RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 USB1Q9BQ65 265 aaKnown RBP14□□□□□ -0.17
AC027458.1-201ENST00000563639 PLA2G2CQ5R387 149 aa13.99□□□□□ -0.17
AC027458.1-201ENST00000563639 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
AC027458.1-201ENST00000563639 FCF1Q9Y324 198 aaKnown RBP13.96□□□□□ -0.17
AC027458.1-201ENST00000563639 SLC19A1P41440 591 aa13.95□□□□□ -0.18
AC027458.1-201ENST00000563639 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
AC027458.1-201ENST00000563639 LIAT1Q6ZQX7 453 aa13.95□□□□□ -0.18
AC027458.1-201ENST00000563639 MMP16P51512 607 aa13.94□□□□□ -0.18
AC027458.1-201ENST00000563639 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
AC027458.1-201ENST00000563639 IRX2Q9BZI1 471 aaPredicted RBP13.94□□□□□ -0.18
AC027458.1-201ENST00000563639 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
AC027458.1-201ENST00000563639 C6orf229H3BNL8 230 aa13.92□□□□□ -0.18
AC027458.1-201ENST00000563639 DXOO77932 396 aaKnown RBP13.92□□□□□ -0.18
AC027458.1-201ENST00000563639 TPRNQ4KMQ1 711 aa13.92□□□□□ -0.18
AC027458.1-201ENST00000563639 RETREG3Q86VR2 466 aa13.92□□□□□ -0.18
AC027458.1-201ENST00000563639 SPTLC1O15269 473 aa13.91□□□□□ -0.18
AC027458.1-201ENST00000563639 GJA5P36382 358 aa13.91□□□□□ -0.18
AC027458.1-201ENST00000563639 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
AC027458.1-201ENST00000563639 SPRYD7Q5W111 196 aa13.9□□□□□ -0.18
AC027458.1-201ENST00000563639 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
AC027458.1-201ENST00000563639 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
AC027458.1-201ENST00000563639 JUNDP17535 347 aa13.86□□□□□ -0.19
AC027458.1-201ENST00000563639 MTMR2Q13614 643 aa13.86□□□□□ -0.19
AC027458.1-201ENST00000563639 FAM117AQ9C073 453 aa13.86□□□□□ -0.19
AC027458.1-201ENST00000563639 LIMD1Q9UGP4 676 aa13.86□□□□□ -0.19
AC027458.1-201ENST00000563639 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
AC027458.1-201ENST00000563639 RPIAP49247 311 aa13.83□□□□□ -0.2
AC027458.1-201ENST00000563639 TRIM67Q6ZTA4 783 aa13.83□□□□□ -0.2
AC027458.1-201ENST00000563639 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
AC027458.1-201ENST00000563639 PRR7Q8TB68 274 aa13.82□□□□□ -0.2
AC027458.1-201ENST00000563639 GFRA3O60609 400 aa13.81□□□□□ -0.2
AC027458.1-201ENST00000563639 HRCP23327 699 aa13.81□□□□□ -0.2
AC027458.1-201ENST00000563639 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
AC027458.1-201ENST00000563639 ZNF697Q5TEC3 545 aa13.81□□□□□ -0.2
AC027458.1-201ENST00000563639 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
AC027458.1-201ENST00000563639 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 TUSC1Q2TAM9 212 aa13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
AC027458.1-201ENST00000563639 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
AC027458.1-201ENST00000563639 QPCTQ16769 361 aa13.79□□□□□ -0.2
AC027458.1-201ENST00000563639 POLR3EQ9NVU0 708 aa13.79□□□□□ -0.2
AC027458.1-201ENST00000563639 CFAP99D6REC4 459 aa13.78□□□□□ -0.2
AC027458.1-201ENST00000563639 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
AC027458.1-201ENST00000563639 PDZRN3Q9UPQ7 1066 aa13.78□□□□□ -0.2
AC027458.1-201ENST00000563639 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
AC027458.1-201ENST00000563639 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
AC027458.1-201ENST00000563639 ZBTB24O43167 697 aaPredicted RBP13.76□□□□□ -0.21
AC027458.1-201ENST00000563639 LAPTM4AQ15012 233 aa13.76□□□□□ -0.21
AC027458.1-201ENST00000563639 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
AC027458.1-201ENST00000563639 GDF9O60383 454 aa13.75□□□□□ -0.21
AC027458.1-201ENST00000563639 LILRB3O75022 631 aa13.75□□□□□ -0.21
AC027458.1-201ENST00000563639 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
AC027458.1-201ENST00000563639 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
AC027458.1-201ENST00000563639 NRG2O14511 850 aaPredicted RBP13.74□□□□□ -0.21
AC027458.1-201ENST00000563639 TRIM32Q13049 653 aa13.74□□□□□ -0.21
AC027458.1-201ENST00000563639 SH3D19Q5HYK7 790 aa13.74□□□□□ -0.21
AC027458.1-201ENST00000563639 PRR20EP86478 221 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PRR20CP86479 221 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PRR20DP86480 221 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PRR20BP86481 221 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PRR20AP86496 221 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PTPRNQ16849 979 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
AC027458.1-201ENST00000563639 CCNYL3P0C7X3 344 aa13.72□□□□□ -0.21
AC027458.1-201ENST00000563639 SKIV2LQ15477 1246 aaKnown RBP13.72□□□□□ -0.21
AC027458.1-201ENST00000563639 TNFRSF10AO00220 468 aa13.71□□□□□ -0.21
AC027458.1-201ENST00000563639 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
AC027458.1-201ENST00000563639 FOXC1Q12948 553 aa13.69□□□□□ -0.22
AC027458.1-201ENST00000563639 LYPD8Q6UX82 237 aa13.69□□□□□ -0.22
AC027458.1-201ENST00000563639 Q6ZNB5 142 aa13.69□□□□□ -0.22
AC027458.1-201ENST00000563639 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
AC027458.1-201ENST00000563639 EVA1BQ9NVM1 165 aa13.69□□□□□ -0.22
AC027458.1-201ENST00000563639 FBXO31Q5XUX0 539 aaPredicted RBP13.68□□□□□ -0.22
AC027458.1-201ENST00000563639 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
AC027458.1-201ENST00000563639 PER1O15534 1290 aaPredicted RBP13.66□□□□□ -0.22
AC027458.1-201ENST00000563639 SKOR1P84550 965 aa13.65□□□□□ -0.22
AC027458.1-201ENST00000563639 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
AC027458.1-201ENST00000563639 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
AC027458.1-201ENST00000563639 LCE2BO14633 110 aa13.64□□□□□ -0.23
AC027458.1-201ENST00000563639 TSC1Q92574 1164 aa13.64□□□□□ -0.23
AC027458.1-201ENST00000563639 UNC93B1Q9H1C4 597 aa13.63□□□□□ -0.23
AC027458.1-201ENST00000563639 WNT7AO00755 349 aa13.62□□□□□ -0.23
AC027458.1-201ENST00000563639 F12P00748 615 aaPredicted RBP13.61□□□□□ -0.23
AC027458.1-201ENST00000563639 WNT7BP56706 349 aa13.61□□□□□ -0.23
AC027458.1-201ENST00000563639 TOR4AQ9NXH8 423 aa13.6□□□□□ -0.23
AC027458.1-201ENST00000563639 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
AC027458.1-201ENST00000563639 CTHP32929 405 aa13.59□□□□□ -0.23
AC027458.1-201ENST00000563639 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
AC027458.1-201ENST00000563639 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
AC027458.1-201ENST00000563639 GOPCQ9HD26 462 aa13.59□□□□□ -0.23
AC027458.1-201ENST00000563639 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms