RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 ILDR1Q86SU0 546 aaPredicted RBP17.32■□□□□ 0.36
AC009065.7-201ENST00000561544 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
AC009065.7-201ENST00000561544 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
AC009065.7-201ENST00000561544 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
AC009065.7-201ENST00000561544 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
AC009065.7-201ENST00000561544 MST1RQ04912 1400 aa17.3■□□□□ 0.36
AC009065.7-201ENST00000561544 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
AC009065.7-201ENST00000561544 TOM1O60784 492 aa17.3■□□□□ 0.36
AC009065.7-201ENST00000561544 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
AC009065.7-201ENST00000561544 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
AC009065.7-201ENST00000561544 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
AC009065.7-201ENST00000561544 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
AC009065.7-201ENST00000561544 ATF3P18847 181 aa17.27■□□□□ 0.36
AC009065.7-201ENST00000561544 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
AC009065.7-201ENST00000561544 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
AC009065.7-201ENST00000561544 POGKQ9P215 609 aa17.26■□□□□ 0.35
AC009065.7-201ENST00000561544 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
AC009065.7-201ENST00000561544 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
AC009065.7-201ENST00000561544 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
AC009065.7-201ENST00000561544 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
AC009065.7-201ENST00000561544 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
AC009065.7-201ENST00000561544 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
AC009065.7-201ENST00000561544 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
AC009065.7-201ENST00000561544 TULP4Q9NRJ4 1543 aa17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
AC009065.7-201ENST00000561544 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
AC009065.7-201ENST00000561544 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
AC009065.7-201ENST00000561544 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
AC009065.7-201ENST00000561544 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
AC009065.7-201ENST00000561544 HSPA1LP34931 641 aa17.18■□□□□ 0.34
AC009065.7-201ENST00000561544 BRINP3Q76B58 766 aa17.18■□□□□ 0.34
AC009065.7-201ENST00000561544 ATP7BP35670 1465 aa17.18■□□□□ 0.34
AC009065.7-201ENST00000561544 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
AC009065.7-201ENST00000561544 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
AC009065.7-201ENST00000561544 PRR36Q9H6K5 1346 aa17.14■□□□□ 0.33
AC009065.7-201ENST00000561544 USP47Q96K76 1375 aa17.14■□□□□ 0.33
AC009065.7-201ENST00000561544 WASLO00401 505 aaPredicted RBP17.13■□□□□ 0.33
AC009065.7-201ENST00000561544 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
AC009065.7-201ENST00000561544 SHPRHQ149N8 1683 aa17.11■□□□□ 0.33
AC009065.7-201ENST00000561544 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
AC009065.7-201ENST00000561544 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
AC009065.7-201ENST00000561544 PXDNQ92626 1479 aa17.11■□□□□ 0.33
AC009065.7-201ENST00000561544 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
AC009065.7-201ENST00000561544 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
AC009065.7-201ENST00000561544 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
AC009065.7-201ENST00000561544 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
AC009065.7-201ENST00000561544 NUDT16Q96DE0 195 aaKnown RBP17.06■□□□□ 0.32
AC009065.7-201ENST00000561544 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
AC009065.7-201ENST00000561544 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
AC009065.7-201ENST00000561544 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
AC009065.7-201ENST00000561544 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
AC009065.7-201ENST00000561544 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
AC009065.7-201ENST00000561544 PHF8Q9UPP1 1060 aa17.05■□□□□ 0.32
AC009065.7-201ENST00000561544 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 FOXO3O43524 673 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 TESK2Q96S53 571 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 MYOM1P52179 1685 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
AC009065.7-201ENST00000561544 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
AC009065.7-201ENST00000561544 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
AC009065.7-201ENST00000561544 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
AC009065.7-201ENST00000561544 SOS2Q07890 1332 aaPredicted RBP17.02■□□□□ 0.32
AC009065.7-201ENST00000561544 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
AC009065.7-201ENST00000561544 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
AC009065.7-201ENST00000561544 JCADQ9P266 1359 aa17.01■□□□□ 0.31
AC009065.7-201ENST00000561544 PNPLA6Q8IY17 1366 aa17■□□□□ 0.31
AC009065.7-201ENST00000561544 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
AC009065.7-201ENST00000561544 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
AC009065.7-201ENST00000561544 LRP6O75581 1613 aa16.99■□□□□ 0.31
AC009065.7-201ENST00000561544 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
AC009065.7-201ENST00000561544 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
AC009065.7-201ENST00000561544 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
AC009065.7-201ENST00000561544 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
AC009065.7-201ENST00000561544 KRT28Q7Z3Y7 464 aa16.97■□□□□ 0.31
AC009065.7-201ENST00000561544 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
AC009065.7-201ENST00000561544 ACEP12821 1306 aa16.96■□□□□ 0.31
AC009065.7-201ENST00000561544 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
AC009065.7-201ENST00000561544 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC009065.7-201ENST00000561544 CD163L1Q9NR16 1453 aa16.96■□□□□ 0.31
AC009065.7-201ENST00000561544 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
AC009065.7-201ENST00000561544 SBNO1A3KN83 1393 aa16.94■□□□□ 0.3
AC009065.7-201ENST00000561544 PSME1Q06323 249 aa16.94■□□□□ 0.3
AC009065.7-201ENST00000561544 USP6P35125 1406 aa16.94■□□□□ 0.3
AC009065.7-201ENST00000561544 TMF1P82094 1093 aa16.93■□□□□ 0.3
AC009065.7-201ENST00000561544 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
AC009065.7-201ENST00000561544 SPATA31A6Q5VVP1 1343 aa16.9■□□□□ 0.3
AC009065.7-201ENST00000561544 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
AC009065.7-201ENST00000561544 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
AC009065.7-201ENST00000561544 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms