RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.5
RABGGTA-220ENST00000560998 GLIPR1L2Q4G1C9 344 aa18.2■□□□□ 0.5
RABGGTA-220ENST00000560998 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 IDI1Q13907 227 aa18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-220ENST00000560998 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
RABGGTA-220ENST00000560998 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
RABGGTA-220ENST00000560998 MYO5BQ9ULV0 1848 aa18.18■□□□□ 0.5
RABGGTA-220ENST00000560998 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
RABGGTA-220ENST00000560998 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
RABGGTA-220ENST00000560998 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
RABGGTA-220ENST00000560998 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
RABGGTA-220ENST00000560998 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
RABGGTA-220ENST00000560998 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
RABGGTA-220ENST00000560998 REREQ9P2R6 1566 aa18.16■□□□□ 0.5
RABGGTA-220ENST00000560998 CDCA7LQ96GN5 454 aa18.15■□□□□ 0.5
RABGGTA-220ENST00000560998 NUTM2DQ5VT03 806 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-220ENST00000560998 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
RABGGTA-220ENST00000560998 DAXXQ9UER7 740 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-220ENST00000560998 AGLP35573 1532 aa18.12■□□□□ 0.49
RABGGTA-220ENST00000560998 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
RABGGTA-220ENST00000560998 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
RABGGTA-220ENST00000560998 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
RABGGTA-220ENST00000560998 PUS7Q96PZ0 661 aaKnown RBP18.1■□□□□ 0.49
RABGGTA-220ENST00000560998 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
RABGGTA-220ENST00000560998 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
RABGGTA-220ENST00000560998 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
RABGGTA-220ENST00000560998 EVC2Q86UK5 1308 aa18.07■□□□□ 0.48
RABGGTA-220ENST00000560998 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
RABGGTA-220ENST00000560998 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
RABGGTA-220ENST00000560998 CLTCQ00610 1675 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-220ENST00000560998 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-220ENST00000560998 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
RABGGTA-220ENST00000560998 PTPRMP28827 1452 aa18.02■□□□□ 0.48
RABGGTA-220ENST00000560998 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
RABGGTA-220ENST00000560998 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.48
RABGGTA-220ENST00000560998 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.47
RABGGTA-220ENST00000560998 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
RABGGTA-220ENST00000560998 ARHGEF40Q8TER5 1519 aa18.01■□□□□ 0.47
RABGGTA-220ENST00000560998 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
RABGGTA-220ENST00000560998 SHPRHQ149N8 1683 aa18.01■□□□□ 0.47
RABGGTA-220ENST00000560998 GOLGA2Q08379 1002 aa18■□□□□ 0.47
RABGGTA-220ENST00000560998 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
RABGGTA-220ENST00000560998 STK26Q9P289 416 aa18■□□□□ 0.47
RABGGTA-220ENST00000560998 CGNL1Q0VF96 1302 aa18■□□□□ 0.47
RABGGTA-220ENST00000560998 L1TD1Q5T7N2 865 aaKnown RBP18■□□□□ 0.47
RABGGTA-220ENST00000560998 YTHDC2Q9H6S0 1430 aaKnown RBP18■□□□□ 0.47
RABGGTA-220ENST00000560998 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
RABGGTA-220ENST00000560998 APAF1O14727 1248 aa17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 FAM161AQ3B820 660 aa17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 NSD2O96028 1365 aa17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 NINLQ9Y2I6 1382 aa17.98■□□□□ 0.47
RABGGTA-220ENST00000560998 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
RABGGTA-220ENST00000560998 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
RABGGTA-220ENST00000560998 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
RABGGTA-220ENST00000560998 PLIN1O60240 522 aa17.96■□□□□ 0.47
RABGGTA-220ENST00000560998 TRMT2AQ8IZ69 625 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-220ENST00000560998 NGEFQ8N5V2 710 aa17.96■□□□□ 0.47
RABGGTA-220ENST00000560998 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-220ENST00000560998 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-220ENST00000560998 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
RABGGTA-220ENST00000560998 TNNT2P45379 298 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-220ENST00000560998 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
RABGGTA-220ENST00000560998 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 MLECQ14165 292 aa17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 RRP9O43818 475 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 POGKQ9P215 609 aa17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 SETD1AO15047 1707 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-220ENST00000560998 ABCC11Q96J66 1382 aa17.92■□□□□ 0.46
RABGGTA-220ENST00000560998 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-220ENST00000560998 MTHFSP49914 203 aa17.91■□□□□ 0.46
RABGGTA-220ENST00000560998 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
RABGGTA-220ENST00000560998 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
RABGGTA-220ENST00000560998 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-220ENST00000560998 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 VIRMAQ69YN4 1812 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 NKTRP30414 1462 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 E9PSI1 815 aa17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
RABGGTA-220ENST00000560998 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
RABGGTA-220ENST00000560998 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-220ENST00000560998 ANKRD26Q9UPS8 1709 aa17.89■□□□□ 0.45
RABGGTA-220ENST00000560998 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
RABGGTA-220ENST00000560998 C20orf194Q5TEA3 1177 aa17.88■□□□□ 0.45
RABGGTA-220ENST00000560998 NRXN3Q9Y4C0 1643 aa17.87■□□□□ 0.45
RABGGTA-220ENST00000560998 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
RABGGTA-220ENST00000560998 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
RABGGTA-220ENST00000560998 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
RABGGTA-220ENST00000560998 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
RABGGTA-220ENST00000560998 MED14O60244 1454 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms