RNA–Protein interactions for RNA: ENST00000561458.5

AC055874.1-201, humanhuman

TSL 2 BASIC

Gene AC055874.1, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-201ENST00000561458 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
AC055874.1-201ENST00000561458 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
AC055874.1-201ENST00000561458 FAM160A2Q8N612 972 aaPredicted RBP8.71□□□□□ -1.02
AC055874.1-201ENST00000561458 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
AC055874.1-201ENST00000561458 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.02
AC055874.1-201ENST00000561458 TTC24A2A3L6 582 aaPredicted RBP8.7□□□□□ -1.02
AC055874.1-201ENST00000561458 C11orf95C9JLR9 678 aaPredicted RBP8.7□□□□□ -1.02
AC055874.1-201ENST00000561458 GCGRP47871 477 aa8.7□□□□□ -1.02
AC055874.1-201ENST00000561458 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
AC055874.1-201ENST00000561458 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
AC055874.1-201ENST00000561458 FECHP22830 423 aa8.69□□□□□ -1.02
AC055874.1-201ENST00000561458 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
AC055874.1-201ENST00000561458 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
AC055874.1-201ENST00000561458 WFS1O76024 890 aa8.68□□□□□ -1.02
AC055874.1-201ENST00000561458 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
AC055874.1-201ENST00000561458 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
AC055874.1-201ENST00000561458 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
AC055874.1-201ENST00000561458 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
AC055874.1-201ENST00000561458 GPR37O15354 613 aa8.65□□□□□ -1.02
AC055874.1-201ENST00000561458 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
AC055874.1-201ENST00000561458 WNT7AO00755 349 aa8.64□□□□□ -1.03
AC055874.1-201ENST00000561458 Q3C1V9 767 aa8.64□□□□□ -1.03
AC055874.1-201ENST00000561458 SNIP1Q8TAD8 396 aaKnown RBP8.64□□□□□ -1.03
AC055874.1-201ENST00000561458 TRIM32Q13049 653 aa8.63□□□□□ -1.03
AC055874.1-201ENST00000561458 TPRNQ4KMQ1 711 aa8.63□□□□□ -1.03
AC055874.1-201ENST00000561458 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
AC055874.1-201ENST00000561458 PHOX2BQ99453 314 aa8.62□□□□□ -1.03
AC055874.1-201ENST00000561458 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 SMPD1P17405 629 aa8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 NFX1Q12986 1120 aaKnown RBP8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
AC055874.1-201ENST00000561458 MMP16P51512 607 aa8.6□□□□□ -1.03
AC055874.1-201ENST00000561458 INSM1Q01101 510 aaPredicted RBP8.6□□□□□ -1.03
AC055874.1-201ENST00000561458 MRGPRX2Q96LB1 330 aa8.6□□□□□ -1.03
AC055874.1-201ENST00000561458 REPIN1Q9BWE0 567 aaKnown RBP8.6□□□□□ -1.03
AC055874.1-201ENST00000561458 SENP2Q9HC62 589 aa8.6□□□□□ -1.03
AC055874.1-201ENST00000561458 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
AC055874.1-201ENST00000561458 WIPF1O43516 503 aa8.59□□□□□ -1.03
AC055874.1-201ENST00000561458 GPIHBP1Q8IV16 184 aa8.58□□□□□ -1.04
AC055874.1-201ENST00000561458 J3QL48 77 aa8.57□□□□□ -1.04
AC055874.1-201ENST00000561458 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
AC055874.1-201ENST00000561458 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
AC055874.1-201ENST00000561458 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
AC055874.1-201ENST00000561458 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
AC055874.1-201ENST00000561458 KDM4AO75164 1064 aa8.55□□□□□ -1.04
AC055874.1-201ENST00000561458 CD46P15529 392 aa8.55□□□□□ -1.04
AC055874.1-201ENST00000561458 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
AC055874.1-201ENST00000561458 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
AC055874.1-201ENST00000561458 TERTO14746 1132 aaKnown RBP8.54□□□□□ -1.04
AC055874.1-201ENST00000561458 CCDC24Q8N4L8 307 aa8.54□□□□□ -1.04
AC055874.1-201ENST00000561458 HPS1Q92902 700 aa8.54□□□□□ -1.04
AC055874.1-201ENST00000561458 WNT7BP56706 349 aa8.53□□□□□ -1.04
AC055874.1-201ENST00000561458 USP46P62068 366 aa8.53□□□□□ -1.04
AC055874.1-201ENST00000561458 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.04
AC055874.1-201ENST00000561458 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
AC055874.1-201ENST00000561458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC055874.1-201ENST00000561458 MAP2K5Q13163 448 aa8.5□□□□□ -1.05
AC055874.1-201ENST00000561458 SKOR1P84550 965 aa8.49□□□□□ -1.05
AC055874.1-201ENST00000561458 HOXA2O43364 376 aa8.48□□□□□ -1.05
AC055874.1-201ENST00000561458 ALDH1A1P00352 501 aa8.48□□□□□ -1.05
AC055874.1-201ENST00000561458 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
AC055874.1-201ENST00000561458 HLA-CQ95604 372 aa8.48□□□□□ -1.05
AC055874.1-201ENST00000561458 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
AC055874.1-201ENST00000561458 JUNDP17535 347 aa8.47□□□□□ -1.05
AC055874.1-201ENST00000561458 MDM2Q00987 491 aaPredicted RBP8.47□□□□□ -1.05
AC055874.1-201ENST00000561458 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
AC055874.1-201ENST00000561458 LOC105371045A0A1W2PR82 267 aa8.45□□□□□ -1.06
AC055874.1-201ENST00000561458 FAM181BA6NEQ2 426 aa8.44□□□□□ -1.06
AC055874.1-201ENST00000561458 IRF6O14896 467 aa8.44□□□□□ -1.06
AC055874.1-201ENST00000561458 EHBP1Q8NDI1 1231 aa8.44□□□□□ -1.06
AC055874.1-201ENST00000561458 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
AC055874.1-201ENST00000561458 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
AC055874.1-201ENST00000561458 NXF1Q9UBU9 619 aaKnown RBP8.43□□□□□ -1.06
AC055874.1-201ENST00000561458 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
AC055874.1-201ENST00000561458 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
AC055874.1-201ENST00000561458 BAZ1AQ9NRL2 1556 aaPredicted RBP8.42□□□□□ -1.06
AC055874.1-201ENST00000561458 MINK1Q8N4C8 1332 aaPredicted RBP8.41□□□□□ -1.06
AC055874.1-201ENST00000561458 CAPN5O15484 640 aaPredicted RBP8.41□□□□□ -1.06
AC055874.1-201ENST00000561458 BMP1P13497 986 aa8.41□□□□□ -1.06
AC055874.1-201ENST00000561458 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
AC055874.1-201ENST00000561458 SIAH2O43255 324 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 CLCN1P35523 988 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 NPAS3Q8IXF0 933 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 IRF7Q92985 503 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 GPCPD1Q9NPB8 672 aa8.4□□□□□ -1.06
AC055874.1-201ENST00000561458 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
AC055874.1-201ENST00000561458 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
AC055874.1-201ENST00000561458 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
AC055874.1-201ENST00000561458 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
AC055874.1-201ENST00000561458 NACADO15069 1562 aa8.39□□□□□ -1.07
AC055874.1-201ENST00000561458 CCNYL3P0C7X3 344 aa8.38□□□□□ -1.07
AC055874.1-201ENST00000561458 GMPRP36959 345 aa8.38□□□□□ -1.07
AC055874.1-201ENST00000561458 CCDC102AQ96A19 550 aa8.38□□□□□ -1.07
AC055874.1-201ENST00000561458 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
AC055874.1-201ENST00000561458 MS4A1P11836 297 aa8.37□□□□□ -1.07
AC055874.1-201ENST00000561458 KRI1Q8N9T8 703 aaKnown RBP8.37□□□□□ -1.07
AC055874.1-201ENST00000561458 ZSCAN1Q8NBB4 408 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms