RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FCF1Q9Y324 198 aaKnown RBP7.44□□□□□ -1.22
SHCBP1-202ENST00000563219 CD2BP2O95400 341 aaKnown RBP7.43□□□□□ -1.22
SHCBP1-202ENST00000563219 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
SHCBP1-202ENST00000563219 PRDM9Q9NQV7 894 aa7.43□□□□□ -1.22
SHCBP1-202ENST00000563219 HOXA2O43364 376 aa7.42□□□□□ -1.22
SHCBP1-202ENST00000563219 HLA-CQ95604 372 aa7.42□□□□□ -1.22
SHCBP1-202ENST00000563219 SSTR3P32745 418 aaPredicted RBP7.41□□□□□ -1.22
SHCBP1-202ENST00000563219 MMP16P51512 607 aa7.41□□□□□ -1.22
SHCBP1-202ENST00000563219 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
SHCBP1-202ENST00000563219 TNFRSF10AO00220 468 aa7.4□□□□□ -1.22
SHCBP1-202ENST00000563219 DGAT1O75907 488 aa7.4□□□□□ -1.22
SHCBP1-202ENST00000563219 AMHR2Q16671 573 aa7.4□□□□□ -1.22
SHCBP1-202ENST00000563219 NUTM1Q86Y26 1132 aa7.4□□□□□ -1.22
SHCBP1-202ENST00000563219 PKD2L1Q9P0L9 805 aa7.4□□□□□ -1.22
SHCBP1-202ENST00000563219 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
SHCBP1-202ENST00000563219 ZBTB24O43167 697 aaPredicted RBP7.38□□□□□ -1.23
SHCBP1-202ENST00000563219 TTLL12Q14166 644 aaPredicted RBP7.38□□□□□ -1.23
SHCBP1-202ENST00000563219 DXOO77932 396 aaKnown RBP7.37□□□□□ -1.23
SHCBP1-202ENST00000563219 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
SHCBP1-202ENST00000563219 FOXC1Q12948 553 aa7.37□□□□□ -1.23
SHCBP1-202ENST00000563219 MYT1Q01538 1121 aa7.36□□□□□ -1.23
SHCBP1-202ENST00000563219 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
SHCBP1-202ENST00000563219 SYMPKQ92797 1274 aaKnown RBP7.36□□□□□ -1.23
SHCBP1-202ENST00000563219 FAM187AA6NFU0 413 aa7.35□□□□□ -1.23
SHCBP1-202ENST00000563219 TRIM66O15016 1216 aa7.35□□□□□ -1.23
SHCBP1-202ENST00000563219 FDX1P10109 184 aa7.35□□□□□ -1.23
SHCBP1-202ENST00000563219 GIGYF2Q6Y7W6 1299 aaKnown RBP7.35□□□□□ -1.23
SHCBP1-202ENST00000563219 RETREG3Q86VR2 466 aa7.34□□□□□ -1.23
SHCBP1-202ENST00000563219 AK7Q96M32 723 aa7.34□□□□□ -1.23
SHCBP1-202ENST00000563219 TOR4AQ9NXH8 423 aa7.34□□□□□ -1.23
SHCBP1-202ENST00000563219 PCDHGC3Q9UN70 934 aa7.34□□□□□ -1.23
SHCBP1-202ENST00000563219 TRIM32Q13049 653 aa7.33□□□□□ -1.24
SHCBP1-202ENST00000563219 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
SHCBP1-202ENST00000563219 JUNDP17535 347 aa7.32□□□□□ -1.24
SHCBP1-202ENST00000563219 NDUFV2P19404 249 aa7.32□□□□□ -1.24
SHCBP1-202ENST00000563219 CYP4X1Q8N118 509 aa7.32□□□□□ -1.24
SHCBP1-202ENST00000563219 CCDC24Q8N4L8 307 aa7.32□□□□□ -1.24
SHCBP1-202ENST00000563219 BEGAINQ9BUH8 593 aa7.32□□□□□ -1.24
SHCBP1-202ENST00000563219 MOXD2PA6NHM9 499 aa7.31□□□□□ -1.24
SHCBP1-202ENST00000563219 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
SHCBP1-202ENST00000563219 WNT7AO00755 349 aa7.31□□□□□ -1.24
SHCBP1-202ENST00000563219 PARP9Q8IXQ6 854 aa7.31□□□□□ -1.24
SHCBP1-202ENST00000563219 AVPP01185 164 aa7.29□□□□□ -1.24
SHCBP1-202ENST00000563219 GJA5P36382 358 aa7.29□□□□□ -1.24
SHCBP1-202ENST00000563219 DIXDC1Q155Q3 683 aa7.29□□□□□ -1.24
SHCBP1-202ENST00000563219 TBC1D2Q9BYX2 928 aa7.29□□□□□ -1.24
SHCBP1-202ENST00000563219 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
SHCBP1-202ENST00000563219 TTC24A2A3L6 582 aaPredicted RBP7.28□□□□□ -1.24
SHCBP1-202ENST00000563219 MS4A1P11836 297 aa7.28□□□□□ -1.24
SHCBP1-202ENST00000563219 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
SHCBP1-202ENST00000563219 MRGPRX2Q96LB1 330 aa7.28□□□□□ -1.24
SHCBP1-202ENST00000563219 NUDT12Q9BQG2 462 aa7.28□□□□□ -1.24
SHCBP1-202ENST00000563219 SPDYE5A6NIY4 337 aa7.27□□□□□ -1.25
SHCBP1-202ENST00000563219 WNT7BP56706 349 aa7.27□□□□□ -1.25
SHCBP1-202ENST00000563219 MTMR2Q13614 643 aa7.27□□□□□ -1.25
SHCBP1-202ENST00000563219 PTCRAQ6ISU1 281 aaPredicted RBP7.27□□□□□ -1.25
SHCBP1-202ENST00000563219 CRIPAKQ8N1N5 446 aa7.27□□□□□ -1.25
SHCBP1-202ENST00000563219 POTECB2RU33 542 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 ST8SIA5O15466 376 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 SKOR1P84550 965 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 PDE4DQ08499 809 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 RC3H1Q5TC82 1133 aaKnown RBP7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 RSBN1LQ6PCB5 846 aaPredicted RBP7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 SLC24A3Q9HC58 644 aa7.26□□□□□ -1.25
SHCBP1-202ENST00000563219 SPTLC1O15269 473 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 SMPD1P17405 629 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 PTPRNQ16849 979 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 CTC1Q2NKJ3 1217 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 DESI1Q6ICB0 168 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 EVA1BQ9NVM1 165 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 PCDHB15Q9Y5E8 787 aa7.25□□□□□ -1.25
SHCBP1-202ENST00000563219 CCNYL3P0C7X3 344 aa7.24□□□□□ -1.25
SHCBP1-202ENST00000563219 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
SHCBP1-202ENST00000563219 J3QL48 77 aa7.23□□□□□ -1.25
SHCBP1-202ENST00000563219 AXIN1O15169 862 aa7.23□□□□□ -1.25
SHCBP1-202ENST00000563219 RIC3Q7Z5B4 369 aa7.23□□□□□ -1.25
SHCBP1-202ENST00000563219 ZNF775Q96BV0 537 aaPredicted RBP7.23□□□□□ -1.25
SHCBP1-202ENST00000563219 KCNH2Q12809 1159 aa7.22□□□□□ -1.25
SHCBP1-202ENST00000563219 PRPF38BQ5VTL8 546 aaKnown RBP7.22□□□□□ -1.25
SHCBP1-202ENST00000563219 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
SHCBP1-202ENST00000563219 HRCP23327 699 aa7.21□□□□□ -1.26
SHCBP1-202ENST00000563219 SH3BP2P78314 561 aa7.21□□□□□ -1.26
SHCBP1-202ENST00000563219 UNC93B1Q9H1C4 597 aa7.21□□□□□ -1.26
SHCBP1-202ENST00000563219 ZBTB3Q9H5J0 574 aa7.21□□□□□ -1.26
SHCBP1-202ENST00000563219 CFAP99D6REC4 459 aa7.2□□□□□ -1.26
SHCBP1-202ENST00000563219 SIAH2O43255 324 aa7.2□□□□□ -1.26
SHCBP1-202ENST00000563219 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
SHCBP1-202ENST00000563219 TUSC1Q2TAM9 212 aa7.19□□□□□ -1.26
SHCBP1-202ENST00000563219 MYSM1Q5VVJ2 828 aa7.19□□□□□ -1.26
SHCBP1-202ENST00000563219 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
SHCBP1-202ENST00000563219 BAP1Q92560 729 aa7.19□□□□□ -1.26
SHCBP1-202ENST00000563219 HPS1Q92902 700 aa7.19□□□□□ -1.26
SHCBP1-202ENST00000563219 ALDH1A1P00352 501 aa7.18□□□□□ -1.26
SHCBP1-202ENST00000563219 CABLES1Q8TDN4 633 aa7.18□□□□□ -1.26
SHCBP1-202ENST00000563219 LIMD1Q9UGP4 676 aa7.18□□□□□ -1.26
SHCBP1-202ENST00000563219 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
SHCBP1-202ENST00000563219 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
SHCBP1-202ENST00000563219 GMPR2Q9P2T1 348 aaKnown RBP7.17□□□□□ -1.26
SHCBP1-202ENST00000563219 LILRB3O75022 631 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms