y7 464 aa17.51■□□□□ 0.39
TRAPPC2L-207ENST00000564404 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
TRAPPC2L-207ENST00000564404 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
TRAPPC2L-207ENST00000564404 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
TRAPPC2L-207ENST00000564404 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
TRAPPC2L-207ENST00000564404 RXRBP28702 533 aa17.49■□□□□ 0.39
TRAPPC2L-207ENST00000564404 ABCA3Q99758 1704 aa17.49■□□□□ 0.39
TRAPPC2L-207ENST00000564404 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 PSME1Q06323 249 aa17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 NBPF1Q3BBV0 1214 aa17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
TRAPPC2L-207ENST00000564404 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 TRPM3Q9HCF6 1732 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
TRAPPC2L-207ENST00000564404 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
TRAPPC2L-207ENST00000564404 SRCAPQ6ZRS2 3230 aa17.46■□□□□ 0.39
TRAPPC2L-207ENST00000564404 USP21Q9UK80 565 aa17.45■□□□□ 0.38
TRAPPC2L-207ENST00000564404 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC2L-207ENST00000564404 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC2L-207ENST00000564404 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
TRAPPC2L-207ENST00000564404 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
TRAPPC2L-207ENST00000564404 ATP7BP35670 1465 aa17.44■□□□□ 0.38
TRAPPC2L-207ENST00000564404 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
TRAPPC2L-207ENST00000564404 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.43■□□□□ 0.38
TRAPPC2L-207ENST00000564404 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC2L-207ENST00000564404 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
TRAPPC2L-207ENST00000564404 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
TRAPPC2L-207ENST00000564404 NGDNQ8NEJ9 315 aaKnown RBP17.42■□□□□ 0.38
TRAPPC2L-207ENST00000564404 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
TRAPPC2L-207ENST00000564404 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
TRAPPC2L-207ENST00000564404 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC2L-207ENST00000564404 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
TRAPPC2L-207ENST00000564404 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
TRAPPC2L-207ENST00000564404 RGS12O14924 1447 aa17.4■□□□□ 0.38
TRAPPC2L-207ENST00000564404 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
TRAPPC2L-207ENST00000564404 TRPC5Q9UL62 973 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC2L-207ENST00000564404 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC2L-207ENST00000564404 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
TRAPPC2L-207ENST00000564404 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC2L-207ENST00000564404 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
TRAPPC2L-207ENST00000564404 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
TRAPPC2L-207ENST00000564404 ATRNO75882 1429 aa17.38■□□□□ 0.37
TRAPPC2L-207ENST00000564404 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
TRAPPC2L-207ENST00000564404 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
TRAPPC2L-207ENST00000564404 SLIT2O94813 1529 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms