RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
MARK3-221ENST00000560603 SRCAPQ6ZRS2 3230 aa18.13■□□□□ 0.49
MARK3-221ENST00000560603 FNBP4Q8N3X1 1017 aaPredicted RBP18.12■□□□□ 0.49
MARK3-221ENST00000560603 ESCO1Q5FWF5 840 aa18.11■□□□□ 0.49
MARK3-221ENST00000560603 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
MARK3-221ENST00000560603 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.48
MARK3-221ENST00000560603 ATRNO75882 1429 aa18.07■□□□□ 0.48
MARK3-221ENST00000560603 PPLO60437 1756 aa18.07■□□□□ 0.48
MARK3-221ENST00000560603 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
MARK3-221ENST00000560603 FOXO3O43524 673 aa18.05■□□□□ 0.48
MARK3-221ENST00000560603 CCDC125Q86Z20 511 aa18.05■□□□□ 0.48
MARK3-221ENST00000560603 MYOM2P54296 1465 aa18.05■□□□□ 0.48
MARK3-221ENST00000560603 STK26Q9P289 416 aa18.04■□□□□ 0.48
MARK3-221ENST00000560603 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
MARK3-221ENST00000560603 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
MARK3-221ENST00000560603 EP400Q96L91 3159 aa18.03■□□□□ 0.48
MARK3-221ENST00000560603 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
MARK3-221ENST00000560603 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
MARK3-221ENST00000560603 PXDNQ92626 1479 aa18.02■□□□□ 0.48
MARK3-221ENST00000560603 RGL3Q3MIN7 710 aa18.02■□□□□ 0.48
MARK3-221ENST00000560603 TECPR2O15040 1411 aa18.01■□□□□ 0.47
MARK3-221ENST00000560603 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
MARK3-221ENST00000560603 WAPLQ7Z5K2 1190 aa18.01■□□□□ 0.47
MARK3-221ENST00000560603 GJD4Q96KN9 370 aaPredicted RBP18.01■□□□□ 0.47
MARK3-221ENST00000560603 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
MARK3-221ENST00000560603 NUTM2FA1L443 756 aa18■□□□□ 0.47
MARK3-221ENST00000560603 BCL9LQ86UU0 1499 aa18■□□□□ 0.47
MARK3-221ENST00000560603 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
MARK3-221ENST00000560603 UNC5CLQ8IV45 518 aa17.97■□□□□ 0.47
MARK3-221ENST00000560603 SPATA31A3Q5VYP0 1347 aa17.97■□□□□ 0.47
MARK3-221ENST00000560603 TMEM132EQ6IEE7 984 aa17.96■□□□□ 0.47
MARK3-221ENST00000560603 SPATA31E1Q6ZUB1 1445 aa17.96■□□□□ 0.47
MARK3-221ENST00000560603 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
MARK3-221ENST00000560603 PSME1Q06323 249 aa17.95■□□□□ 0.46
MARK3-221ENST00000560603 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
MARK3-221ENST00000560603 MPHOSPH9Q99550 1183 aa17.95■□□□□ 0.46
MARK3-221ENST00000560603 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
MARK3-221ENST00000560603 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
MARK3-221ENST00000560603 KRT28Q7Z3Y7 464 aa17.94■□□□□ 0.46
MARK3-221ENST00000560603 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
MARK3-221ENST00000560603 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
MARK3-221ENST00000560603 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
MARK3-221ENST00000560603 PLEKHH1Q9ULM0 1364 aa17.93■□□□□ 0.46
MARK3-221ENST00000560603 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.93■□□□□ 0.46
MARK3-221ENST00000560603 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
MARK3-221ENST00000560603 SLIT2O94813 1529 aa17.92■□□□□ 0.46
MARK3-221ENST00000560603 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
MARK3-221ENST00000560603 RALGAPBQ86X10 1494 aa17.91■□□□□ 0.46
MARK3-221ENST00000560603 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
MARK3-221ENST00000560603 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
MARK3-221ENST00000560603 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
MARK3-221ENST00000560603 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
MARK3-221ENST00000560603 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
MARK3-221ENST00000560603 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.45
MARK3-221ENST00000560603 USP32Q8NFA0 1604 aa17.88■□□□□ 0.45
MARK3-221ENST00000560603 VPS72Q15906 364 aa17.87■□□□□ 0.45
MARK3-221ENST00000560603 LMOD2Q6P5Q4 547 aa17.87■□□□□ 0.45
MARK3-221ENST00000560603 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
MARK3-221ENST00000560603 SBNO1A3KN83 1393 aa17.87■□□□□ 0.45
MARK3-221ENST00000560603 ARHGEF10O15013 1369 aa17.87■□□□□ 0.45
MARK3-221ENST00000560603 GLI3P10071 1580 aa17.87■□□□□ 0.45
MARK3-221ENST00000560603 SEPT12Q8IYM1 358 aa17.86■□□□□ 0.45
MARK3-221ENST00000560603 POGKQ9P215 609 aa17.85■□□□□ 0.45
MARK3-221ENST00000560603 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
MARK3-221ENST00000560603 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
MARK3-221ENST00000560603 CABLES1Q8TDN4 633 aa17.84■□□□□ 0.45
MARK3-221ENST00000560603 PRAM1Q96QH2 718 aa17.84■□□□□ 0.45
MARK3-221ENST00000560603 PLEKHG5O94827 1062 aa17.83■□□□□ 0.44
MARK3-221ENST00000560603 SAFB2Q14151 953 aaKnown RBP eCLIP17.83■□□□□ 0.44
MARK3-221ENST00000560603 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
MARK3-221ENST00000560603 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
MARK3-221ENST00000560603 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
MARK3-221ENST00000560603 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
MARK3-221ENST00000560603 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
MARK3-221ENST00000560603 A0A0G2JS52 829 aa17.8■□□□□ 0.44
MARK3-221ENST00000560603 MYT1Q01538 1121 aa17.8■□□□□ 0.44
MARK3-221ENST00000560603 DEFB132Q7Z7B7 95 aa17.8■□□□□ 0.44
MARK3-221ENST00000560603 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
MARK3-221ENST00000560603 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
MARK3-221ENST00000560603 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
MARK3-221ENST00000560603 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
MARK3-221ENST00000560603 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
MARK3-221ENST00000560603 PLCH1Q4KWH8 1693 aa17.78■□□□□ 0.44
MARK3-221ENST00000560603 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
MARK3-221ENST00000560603 BAG6P46379 1132 aa17.77■□□□□ 0.44
MARK3-221ENST00000560603 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
MARK3-221ENST00000560603 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
MARK3-221ENST00000560603 FAM98CQ17RN3 349 aaKnown RBP17.74■□□□□ 0.43
MARK3-221ENST00000560603 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
MARK3-221ENST00000560603 TRAK1Q9UPV9 953 aa17.74■□□□□ 0.43
MARK3-221ENST00000560603 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
MARK3-221ENST00000560603 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
MARK3-221ENST00000560603 STAC3Q96MF2 364 aa17.72■□□□□ 0.43
MARK3-221ENST00000560603 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
MARK3-221ENST00000560603 WASLO00401 505 aaPredicted RBP17.7■□□□□ 0.42
MARK3-221ENST00000560603 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
MARK3-221ENST00000560603 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
MARK3-221ENST00000560603 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
MARK3-221ENST00000560603 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
MARK3-221ENST00000560603 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms