RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
SEMA4B-220ENST00000561321 DCAF11Q8TEB1 546 aa18.02■□□□□ 0.48
SEMA4B-220ENST00000561321 ORAI2Q96SN7 254 aa18.02■□□□□ 0.48
SEMA4B-220ENST00000561321 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
SEMA4B-220ENST00000561321 CDC42BPGQ6DT37 1551 aa18.01■□□□□ 0.47
SEMA4B-220ENST00000561321 MEX3CQ5U5Q3 659 aaKnown RBP18.01■□□□□ 0.47
SEMA4B-220ENST00000561321 DHX57Q6P158 1386 aaKnown RBP18.01■□□□□ 0.47
SEMA4B-220ENST00000561321 LRP6O75581 1613 aa18.01■□□□□ 0.47
SEMA4B-220ENST00000561321 NUTM2FA1L443 756 aa17.99■□□□□ 0.47
SEMA4B-220ENST00000561321 NUTM2BA6NNL0 878 aaPredicted RBP17.99■□□□□ 0.47
SEMA4B-220ENST00000561321 NUTM2EB1AL46 878 aaPredicted RBP17.99■□□□□ 0.47
SEMA4B-220ENST00000561321 NUTM2AQ8IVF1 878 aaPredicted RBP17.99■□□□□ 0.47
SEMA4B-220ENST00000561321 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
SEMA4B-220ENST00000561321 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
SEMA4B-220ENST00000561321 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.47
SEMA4B-220ENST00000561321 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
SEMA4B-220ENST00000561321 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
SEMA4B-220ENST00000561321 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
SEMA4B-220ENST00000561321 POGKQ9P215 609 aa17.94■□□□□ 0.46
SEMA4B-220ENST00000561321 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
SEMA4B-220ENST00000561321 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
SEMA4B-220ENST00000561321 PNPLA6Q8IY17 1366 aa17.93■□□□□ 0.46
SEMA4B-220ENST00000561321 FMN2Q9NZ56 1722 aa17.93■□□□□ 0.46
SEMA4B-220ENST00000561321 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
SEMA4B-220ENST00000561321 XPCQ01831 940 aaPredicted RBP17.91■□□□□ 0.46
SEMA4B-220ENST00000561321 STAC3Q96MF2 364 aa17.91■□□□□ 0.46
SEMA4B-220ENST00000561321 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
SEMA4B-220ENST00000561321 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
SEMA4B-220ENST00000561321 FOXO3O43524 673 aa17.9■□□□□ 0.46
SEMA4B-220ENST00000561321 RGPD8O14715 1765 aaPredicted RBP17.89■□□□□ 0.45
SEMA4B-220ENST00000561321 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
SEMA4B-220ENST00000561321 ADAMTS2O95450 1211 aa17.87■□□□□ 0.45
SEMA4B-220ENST00000561321 ZNF772Q68DY9 489 aaPredicted RBP17.87■□□□□ 0.45
SEMA4B-220ENST00000561321 C8orf37Q96NL8 207 aa17.87■□□□□ 0.45
SEMA4B-220ENST00000561321 PXDNQ92626 1479 aa17.87■□□□□ 0.45
SEMA4B-220ENST00000561321 AFF2P51816 1311 aa17.86■□□□□ 0.45
SEMA4B-220ENST00000561321 MINK1Q8N4C8 1332 aaPredicted RBP17.86■□□□□ 0.45
SEMA4B-220ENST00000561321 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
SEMA4B-220ENST00000561321 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
SEMA4B-220ENST00000561321 ADGRB2O60241 1585 aa17.83■□□□□ 0.45
SEMA4B-220ENST00000561321 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
SEMA4B-220ENST00000561321 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.44
SEMA4B-220ENST00000561321 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
SEMA4B-220ENST00000561321 COL22A1Q8NFW1 1626 aaPredicted RBP17.82■□□□□ 0.44
SEMA4B-220ENST00000561321 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
SEMA4B-220ENST00000561321 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
SEMA4B-220ENST00000561321 KRT28Q7Z3Y7 464 aa17.81■□□□□ 0.44
SEMA4B-220ENST00000561321 NGLY1Q96IV0 654 aa17.81■□□□□ 0.44
SEMA4B-220ENST00000561321 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
SEMA4B-220ENST00000561321 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
SEMA4B-220ENST00000561321 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
SEMA4B-220ENST00000561321 RXRBP28702 533 aa17.79■□□□□ 0.44
SEMA4B-220ENST00000561321 L3MBTL2Q969R5 705 aa17.79■□□□□ 0.44
SEMA4B-220ENST00000561321 WASLO00401 505 aaPredicted RBP17.78■□□□□ 0.44
SEMA4B-220ENST00000561321 SPATA31A3Q5VYP0 1347 aa17.77■□□□□ 0.44
SEMA4B-220ENST00000561321 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
SEMA4B-220ENST00000561321 PSME1Q06323 249 aa17.77■□□□□ 0.44
SEMA4B-220ENST00000561321 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.43
SEMA4B-220ENST00000561321 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.43
SEMA4B-220ENST00000561321 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
SEMA4B-220ENST00000561321 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
SEMA4B-220ENST00000561321 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
SEMA4B-220ENST00000561321 TNS3Q68CZ2 1445 aa17.75■□□□□ 0.43
SEMA4B-220ENST00000561321 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
SEMA4B-220ENST00000561321 USP21Q9UK80 565 aa17.74■□□□□ 0.43
SEMA4B-220ENST00000561321 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
SEMA4B-220ENST00000561321 HAP1P54257 671 aaPredicted RBP17.73■□□□□ 0.43
SEMA4B-220ENST00000561321 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
SEMA4B-220ENST00000561321 CDK19Q9BWU1 502 aa17.72■□□□□ 0.43
SEMA4B-220ENST00000561321 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
SEMA4B-220ENST00000561321 CABLES1Q8TDN4 633 aa17.71■□□□□ 0.43
SEMA4B-220ENST00000561321 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
SEMA4B-220ENST00000561321 ATP7BP35670 1465 aa17.7■□□□□ 0.42
SEMA4B-220ENST00000561321 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
SEMA4B-220ENST00000561321 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
SEMA4B-220ENST00000561321 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-220ENST00000561321 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
SEMA4B-220ENST00000561321 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
SEMA4B-220ENST00000561321 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
SEMA4B-220ENST00000561321 TRPC5Q9UL62 973 aaPredicted RBP17.69■□□□□ 0.42
SEMA4B-220ENST00000561321 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
SEMA4B-220ENST00000561321 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
SEMA4B-220ENST00000561321 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-220ENST00000561321 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
SEMA4B-220ENST00000561321 RGS12O14924 1447 aa17.67■□□□□ 0.42
SEMA4B-220ENST00000561321 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
SEMA4B-220ENST00000561321 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
SEMA4B-220ENST00000561321 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
SEMA4B-220ENST00000561321 BCL9LQ86UU0 1499 aa17.66■□□□□ 0.42
SEMA4B-220ENST00000561321 ATRNO75882 1429 aa17.65■□□□□ 0.42
SEMA4B-220ENST00000561321 SRPK2P78362 688 aaKnown RBP17.65■□□□□ 0.42
SEMA4B-220ENST00000561321 TOPAZ1Q8N9V7 1692 aa17.64■□□□□ 0.42
SEMA4B-220ENST00000561321 ALS2Q96Q42 1657 aa17.64■□□□□ 0.42
SEMA4B-220ENST00000561321 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
SEMA4B-220ENST00000561321 NBPF8Q3BBV2 869 aa17.63■□□□□ 0.41
SEMA4B-220ENST00000561321 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
SEMA4B-220ENST00000561321 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
SEMA4B-220ENST00000561321 SLIT2O94813 1529 aa17.62■□□□□ 0.41
SEMA4B-220ENST00000561321 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
SEMA4B-220ENST00000561321 ACEP12821 1306 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms