RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 ROBO2Q9HCK4 1378 aa16.84■□□□□ 0.29
FANCA-209ENST00000562424 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
FANCA-209ENST00000562424 ASXL1Q8IXJ9 1541 aa16.84■□□□□ 0.29
FANCA-209ENST00000562424 LAMC1P11047 1609 aa16.84■□□□□ 0.29
FANCA-209ENST00000562424 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
FANCA-209ENST00000562424 TECPR2O15040 1411 aa16.8■□□□□ 0.28
FANCA-209ENST00000562424 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
FANCA-209ENST00000562424 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
FANCA-209ENST00000562424 CAPN15O75808 1086 aa16.8■□□□□ 0.28
FANCA-209ENST00000562424 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
FANCA-209ENST00000562424 MST1RQ04912 1400 aa16.79■□□□□ 0.28
FANCA-209ENST00000562424 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
FANCA-209ENST00000562424 TMEM132EQ6IEE7 984 aa16.78■□□□□ 0.28
FANCA-209ENST00000562424 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
FANCA-209ENST00000562424 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
FANCA-209ENST00000562424 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
FANCA-209ENST00000562424 CFAP70Q5T0N1 1121 aa16.77■□□□□ 0.28
FANCA-209ENST00000562424 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
FANCA-209ENST00000562424 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.27
FANCA-209ENST00000562424 DHX57Q6P158 1386 aaKnown RBP16.77■□□□□ 0.27
FANCA-209ENST00000562424 JCADQ9P266 1359 aa16.77■□□□□ 0.27
FANCA-209ENST00000562424 STK26Q9P289 416 aa16.76■□□□□ 0.27
FANCA-209ENST00000562424 COL16A1Q07092 1604 aaPredicted RBP16.75■□□□□ 0.27
FANCA-209ENST00000562424 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
FANCA-209ENST00000562424 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
FANCA-209ENST00000562424 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
FANCA-209ENST00000562424 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
FANCA-209ENST00000562424 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
FANCA-209ENST00000562424 NHSL1Q5SYE7 1610 aa16.73■□□□□ 0.27
FANCA-209ENST00000562424 WAPLQ7Z5K2 1190 aa16.72■□□□□ 0.27
FANCA-209ENST00000562424 SIRT1Q96EB6 747 aa16.72■□□□□ 0.27
FANCA-209ENST00000562424 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
FANCA-209ENST00000562424 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
FANCA-209ENST00000562424 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
FANCA-209ENST00000562424 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
FANCA-209ENST00000562424 KIAA1210Q9ULL0 1709 aa16.69■□□□□ 0.26
FANCA-209ENST00000562424 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
FANCA-209ENST00000562424 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
FANCA-209ENST00000562424 ZNF772Q68DY9 489 aaPredicted RBP16.66■□□□□ 0.26
FANCA-209ENST00000562424 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
FANCA-209ENST00000562424 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
FANCA-209ENST00000562424 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
FANCA-209ENST00000562424 LRP6O75581 1613 aa16.64■□□□□ 0.25
FANCA-209ENST00000562424 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
FANCA-209ENST00000562424 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
FANCA-209ENST00000562424 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
FANCA-209ENST00000562424 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
FANCA-209ENST00000562424 RGPD8O14715 1765 aaPredicted RBP16.63■□□□□ 0.25
FANCA-209ENST00000562424 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
FANCA-209ENST00000562424 UPF1Q92900 1129 aaKnown RBP eCLIP16.62■□□□□ 0.25
FANCA-209ENST00000562424 POGKQ9P215 609 aa16.62■□□□□ 0.25
FANCA-209ENST00000562424 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
FANCA-209ENST00000562424 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
FANCA-209ENST00000562424 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
FANCA-209ENST00000562424 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
FANCA-209ENST00000562424 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
FANCA-209ENST00000562424 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
FANCA-209ENST00000562424 KIF1AQ12756 1690 aa16.59■□□□□ 0.25
FANCA-209ENST00000562424 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
FANCA-209ENST00000562424 RXRBP28702 533 aa16.59■□□□□ 0.25
FANCA-209ENST00000562424 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
FANCA-209ENST00000562424 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
FANCA-209ENST00000562424 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
FANCA-209ENST00000562424 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
FANCA-209ENST00000562424 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
FANCA-209ENST00000562424 PNPLA6Q8IY17 1366 aa16.56■□□□□ 0.24
FANCA-209ENST00000562424 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
FANCA-209ENST00000562424 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
FANCA-209ENST00000562424 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
FANCA-209ENST00000562424 PXDNQ92626 1479 aa16.55■□□□□ 0.24
FANCA-209ENST00000562424 ANKARQ7Z5J8 1434 aa16.55■□□□□ 0.24
FANCA-209ENST00000562424 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
FANCA-209ENST00000562424 FOXO3O43524 673 aa16.55■□□□□ 0.24
FANCA-209ENST00000562424 POLA2Q14181 598 aa16.55■□□□□ 0.24
FANCA-209ENST00000562424 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
FANCA-209ENST00000562424 TULP4Q9NRJ4 1543 aa16.53■□□□□ 0.24
FANCA-209ENST00000562424 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
FANCA-209ENST00000562424 COL22A1Q8NFW1 1626 aaPredicted RBP16.52■□□□□ 0.24
FANCA-209ENST00000562424 AFF2P51816 1311 aa16.52■□□□□ 0.24
FANCA-209ENST00000562424 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
FANCA-209ENST00000562424 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.24
FANCA-209ENST00000562424 CDK12Q9NYV4 1490 aaPredicted RBP16.52■□□□□ 0.23
FANCA-209ENST00000562424 XPCQ01831 940 aaPredicted RBP16.5■□□□□ 0.23
FANCA-209ENST00000562424 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
FANCA-209ENST00000562424 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
FANCA-209ENST00000562424 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
FANCA-209ENST00000562424 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
FANCA-209ENST00000562424 PRR36Q9H6K5 1346 aa16.48■□□□□ 0.23
FANCA-209ENST00000562424 ABCB7O75027 752 aa16.48■□□□□ 0.23
FANCA-209ENST00000562424 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
FANCA-209ENST00000562424 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
FANCA-209ENST00000562424 KRT28Q7Z3Y7 464 aa16.47■□□□□ 0.23
FANCA-209ENST00000562424 ROCK2O75116 1388 aaKnown RBP16.47■□□□□ 0.23
FANCA-209ENST00000562424 ATP7BP35670 1465 aa16.47■□□□□ 0.23
FANCA-209ENST00000562424 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
FANCA-209ENST00000562424 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
FANCA-209ENST00000562424 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
FANCA-209ENST00000562424 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
FANCA-209ENST00000562424 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
FANCA-209ENST00000562424 GPRASP1Q5JY77 1395 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms