RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
LPCAT4-204ENST00000563240 ABCC11Q96J66 1382 aa22.36■■□□□ 1.17
LPCAT4-204ENST00000563240 LRP6O75581 1613 aa22.35■■□□□ 1.17
LPCAT4-204ENST00000563240 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
LPCAT4-204ENST00000563240 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
LPCAT4-204ENST00000563240 DCAF11Q8TEB1 546 aa22.34■■□□□ 1.17
LPCAT4-204ENST00000563240 TECPR2O15040 1411 aa22.32■■□□□ 1.16
LPCAT4-204ENST00000563240 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
LPCAT4-204ENST00000563240 MYOM2P54296 1465 aa22.31■■□□□ 1.16
LPCAT4-204ENST00000563240 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
LPCAT4-204ENST00000563240 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
LPCAT4-204ENST00000563240 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
LPCAT4-204ENST00000563240 SHPRHQ149N8 1683 aa22.29■■□□□ 1.16
LPCAT4-204ENST00000563240 XPCQ01831 940 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-204ENST00000563240 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
LPCAT4-204ENST00000563240 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
LPCAT4-204ENST00000563240 PNPLA6Q8IY17 1366 aa22.27■■□□□ 1.16
LPCAT4-204ENST00000563240 FOXO3O43524 673 aa22.27■■□□□ 1.16
LPCAT4-204ENST00000563240 SIRT1Q96EB6 747 aa22.26■■□□□ 1.15
LPCAT4-204ENST00000563240 POGKQ9P215 609 aa22.26■■□□□ 1.15
LPCAT4-204ENST00000563240 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
LPCAT4-204ENST00000563240 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
LPCAT4-204ENST00000563240 ZNF772Q68DY9 489 aaPredicted RBP22.25■■□□□ 1.15
LPCAT4-204ENST00000563240 TRAK1Q9UPV9 953 aa22.25■■□□□ 1.15
LPCAT4-204ENST00000563240 C8orf37Q96NL8 207 aa22.24■■□□□ 1.15
LPCAT4-204ENST00000563240 NPHP3Q7Z494 1330 aa22.23■■□□□ 1.15
LPCAT4-204ENST00000563240 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
LPCAT4-204ENST00000563240 AFF2P51816 1311 aa22.22■■□□□ 1.15
LPCAT4-204ENST00000563240 LAMC1P11047 1609 aa22.2■■□□□ 1.14
LPCAT4-204ENST00000563240 HIRIP3Q9BW71 556 aaPredicted RBP22.19■■□□□ 1.14
LPCAT4-204ENST00000563240 NGLY1Q96IV0 654 aa22.18■■□□□ 1.14
LPCAT4-204ENST00000563240 STAC3Q96MF2 364 aa22.18■■□□□ 1.14
LPCAT4-204ENST00000563240 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
LPCAT4-204ENST00000563240 RXRBP28702 533 aa22.16■■□□□ 1.14
LPCAT4-204ENST00000563240 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
LPCAT4-204ENST00000563240 PHF8Q9UPP1 1060 aa22.15■■□□□ 1.14
LPCAT4-204ENST00000563240 KRT28Q7Z3Y7 464 aa22.14■■□□□ 1.13
LPCAT4-204ENST00000563240 PXDNQ92626 1479 aa22.14■■□□□ 1.13
LPCAT4-204ENST00000563240 FMN2Q9NZ56 1722 aa22.14■■□□□ 1.13
LPCAT4-204ENST00000563240 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
LPCAT4-204ENST00000563240 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
LPCAT4-204ENST00000563240 PMFBP1Q8TBY8 1022 aa22.12■■□□□ 1.13
LPCAT4-204ENST00000563240 QTRT2Q9H974 415 aaKnown RBP22.12■■□□□ 1.13
LPCAT4-204ENST00000563240 PSME1Q06323 249 aa22.09■■□□□ 1.13
LPCAT4-204ENST00000563240 LMOD2Q6P5Q4 547 aa22.09■■□□□ 1.13
LPCAT4-204ENST00000563240 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
LPCAT4-204ENST00000563240 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
LPCAT4-204ENST00000563240 USP21Q9UK80 565 aa22.08■■□□□ 1.13
LPCAT4-204ENST00000563240 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
LPCAT4-204ENST00000563240 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
LPCAT4-204ENST00000563240 WASLO00401 505 aaPredicted RBP22.06■■□□□ 1.12
LPCAT4-204ENST00000563240 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
LPCAT4-204ENST00000563240 RBM6P78332 1123 aaKnown RBP22.05■■□□□ 1.12
LPCAT4-204ENST00000563240 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
LPCAT4-204ENST00000563240 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
LPCAT4-204ENST00000563240 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
LPCAT4-204ENST00000563240 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
LPCAT4-204ENST00000563240 FNBP4Q8N3X1 1017 aaPredicted RBP22.03■■□□□ 1.12
LPCAT4-204ENST00000563240 L3MBTL2Q969R5 705 aa22.03■■□□□ 1.12
LPCAT4-204ENST00000563240 ANKARQ7Z5J8 1434 aa22.03■■□□□ 1.12
LPCAT4-204ENST00000563240 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.12
LPCAT4-204ENST00000563240 ADGRB2O60241 1585 aa22■■□□□ 1.11
LPCAT4-204ENST00000563240 USP32Q8NFA0 1604 aa22■■□□□ 1.11
LPCAT4-204ENST00000563240 TRPC5Q9UL62 973 aaPredicted RBP22■■□□□ 1.11
LPCAT4-204ENST00000563240 TNS3Q68CZ2 1445 aa21.99■■□□□ 1.11
LPCAT4-204ENST00000563240 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
LPCAT4-204ENST00000563240 CDK19Q9BWU1 502 aa21.99■■□□□ 1.11
LPCAT4-204ENST00000563240 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
LPCAT4-204ENST00000563240 NUDT16Q96DE0 195 aaKnown RBP21.97■■□□□ 1.11
LPCAT4-204ENST00000563240 SBNO1A3KN83 1393 aa21.97■■□□□ 1.11
LPCAT4-204ENST00000563240 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
LPCAT4-204ENST00000563240 UPF1Q92900 1129 aaKnown RBP eCLIP21.96■■□□□ 1.11
LPCAT4-204ENST00000563240 RGS12O14924 1447 aa21.96■■□□□ 1.11
LPCAT4-204ENST00000563240 CDK12Q9NYV4 1490 aaPredicted RBP21.96■■□□□ 1.11
LPCAT4-204ENST00000563240 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
LPCAT4-204ENST00000563240 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
LPCAT4-204ENST00000563240 PAK3O75914 559 aaPredicted RBP21.95■■□□□ 1.1
LPCAT4-204ENST00000563240 BCL9LQ86UU0 1499 aa21.94■■□□□ 1.1
LPCAT4-204ENST00000563240 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
LPCAT4-204ENST00000563240 ATRNO75882 1429 aa21.92■■□□□ 1.1
LPCAT4-204ENST00000563240 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
LPCAT4-204ENST00000563240 KIAA1210Q9ULL0 1709 aa21.91■■□□□ 1.1
LPCAT4-204ENST00000563240 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
LPCAT4-204ENST00000563240 GJD4Q96KN9 370 aaPredicted RBP21.9■■□□□ 1.1
LPCAT4-204ENST00000563240 SRPK2P78362 688 aaKnown RBP21.89■■□□□ 1.09
LPCAT4-204ENST00000563240 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
LPCAT4-204ENST00000563240 ATP7BP35670 1465 aa21.89■■□□□ 1.09
LPCAT4-204ENST00000563240 CABP2Q9NPB3 220 aa21.88■■□□□ 1.09
LPCAT4-204ENST00000563240 CCDC61Q9Y6R9 512 aa21.88■■□□□ 1.09
LPCAT4-204ENST00000563240 MARF1Q9Y4F3 1742 aaKnown RBP21.87■■□□□ 1.09
LPCAT4-204ENST00000563240 FAM83GA6ND36 823 aa21.87■■□□□ 1.09
LPCAT4-204ENST00000563240 SLIT2O94813 1529 aa21.86■■□□□ 1.09
LPCAT4-204ENST00000563240 ACEP12821 1306 aa21.86■■□□□ 1.09
LPCAT4-204ENST00000563240 NUTM2GQ5VZR2 741 aa21.86■■□□□ 1.09
LPCAT4-204ENST00000563240 CCDC9Q9Y3X0 531 aaKnown RBP21.86■■□□□ 1.09
LPCAT4-204ENST00000563240 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
LPCAT4-204ENST00000563240 ROCK2O75116 1388 aaKnown RBP21.84■■□□□ 1.09
LPCAT4-204ENST00000563240 TRPM3Q9HCF6 1732 aaPredicted RBP21.83■■□□□ 1.09
LPCAT4-204ENST00000563240 PLEKHG3A1L390 1219 aa21.82■■□□□ 1.08
LPCAT4-204ENST00000563240 BTG4Q9NY30 223 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms