RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
HERC1-214ENST00000561400 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
HERC1-214ENST00000561400 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
HERC1-214ENST00000561400 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
HERC1-214ENST00000561400 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■□□ 15
HERC1-214ENST00000561400 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
HERC1-214ENST00000561400 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
HERC1-214ENST00000561400 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
HERC1-214ENST00000561400 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
HERC1-214ENST00000561400 POGKQ9P215 609 aa16.33■□□□□ 0.2
HERC1-214ENST00000561400 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
HERC1-214ENST00000561400 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
HERC1-214ENST00000561400 LTBP4Q8N2S1 1624 aa16.32■□□□□ 0.2
HERC1-214ENST00000561400 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
HERC1-214ENST00000561400 LRRC7Q96NW7 1537 aa16.3■□□□□ 0.2
HERC1-214ENST00000561400 TESK2Q96S53 571 aa16.3■□□□□ 0.2
HERC1-214ENST00000561400 ANO8Q9HCE9 1232 aaPredicted RBP16.3■□□□□ 0.2
HERC1-214ENST00000561400 NALCNQ8IZF0 1738 aa16.29■□□□□ 0.2
HERC1-214ENST00000561400 TMEM94Q12767 1356 aa16.29■□□□□ 0.2
HERC1-214ENST00000561400 MINK1Q8N4C8 1332 aaPredicted RBP16.28■□□□□ 0.2
HERC1-214ENST00000561400 SBNO2Q9Y2G9 1366 aa16.27■□□□□ 0.2
HERC1-214ENST00000561400 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
HERC1-214ENST00000561400 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
HERC1-214ENST00000561400 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
HERC1-214ENST00000561400 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
HERC1-214ENST00000561400 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
HERC1-214ENST00000561400 C14orf37Q86TY3 774 aa16.23■□□□□ 0.19
HERC1-214ENST00000561400 C11orf95C9JLR9 678 aaPredicted RBP16.22■□□□□ 0.19
HERC1-214ENST00000561400 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
HERC1-214ENST00000561400 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
HERC1-214ENST00000561400 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.19
HERC1-214ENST00000561400 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.18
HERC1-214ENST00000561400 CDK19Q9BWU1 502 aa16.2■□□□□ 0.18
HERC1-214ENST00000561400 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
HERC1-214ENST00000561400 TMF1P82094 1093 aa16.19■□□□□ 0.18
HERC1-214ENST00000561400 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
HERC1-214ENST00000561400 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
HERC1-214ENST00000561400 MSH6P52701 1360 aa16.19■□□□□ 0.18
HERC1-214ENST00000561400 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
HERC1-214ENST00000561400 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
HERC1-214ENST00000561400 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
HERC1-214ENST00000561400 DCCP43146 1447 aa16.17■□□□□ 0.18
HERC1-214ENST00000561400 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
HERC1-214ENST00000561400 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
HERC1-214ENST00000561400 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
HERC1-214ENST00000561400 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
HERC1-214ENST00000561400 ATF3P18847 181 aa16.15■□□□□ 0.18
HERC1-214ENST00000561400 ATP7BP35670 1465 aa16.14■□□□□ 0.17
HERC1-214ENST00000561400 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
HERC1-214ENST00000561400 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
HERC1-214ENST00000561400 CERKQ8TCT0 537 aa16.14■□□□□ 0.17
HERC1-214ENST00000561400 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
HERC1-214ENST00000561400 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
HERC1-214ENST00000561400 MST1RQ04912 1400 aa16.13■□□□□ 0.17
HERC1-214ENST00000561400 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
HERC1-214ENST00000561400 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
HERC1-214ENST00000561400 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
HERC1-214ENST00000561400 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
HERC1-214ENST00000561400 MYOM1P52179 1685 aa16.12■□□□□ 0.17
HERC1-214ENST00000561400 TOPAZ1Q8N9V7 1692 aa16.12■□□□□ 0.17
HERC1-214ENST00000561400 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
HERC1-214ENST00000561400 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
HERC1-214ENST00000561400 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
HERC1-214ENST00000561400 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
HERC1-214ENST00000561400 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
HERC1-214ENST00000561400 SLAIN2Q9P270 581 aa16.1■□□□□ 0.17
HERC1-214ENST00000561400 CCDC61Q9Y6R9 512 aa16.1■□□□□ 0.17
HERC1-214ENST00000561400 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
HERC1-214ENST00000561400 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
HERC1-214ENST00000561400 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
HERC1-214ENST00000561400 CABP1Q9NZU7 370 aa16.08■□□□□ 0.16
HERC1-214ENST00000561400 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
HERC1-214ENST00000561400 TMC1Q8TDI8 760 aa16.07■□□□□ 0.16
HERC1-214ENST00000561400 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
HERC1-214ENST00000561400 PMFBP1Q8TBY8 1022 aa16.06■□□□□ 0.16
HERC1-214ENST00000561400 PLEKHG3A1L390 1219 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 TOM1O60784 492 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
HERC1-214ENST00000561400 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
HERC1-214ENST00000561400 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
HERC1-214ENST00000561400 KIF1AQ12756 1690 aa16.03■□□□□ 0.16
HERC1-214ENST00000561400 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
HERC1-214ENST00000561400 ACEP12821 1306 aa16.02■□□□□ 0.16
HERC1-214ENST00000561400 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
HERC1-214ENST00000561400 FOXO3O43524 673 aa16.01■□□□□ 0.15
HERC1-214ENST00000561400 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
HERC1-214ENST00000561400 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
HERC1-214ENST00000561400 NGDNQ8NEJ9 315 aaKnown RBP16■□□□□ 0.15
HERC1-214ENST00000561400 DDX17Q92841 729 aaKnown RBP16■□□□□ 0.15
HERC1-214ENST00000561400 A0A1W2PP64 1363 aa16■□□□□ 0.15
HERC1-214ENST00000561400 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
HERC1-214ENST00000561400 PIP4K2BP78356 416 aa16■□□□□ 0.15
HERC1-214ENST00000561400 PANK3Q9H999 370 aa16■□□□□ 0.15
HERC1-214ENST00000561400 MON2Q7Z3U7 1717 aa16■□□□□ 0.15
HERC1-214ENST00000561400 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
HERC1-214ENST00000561400 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
HERC1-214ENST00000561400 NHSL1Q5SYE7 1610 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms