RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 NALCNQ8IZF0 1738 aa10.75□□□□□ -0.69
TPM1-231ENST00000561395 L3MBTL2Q969R5 705 aa10.75□□□□□ -0.69
TPM1-231ENST00000561395 CCDC144AA2RUR9 1427 aa10.75□□□□□ -0.69
TPM1-231ENST00000561395 DCCP43146 1447 aa10.75□□□□□ -0.69
TPM1-231ENST00000561395 C19orf44Q9H6X5 657 aa10.74□□□□□ -0.69
TPM1-231ENST00000561395 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
TPM1-231ENST00000561395 ADAMTS13Q76LX8 1427 aa10.74□□□□□ -0.69
TPM1-231ENST00000561395 LAMC1P11047 1609 aa10.73□□□□□ -0.69
TPM1-231ENST00000561395 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
TPM1-231ENST00000561395 CLTCL1P53675 1640 aa10.73□□□□□ -0.69
TPM1-231ENST00000561395 NGLY1Q96IV0 654 aa10.72□□□□□ -0.69
TPM1-231ENST00000561395 PIK3R4Q99570 1358 aa10.72□□□□□ -0.69
TPM1-231ENST00000561395 MST1RQ04912 1400 aa10.72□□□□□ -0.69
TPM1-231ENST00000561395 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.69
TPM1-231ENST00000561395 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
TPM1-231ENST00000561395 NRXN3Q9Y4C0 1643 aa10.71□□□□□ -0.69
TPM1-231ENST00000561395 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
TPM1-231ENST00000561395 COL22A1Q8NFW1 1626 aaPredicted RBP10.7□□□□□ -0.7
TPM1-231ENST00000561395 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
TPM1-231ENST00000561395 PTPRUQ92729 1446 aa10.69□□□□□ -0.7
TPM1-231ENST00000561395 LRRC59Q96AG4 307 aaKnown RBP10.69□□□□□ -0.7
TPM1-231ENST00000561395 ATRNO75882 1429 aa10.68□□□□□ -0.7
TPM1-231ENST00000561395 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
TPM1-231ENST00000561395 KIF1BO60333 1816 aa10.68□□□□□ -0.7
TPM1-231ENST00000561395 SPATA31E1Q6ZUB1 1445 aa10.67□□□□□ -0.7
TPM1-231ENST00000561395 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
TPM1-231ENST00000561395 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
TPM1-231ENST00000561395 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
TPM1-231ENST00000561395 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
TPM1-231ENST00000561395 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
TPM1-231ENST00000561395 DDX17Q92841 729 aaKnown RBP10.66□□□□□ -0.7
TPM1-231ENST00000561395 USP21Q9UK80 565 aa10.66□□□□□ -0.7
TPM1-231ENST00000561395 TRPC5Q9UL62 973 aaPredicted RBP10.66□□□□□ -0.7
TPM1-231ENST00000561395 PTCH1Q13635 1447 aa10.66□□□□□ -0.7
TPM1-231ENST00000561395 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
TPM1-231ENST00000561395 CCDC125Q86Z20 511 aa10.65□□□□□ -0.7
TPM1-231ENST00000561395 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.65□□□□□ -0.7
TPM1-231ENST00000561395 PRAG1Q86YV5 1406 aa10.65□□□□□ -0.7
TPM1-231ENST00000561395 ADGRL3Q9HAR2 1447 aa10.65□□□□□ -0.7
TPM1-231ENST00000561395 AMOTL2Q9Y2J4 779 aa10.64□□□□□ -0.71
TPM1-231ENST00000561395 BLMP54132 1417 aaPredicted RBP10.63□□□□□ -0.71
TPM1-231ENST00000561395 GLI3P10071 1580 aa10.63□□□□□ -0.71
TPM1-231ENST00000561395 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
TPM1-231ENST00000561395 DCAF11Q8TEB1 546 aa10.62□□□□□ -0.71
TPM1-231ENST00000561395 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
TPM1-231ENST00000561395 MYOM2P54296 1465 aa10.61□□□□□ -0.71
TPM1-231ENST00000561395 C1orf167Q5SNV9 1468 aa10.61□□□□□ -0.71
TPM1-231ENST00000561395 BCL9LQ86UU0 1499 aa10.61□□□□□ -0.71
TPM1-231ENST00000561395 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
TPM1-231ENST00000561395 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
TPM1-231ENST00000561395 ZNF326Q5BKZ1 582 aaKnown RBP10.6□□□□□ -0.71
TPM1-231ENST00000561395 PPLO60437 1756 aa10.6□□□□□ -0.71
TPM1-231ENST00000561395 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
TPM1-231ENST00000561395 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
TPM1-231ENST00000561395 KDM2AQ9Y2K7 1162 aa10.59□□□□□ -0.71
TPM1-231ENST00000561395 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
TPM1-231ENST00000561395 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
TPM1-231ENST00000561395 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
TPM1-231ENST00000561395 DEFB132Q7Z7B7 95 aa10.58□□□□□ -0.72
TPM1-231ENST00000561395 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.72
TPM1-231ENST00000561395 USP47Q96K76 1375 aa10.57□□□□□ -0.72
TPM1-231ENST00000561395 STAC3Q96MF2 364 aa10.57□□□□□ -0.72
TPM1-231ENST00000561395 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
TPM1-231ENST00000561395 NWD2Q9ULI1 1742 aa10.57□□□□□ -0.72
TPM1-231ENST00000561395 NRXN1Q9ULB1 1477 aa10.56□□□□□ -0.72
TPM1-231ENST00000561395 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
TPM1-231ENST00000561395 METP08581 1390 aa10.56□□□□□ -0.72
TPM1-231ENST00000561395 USP32Q8NFA0 1604 aa10.56□□□□□ -0.72
TPM1-231ENST00000561395 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
TPM1-231ENST00000561395 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
TPM1-231ENST00000561395 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
TPM1-231ENST00000561395 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
TPM1-231ENST00000561395 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
TPM1-231ENST00000561395 PXDNQ92626 1479 aa10.55□□□□□ -0.72
TPM1-231ENST00000561395 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
TPM1-231ENST00000561395 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
TPM1-231ENST00000561395 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
TPM1-231ENST00000561395 ORAI2Q96SN7 254 aa10.53□□□□□ -0.72
TPM1-231ENST00000561395 SLIT2O94813 1529 aa10.53□□□□□ -0.72
TPM1-231ENST00000561395 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.72
TPM1-231ENST00000561395 WASHC2AQ641Q2 1341 aa10.52□□□□□ -0.73
TPM1-231ENST00000561395 RPGRIP1LQ68CZ1 1315 aa10.51□□□□□ -0.73
TPM1-231ENST00000561395 CCDC7Q96M83 1385 aa10.51□□□□□ -0.73
TPM1-231ENST00000561395 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
TPM1-231ENST00000561395 PIK3C2GO75747 1445 aa10.5□□□□□ -0.73
TPM1-231ENST00000561395 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
TPM1-231ENST00000561395 RGPD8O14715 1765 aaPredicted RBP10.5□□□□□ -0.73
TPM1-231ENST00000561395 NBPF1Q3BBV0 1214 aa10.5□□□□□ -0.73
TPM1-231ENST00000561395 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
TPM1-231ENST00000561395 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
TPM1-231ENST00000561395 UNC5CLQ8IV45 518 aa10.49□□□□□ -0.73
TPM1-231ENST00000561395 MIER1Q8N108 512 aa10.49□□□□□ -0.73
TPM1-231ENST00000561395 NPHP3Q7Z494 1330 aa10.49□□□□□ -0.73
TPM1-231ENST00000561395 ADGRF5Q8IZF2 1346 aa10.49□□□□□ -0.73
TPM1-231ENST00000561395 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
TPM1-231ENST00000561395 YY1P25490 414 aa10.48□□□□□ -0.73
TPM1-231ENST00000561395 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
TPM1-231ENST00000561395 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
TPM1-231ENST00000561395 RREB1Q92766 1687 aa10.47□□□□□ -0.73
TPM1-231ENST00000561395 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms