RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
AC009065.7-201ENST00000561544 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
AC009065.7-201ENST00000561544 ABCC9O60706 1549 aa25.27■■□□□ 1.64
AC009065.7-201ENST00000561544 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
AC009065.7-201ENST00000561544 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
AC009065.7-201ENST00000561544 NACADO15069 1562 aa24.35■■□□□ 1.49
AC009065.7-201ENST00000561544 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
AC009065.7-201ENST00000561544 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
AC009065.7-201ENST00000561544 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
AC009065.7-201ENST00000561544 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
AC009065.7-201ENST00000561544 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
AC009065.7-201ENST00000561544 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
AC009065.7-201ENST00000561544 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
AC009065.7-201ENST00000561544 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
AC009065.7-201ENST00000561544 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
AC009065.7-201ENST00000561544 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
AC009065.7-201ENST00000561544 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
AC009065.7-201ENST00000561544 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
AC009065.7-201ENST00000561544 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
AC009065.7-201ENST00000561544 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
AC009065.7-201ENST00000561544 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
AC009065.7-201ENST00000561544 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
AC009065.7-201ENST00000561544 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
AC009065.7-201ENST00000561544 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
AC009065.7-201ENST00000561544 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
AC009065.7-201ENST00000561544 WIZO95785 1651 aa22.42■■□□□ 1.18
AC009065.7-201ENST00000561544 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
AC009065.7-201ENST00000561544 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
AC009065.7-201ENST00000561544 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
AC009065.7-201ENST00000561544 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
AC009065.7-201ENST00000561544 NESP48681 1621 aa21.95■■□□□ 1.1
AC009065.7-201ENST00000561544 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
AC009065.7-201ENST00000561544 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
AC009065.7-201ENST00000561544 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
AC009065.7-201ENST00000561544 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
AC009065.7-201ENST00000561544 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
AC009065.7-201ENST00000561544 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
AC009065.7-201ENST00000561544 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
AC009065.7-201ENST00000561544 CFTRP13569 1480 aa21.71■■□□□ 1.07
AC009065.7-201ENST00000561544 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
AC009065.7-201ENST00000561544 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
AC009065.7-201ENST00000561544 FANCD2Q9BXW9 1451 aa21.58■■□□□ 1.04
AC009065.7-201ENST00000561544 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
AC009065.7-201ENST00000561544 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
AC009065.7-201ENST00000561544 CUX2O14529 1486 aa21.44■■□□□ 1.02
AC009065.7-201ENST00000561544 WDR62O43379 1518 aa21.44■■□□□ 1.02
AC009065.7-201ENST00000561544 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
AC009065.7-201ENST00000561544 DNMBPQ6XZF7 1577 aa21.29■■□□□ 1
AC009065.7-201ENST00000561544 TOPBP1Q92547 1522 aa21.27■■□□□ 1
AC009065.7-201ENST00000561544 CUX1P39880 1505 aa21.2■□□□□ 0.98
AC009065.7-201ENST00000561544 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
AC009065.7-201ENST00000561544 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
AC009065.7-201ENST00000561544 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
AC009065.7-201ENST00000561544 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
AC009065.7-201ENST00000561544 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
AC009065.7-201ENST00000561544 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
AC009065.7-201ENST00000561544 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
AC009065.7-201ENST00000561544 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
AC009065.7-201ENST00000561544 IFT140Q96RY7 1462 aa21.05■□□□□ 0.96
AC009065.7-201ENST00000561544 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
AC009065.7-201ENST00000561544 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
AC009065.7-201ENST00000561544 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
AC009065.7-201ENST00000561544 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
AC009065.7-201ENST00000561544 SOGA1O94964 1423 aa20.95■□□□□ 0.94
AC009065.7-201ENST00000561544 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
AC009065.7-201ENST00000561544 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.93
AC009065.7-201ENST00000561544 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
AC009065.7-201ENST00000561544 ABCA5Q8WWZ7 1642 aa20.85■□□□□ 0.93
AC009065.7-201ENST00000561544 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
AC009065.7-201ENST00000561544 CHD1O14646 1710 aa20.75■□□□□ 0.91
AC009065.7-201ENST00000561544 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
AC009065.7-201ENST00000561544 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
AC009065.7-201ENST00000561544 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
AC009065.7-201ENST00000561544 MAGI1Q96QZ7 1491 aaPredicted RBP20.65■□□□□ 0.9
AC009065.7-201ENST00000561544 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
AC009065.7-201ENST00000561544 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
AC009065.7-201ENST00000561544 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
AC009065.7-201ENST00000561544 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
AC009065.7-201ENST00000561544 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
AC009065.7-201ENST00000561544 CUL7Q14999 1698 aa20.52■□□□□ 0.88
AC009065.7-201ENST00000561544 FBLN2P98095 1184 aa20.52■□□□□ 0.88
AC009065.7-201ENST00000561544 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.87
AC009065.7-201ENST00000561544 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
AC009065.7-201ENST00000561544 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
AC009065.7-201ENST00000561544 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
AC009065.7-201ENST00000561544 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
AC009065.7-201ENST00000561544 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
AC009065.7-201ENST00000561544 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
AC009065.7-201ENST00000561544 IGF1RP08069 1367 aa20.45■□□□□ 0.86
AC009065.7-201ENST00000561544 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
AC009065.7-201ENST00000561544 CEP170Q5SW79 1584 aa20.43■□□□□ 0.86
AC009065.7-201ENST00000561544 NUP160Q12769 1436 aa20.36■□□□□ 0.85
AC009065.7-201ENST00000561544 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
AC009065.7-201ENST00000561544 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.84
AC009065.7-201ENST00000561544 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.84
AC009065.7-201ENST00000561544 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.84
AC009065.7-201ENST00000561544 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
AC009065.7-201ENST00000561544 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
AC009065.7-201ENST00000561544 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
AC009065.7-201ENST00000561544 EEA1Q15075 1411 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms