RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
NME3-204ENST00000563498 CCDC144AA2RUR9 1427 aa28.02■■■□□ 2.08
NME3-204ENST00000563498 TECPR2O15040 1411 aa28.02■■■□□ 2.08
NME3-204ENST00000563498 USP21Q9UK80 565 aa28.02■■■□□ 2.08
NME3-204ENST00000563498 ADGRF5Q8IZF2 1346 aa28.01■■■□□ 2.07
NME3-204ENST00000563498 TRPC5Q9UL62 973 aaPredicted RBP28.01■■■□□ 2.07
NME3-204ENST00000563498 SPATA31E1Q6ZUB1 1445 aa28.01■■■□□ 2.07
NME3-204ENST00000563498 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
NME3-204ENST00000563498 MYOM2P54296 1465 aa28■■■□□ 2.07
NME3-204ENST00000563498 PXDNQ92626 1479 aa28■■■□□ 2.07
NME3-204ENST00000563498 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
NME3-204ENST00000563498 FOXD1Q16676 465 aa27.99■■■□□ 2.07
NME3-204ENST00000563498 IFT172Q9UG01 1749 aa27.98■■■□□ 2.07
NME3-204ENST00000563498 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
NME3-204ENST00000563498 ATRNO75882 1429 aa27.96■■■□□ 2.07
NME3-204ENST00000563498 ATAD2Q6PL18 1390 aa27.96■■■□□ 2.07
NME3-204ENST00000563498 ABCC11Q96J66 1382 aa27.96■■■□□ 2.07
NME3-204ENST00000563498 KNDC1Q76NI1 1749 aa27.94■■■□□ 2.06
NME3-204ENST00000563498 FOXO3O43524 673 aa27.93■■■□□ 2.06
NME3-204ENST00000563498 RGL3Q3MIN7 710 aa27.93■■■□□ 2.06
NME3-204ENST00000563498 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
NME3-204ENST00000563498 WAPLQ7Z5K2 1190 aa27.92■■■□□ 2.06
NME3-204ENST00000563498 MPHOSPH9Q99550 1183 aa27.92■■■□□ 2.06
NME3-204ENST00000563498 STK26Q9P289 416 aa27.92■■■□□ 2.06
NME3-204ENST00000563498 MARF1Q9Y4F3 1742 aaKnown RBP27.91■■■□□ 2.06
NME3-204ENST00000563498 BCL9LQ86UU0 1499 aa27.9■■■□□ 2.06
NME3-204ENST00000563498 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
NME3-204ENST00000563498 FMN2Q9NZ56 1722 aa27.87■■■□□ 2.05
NME3-204ENST00000563498 XPCQ01831 940 aaPredicted RBP27.87■■■□□ 2.05
NME3-204ENST00000563498 TMEM132EQ6IEE7 984 aa27.87■■■□□ 2.05
NME3-204ENST00000563498 YTHDC2Q9H6S0 1430 aaKnown RBP27.86■■■□□ 2.05
NME3-204ENST00000563498 SIRT1Q96EB6 747 aa27.86■■■□□ 2.05
NME3-204ENST00000563498 KIF1AQ12756 1690 aa27.86■■■□□ 2.05
NME3-204ENST00000563498 NUTM2FA1L443 756 aa27.85■■■□□ 2.05
NME3-204ENST00000563498 ACIN1Q9UKV3 1341 aaKnown RBP27.85■■■□□ 2.05
NME3-204ENST00000563498 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.82■■■□□ 2.04
NME3-204ENST00000563498 SPATA31A3Q5VYP0 1347 aa27.82■■■□□ 2.04
NME3-204ENST00000563498 GJD4Q96KN9 370 aaPredicted RBP27.81■■■□□ 2.04
NME3-204ENST00000563498 C14orf93Q9H972 538 aaKnown RBP27.8■■■□□ 2.04
NME3-204ENST00000563498 NRXN1Q9ULB1 1477 aa27.8■■■□□ 2.04
NME3-204ENST00000563498 CCDC125Q86Z20 511 aa27.79■■■□□ 2.04
NME3-204ENST00000563498 SLIT2O94813 1529 aa27.78■■■□□ 2.04
NME3-204ENST00000563498 KRT28Q7Z3Y7 464 aa27.76■■■□□ 2.03
NME3-204ENST00000563498 UNC5CLQ8IV45 518 aa27.76■■■□□ 2.03
NME3-204ENST00000563498 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
NME3-204ENST00000563498 DHX57Q6P158 1386 aaKnown RBP27.74■■■□□ 2.03
NME3-204ENST00000563498 EP400Q96L91 3159 aa27.74■■■□□ 2.03
NME3-204ENST00000563498 PHF8Q9UPP1 1060 aa27.73■■■□□ 2.03
NME3-204ENST00000563498 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
NME3-204ENST00000563498 RALGAPBQ86X10 1494 aa27.72■■■□□ 2.03
NME3-204ENST00000563498 PSME1Q06323 249 aa27.72■■■□□ 2.03
NME3-204ENST00000563498 GLI3P10071 1580 aa27.71■■■□□ 2.03
NME3-204ENST00000563498 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
NME3-204ENST00000563498 ZRANB1Q9UGI0 708 aa27.7■■■□□ 2.02
NME3-204ENST00000563498 RGPD8O14715 1765 aaPredicted RBP27.7■■■□□ 2.02
NME3-204ENST00000563498 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
NME3-204ENST00000563498 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
NME3-204ENST00000563498 PRAM1Q96QH2 718 aa27.67■■■□□ 2.02
NME3-204ENST00000563498 SRCAPQ6ZRS2 3230 aa27.65■■■□□ 2.02
NME3-204ENST00000563498 ARHGEF10O15013 1369 aa27.65■■■□□ 2.02
NME3-204ENST00000563498 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
NME3-204ENST00000563498 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
NME3-204ENST00000563498 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.02
NME3-204ENST00000563498 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
NME3-204ENST00000563498 VPS72Q15906 364 aa27.63■■■□□ 2.01
NME3-204ENST00000563498 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
NME3-204ENST00000563498 ABCA3Q99758 1704 aa27.62■■■□□ 2.01
NME3-204ENST00000563498 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
NME3-204ENST00000563498 CABLES1Q8TDN4 633 aa27.61■■■□□ 2.01
NME3-204ENST00000563498 POGKQ9P215 609 aa27.61■■■□□ 2.01
NME3-204ENST00000563498 PLCH1Q4KWH8 1693 aa27.61■■■□□ 2.01
NME3-204ENST00000563498 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
NME3-204ENST00000563498 ONECUT3O60422 494 aaPredicted RBP27.59■■■□□ 2.01
NME3-204ENST00000563498 BRWD3Q6RI45 1802 aa27.59■■■□□ 2.01
NME3-204ENST00000563498 SEPT12Q8IYM1 358 aa27.58■■■□□ 2.01
NME3-204ENST00000563498 LMOD2Q6P5Q4 547 aa27.57■■■□□ 2
NME3-204ENST00000563498 RAB3GAP2Q9H2M9 1393 aa27.56■■■□□ 2
NME3-204ENST00000563498 PMFBP1Q8TBY8 1022 aa27.55■■■□□ 2
NME3-204ENST00000563498 EIF3AQ14152 1382 aaKnown RBP27.55■■■□□ 2
NME3-204ENST00000563498 TRPM3Q9HCF6 1732 aaPredicted RBP27.53■■■□□ 2
NME3-204ENST00000563498 FAM83GA6ND36 823 aa27.52■■■□□ 2
NME3-204ENST00000563498 CCDC9Q9Y3X0 531 aaKnown RBP27.52■■■□□ 2
NME3-204ENST00000563498 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
NME3-204ENST00000563498 TULP4Q9NRJ4 1543 aa27.51■■□□□ 1.99
NME3-204ENST00000563498 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
NME3-204ENST00000563498 ALS2Q96Q42 1657 aa27.5■■□□□ 1.99
NME3-204ENST00000563498 SF3B2Q13435 895 aaKnown RBP27.5■■□□□ 1.99
NME3-204ENST00000563498 STAC3Q96MF2 364 aa27.5■■□□□ 1.99
NME3-204ENST00000563498 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
NME3-204ENST00000563498 KRT27Q7Z3Y8 459 aa27.49■■□□□ 1.99
NME3-204ENST00000563498 NRAPQ86VF7 1730 aa27.49■■□□□ 1.99
NME3-204ENST00000563498 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
NME3-204ENST00000563498 PRR36Q9H6K5 1346 aa27.47■■□□□ 1.99
NME3-204ENST00000563498 DEFB132Q7Z7B7 95 aa27.47■■□□□ 1.99
NME3-204ENST00000563498 MINK1Q8N4C8 1332 aaPredicted RBP27.46■■□□□ 1.99
NME3-204ENST00000563498 COL14A1Q05707 1796 aaKnown RBP27.46■■□□□ 1.99
NME3-204ENST00000563498 WASLO00401 505 aaPredicted RBP27.46■■□□□ 1.99
NME3-204ENST00000563498 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
NME3-204ENST00000563498 BTG4Q9NY30 223 aa27.44■■□□□ 1.98
NME3-204ENST00000563498 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms