RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
AP000842.3-201ENST00000564354 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
AP000842.3-201ENST00000564354 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
AP000842.3-201ENST00000564354 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
AP000842.3-201ENST00000564354 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
AP000842.3-201ENST00000564354 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
AP000842.3-201ENST00000564354 WFS1O76024 890 aa13.04□□□□□ -0.32
AP000842.3-201ENST00000564354 TTC24A2A3L6 582 aaPredicted RBP13.03□□□□□ -0.32
AP000842.3-201ENST00000564354 WNT7AO00755 349 aa13.03□□□□□ -0.32
AP000842.3-201ENST00000564354 NFX1Q12986 1120 aaKnown RBP13.01□□□□□ -0.33
AP000842.3-201ENST00000564354 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
AP000842.3-201ENST00000564354 SMPD1P17405 629 aa13□□□□□ -0.33
AP000842.3-201ENST00000564354 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
AP000842.3-201ENST00000564354 SNIP1Q8TAD8 396 aaKnown RBP13□□□□□ -0.33
AP000842.3-201ENST00000564354 MMP16P51512 607 aa12.99□□□□□ -0.33
AP000842.3-201ENST00000564354 TRIM32Q13049 653 aa12.99□□□□□ -0.33
AP000842.3-201ENST00000564354 Q3C1V9 767 aa12.97□□□□□ -0.33
AP000842.3-201ENST00000564354 WIPF1O43516 503 aa12.96□□□□□ -0.33
AP000842.3-201ENST00000564354 ATP13A2Q9NQ11 1180 aa12.95□□□□□ -0.34
AP000842.3-201ENST00000564354 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
AP000842.3-201ENST00000564354 CD46P15529 392 aa12.93□□□□□ -0.34
AP000842.3-201ENST00000564354 J3QL48 77 aa12.92□□□□□ -0.34
AP000842.3-201ENST00000564354 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
AP000842.3-201ENST00000564354 GPIHBP1Q8IV16 184 aa12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 STK17AQ9UEE5 414 aa12.91□□□□□ -0.34
AP000842.3-201ENST00000564354 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 SNRPBP14678 240 aaKnown RBP12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
AP000842.3-201ENST00000564354 LCE2CQ5TA81 110 aa12.89□□□□□ -0.35
AP000842.3-201ENST00000564354 SENP2Q9HC62 589 aa12.89□□□□□ -0.35
AP000842.3-201ENST00000564354 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
AP000842.3-201ENST00000564354 KDM4AO75164 1064 aa12.87□□□□□ -0.35
AP000842.3-201ENST00000564354 TERTO14746 1132 aaKnown RBP12.86□□□□□ -0.35
AP000842.3-201ENST00000564354 HPS1Q92902 700 aa12.86□□□□□ -0.35
AP000842.3-201ENST00000564354 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
AP000842.3-201ENST00000564354 WNT7BP56706 349 aa12.84□□□□□ -0.35
AP000842.3-201ENST00000564354 SKOR1P84550 965 aa12.84□□□□□ -0.35
AP000842.3-201ENST00000564354 USP46P62068 366 aa12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
AP000842.3-201ENST00000564354 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
AP000842.3-201ENST00000564354 CCDC24Q8N4L8 307 aa12.81□□□□□ -0.36
AP000842.3-201ENST00000564354 HLA-CQ95604 372 aa12.81□□□□□ -0.36
AP000842.3-201ENST00000564354 HOXA2O43364 376 aa12.79□□□□□ -0.36
AP000842.3-201ENST00000564354 IRF6O14896 467 aa12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 JUNDP17535 347 aa12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
AP000842.3-201ENST00000564354 NACADO15069 1562 aa12.73□□□□□ -0.37
AP000842.3-201ENST00000564354 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
AP000842.3-201ENST00000564354 SIAH2O43255 324 aa12.72□□□□□ -0.37
AP000842.3-201ENST00000564354 GUCA2AQ02747 115 aa12.72□□□□□ -0.37
AP000842.3-201ENST00000564354 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
AP000842.3-201ENST00000564354 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
AP000842.3-201ENST00000564354 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
AP000842.3-201ENST00000564354 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
AP000842.3-201ENST00000564354 EHBP1Q8NDI1 1231 aa12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 FAM217BQ9NTX9 383 aaPredicted RBP12.66□□□□□ -0.38
AP000842.3-201ENST00000564354 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
AP000842.3-201ENST00000564354 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
AP000842.3-201ENST00000564354 BMP1P13497 986 aa12.64□□□□□ -0.39
AP000842.3-201ENST00000564354 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
AP000842.3-201ENST00000564354 CLCN1P35523 988 aa12.63□□□□□ -0.39
AP000842.3-201ENST00000564354 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
AP000842.3-201ENST00000564354 LORP23490 312 aaPredicted RBP12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 GMPRP36959 345 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 SH3BP2P78314 561 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
AP000842.3-201ENST00000564354 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
AP000842.3-201ENST00000564354 PCDHGC3Q9UN70 934 aa12.6□□□□□ -0.39
AP000842.3-201ENST00000564354 CCNYL3P0C7X3 344 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 FDX1P10109 184 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 IRF7Q92985 503 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
AP000842.3-201ENST00000564354 MS4A1P11836 297 aa12.58□□□□□ -0.4
AP000842.3-201ENST00000564354 H3BM21 787 aa12.57□□□□□ -0.4
AP000842.3-201ENST00000564354 PTPRNQ16849 979 aa12.56□□□□□ -0.4
AP000842.3-201ENST00000564354 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
AP000842.3-201ENST00000564354 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 EVA1BQ9NVM1 165 aa12.55□□□□□ -0.4
AP000842.3-201ENST00000564354 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
AP000842.3-201ENST00000564354 MPNDQ8N594 471 aa12.53□□□□□ -0.4
AP000842.3-201ENST00000564354 ZFP42Q96MM3 310 aa12.53□□□□□ -0.4
AP000842.3-201ENST00000564354 VEGFBP49765 207 aa12.52□□□□□ -0.41
AP000842.3-201ENST00000564354 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
AP000842.3-201ENST00000564354 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
AP000842.3-201ENST00000564354 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
AP000842.3-201ENST00000564354 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
AP000842.3-201ENST00000564354 BAP1Q92560 729 aa12.5□□□□□ -0.41
AP000842.3-201ENST00000564354 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
AP000842.3-201ENST00000564354 VARSP26640 1264 aaKnown RBP12.49□□□□□ -0.41
AP000842.3-201ENST00000564354 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms