RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SOS2Q07890 1332 aaPredicted RBP20.05■□□□□ 0.8
SPG7-207ENST00000563218 PXDNQ92626 1479 aa20.04■□□□□ 0.8
SPG7-207ENST00000563218 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
SPG7-207ENST00000563218 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
SPG7-207ENST00000563218 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
SPG7-207ENST00000563218 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
SPG7-207ENST00000563218 EP400Q96L91 3159 aa20.01■□□□□ 0.79
SPG7-207ENST00000563218 MYOM2P54296 1465 aa20■□□□□ 0.79
SPG7-207ENST00000563218 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
SPG7-207ENST00000563218 PLEKHH1Q9ULM0 1364 aa19.99■□□□□ 0.79
SPG7-207ENST00000563218 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
SPG7-207ENST00000563218 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
SPG7-207ENST00000563218 KIF1AQ12756 1690 aa19.98■□□□□ 0.79
SPG7-207ENST00000563218 TECPR2O15040 1411 aa19.98■□□□□ 0.79
SPG7-207ENST00000563218 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.98■□□□□ 0.79
SPG7-207ENST00000563218 ABCA3Q99758 1704 aa19.97■□□□□ 0.79
SPG7-207ENST00000563218 XPCQ01831 940 aaPredicted RBP19.97■□□□□ 0.79
SPG7-207ENST00000563218 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
SPG7-207ENST00000563218 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
SPG7-207ENST00000563218 BRWD3Q6RI45 1802 aa19.97■□□□□ 0.79
SPG7-207ENST00000563218 PIK3C2GO75747 1445 aa19.96■□□□□ 0.79
SPG7-207ENST00000563218 ATRNO75882 1429 aa19.96■□□□□ 0.79
SPG7-207ENST00000563218 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
SPG7-207ENST00000563218 STK26Q9P289 416 aa19.96■□□□□ 0.79
SPG7-207ENST00000563218 ESCO1Q5FWF5 840 aa19.95■□□□□ 0.78
SPG7-207ENST00000563218 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
SPG7-207ENST00000563218 USP21Q9UK80 565 aa19.94■□□□□ 0.78
SPG7-207ENST00000563218 LRPPRCP42704 1394 aaKnown RBP19.94■□□□□ 0.78
SPG7-207ENST00000563218 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
SPG7-207ENST00000563218 USP32Q8NFA0 1604 aa19.92■□□□□ 0.78
SPG7-207ENST00000563218 PLCH1Q4KWH8 1693 aa19.92■□□□□ 0.78
SPG7-207ENST00000563218 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
SPG7-207ENST00000563218 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
SPG7-207ENST00000563218 FNBP4Q8N3X1 1017 aaPredicted RBP19.91■□□□□ 0.78
SPG7-207ENST00000563218 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
SPG7-207ENST00000563218 YTHDC2Q9H6S0 1430 aaKnown RBP19.91■□□□□ 0.78
SPG7-207ENST00000563218 GLI3P10071 1580 aa19.91■□□□□ 0.78
SPG7-207ENST00000563218 FOXO3O43524 673 aa19.9■□□□□ 0.78
SPG7-207ENST00000563218 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
SPG7-207ENST00000563218 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
SPG7-207ENST00000563218 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
SPG7-207ENST00000563218 NRXN1Q9ULB1 1477 aa19.87■□□□□ 0.77
SPG7-207ENST00000563218 ATAD2Q6PL18 1390 aa19.87■□□□□ 0.77
SPG7-207ENST00000563218 SRCAPQ6ZRS2 3230 aa19.85■□□□□ 0.77
SPG7-207ENST00000563218 SLIT2O94813 1529 aa19.84■□□□□ 0.77
SPG7-207ENST00000563218 TRPM3Q9HCF6 1732 aaPredicted RBP19.84■□□□□ 0.77
SPG7-207ENST00000563218 NWD2Q9ULI1 1742 aa19.84■□□□□ 0.77
SPG7-207ENST00000563218 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
SPG7-207ENST00000563218 SPATA31A3Q5VYP0 1347 aa19.82■□□□□ 0.76
SPG7-207ENST00000563218 NRAPQ86VF7 1730 aa19.82■□□□□ 0.76
SPG7-207ENST00000563218 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
SPG7-207ENST00000563218 ADGRB2O60241 1585 aa19.8■□□□□ 0.76
SPG7-207ENST00000563218 TNS3Q68CZ2 1445 aa19.8■□□□□ 0.76
SPG7-207ENST00000563218 CFAP70Q5T0N1 1121 aa19.8■□□□□ 0.76
SPG7-207ENST00000563218 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
SPG7-207ENST00000563218 ALS2Q96Q42 1657 aa19.79■□□□□ 0.76
SPG7-207ENST00000563218 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
SPG7-207ENST00000563218 ADGRB1O14514 1584 aa19.78■□□□□ 0.76
SPG7-207ENST00000563218 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
SPG7-207ENST00000563218 DLC1Q96QB1 1528 aa19.77■□□□□ 0.76
SPG7-207ENST00000563218 PLEKHG5O94827 1062 aa19.77■□□□□ 0.76
SPG7-207ENST00000563218 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
SPG7-207ENST00000563218 GJD4Q96KN9 370 aaPredicted RBP19.77■□□□□ 0.76
SPG7-207ENST00000563218 CABLES1Q8TDN4 633 aa19.76■□□□□ 0.75
SPG7-207ENST00000563218 ARHGEF28Q8N1W1 1705 aaKnown RBP19.76■□□□□ 0.75
SPG7-207ENST00000563218 PHF8Q9UPP1 1060 aa19.75■□□□□ 0.75
SPG7-207ENST00000563218 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
SPG7-207ENST00000563218 UNC5CLQ8IV45 518 aa19.74■□□□□ 0.75
SPG7-207ENST00000563218 PRAM1Q96QH2 718 aa19.74■□□□□ 0.75
SPG7-207ENST00000563218 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
SPG7-207ENST00000563218 SIRT1Q96EB6 747 aa19.73■□□□□ 0.75
SPG7-207ENST00000563218 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
SPG7-207ENST00000563218 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
SPG7-207ENST00000563218 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
SPG7-207ENST00000563218 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
SPG7-207ENST00000563218 COL14A1Q05707 1796 aaKnown RBP19.69■□□□□ 0.74
SPG7-207ENST00000563218 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
SPG7-207ENST00000563218 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
SPG7-207ENST00000563218 PHRF1Q9P1Y6 1649 aaKnown RBP19.67■□□□□ 0.74
SPG7-207ENST00000563218 HAP1P54257 671 aaPredicted RBP19.67■□□□□ 0.74
SPG7-207ENST00000563218 LMOD2Q6P5Q4 547 aa19.67■□□□□ 0.74
SPG7-207ENST00000563218 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
SPG7-207ENST00000563218 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
SPG7-207ENST00000563218 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
SPG7-207ENST00000563218 PSME1Q06323 249 aa19.65■□□□□ 0.74
SPG7-207ENST00000563218 POGKQ9P215 609 aa19.65■□□□□ 0.74
SPG7-207ENST00000563218 TRAK1Q9UPV9 953 aa19.65■□□□□ 0.74
SPG7-207ENST00000563218 ARHGEF10O15013 1369 aa19.65■□□□□ 0.74
SPG7-207ENST00000563218 TOPAZ1Q8N9V7 1692 aa19.65■□□□□ 0.74
SPG7-207ENST00000563218 VPS72Q15906 364 aa19.64■□□□□ 0.73
SPG7-207ENST00000563218 SEPT12Q8IYM1 358 aa19.64■□□□□ 0.73
SPG7-207ENST00000563218 MINK1Q8N4C8 1332 aaPredicted RBP19.64■□□□□ 0.73
SPG7-207ENST00000563218 DEFB132Q7Z7B7 95 aa19.63■□□□□ 0.73
SPG7-207ENST00000563218 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
SPG7-207ENST00000563218 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
SPG7-207ENST00000563218 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
SPG7-207ENST00000563218 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
SPG7-207ENST00000563218 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
SPG7-207ENST00000563218 CCDC9Q9Y3X0 531 aaKnown RBP19.62■□□□□ 0.73
SPG7-207ENST00000563218 THSD7AQ9UPZ6 1657 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms