RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 CTC1Q2NKJ3 1217 aa7.78□□□□□ -1.16
AC066612.1-201ENST00000560339 TREML4Q6UXN2 200 aa7.77□□□□□ -1.17
AC066612.1-201ENST00000560339 GMPR2Q9P2T1 348 aaKnown RBP7.77□□□□□ -1.17
AC066612.1-201ENST00000560339 TRIM32Q13049 653 aa7.75□□□□□ -1.17
AC066612.1-201ENST00000560339 WNT7AO00755 349 aa7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 KDM4AO75164 1064 aa7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 CD46P15529 392 aa7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 HAP1P54257 671 aaPredicted RBP7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 SNIP1Q8TAD8 396 aaKnown RBP7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
AC066612.1-201ENST00000560339 SMCPP49901 116 aaPredicted RBP7.73□□□□□ -1.17
AC066612.1-201ENST00000560339 MMP16P51512 607 aa7.73□□□□□ -1.17
AC066612.1-201ENST00000560339 CCDC24Q8N4L8 307 aa7.73□□□□□ -1.17
AC066612.1-201ENST00000560339 TULP1O00294 542 aaPredicted RBP7.72□□□□□ -1.17
AC066612.1-201ENST00000560339 WFS1O76024 890 aa7.72□□□□□ -1.17
AC066612.1-201ENST00000560339 MAP2K5Q13163 448 aa7.72□□□□□ -1.17
AC066612.1-201ENST00000560339 MRGPRX2Q96LB1 330 aa7.72□□□□□ -1.17
AC066612.1-201ENST00000560339 SMPD1P17405 629 aa7.71□□□□□ -1.18
AC066612.1-201ENST00000560339 MDM2Q00987 491 aaPredicted RBP7.71□□□□□ -1.18
AC066612.1-201ENST00000560339 J3QL48 77 aa7.7□□□□□ -1.18
AC066612.1-201ENST00000560339 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
AC066612.1-201ENST00000560339 USP46P62068 366 aa7.7□□□□□ -1.18
AC066612.1-201ENST00000560339 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
AC066612.1-201ENST00000560339 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
AC066612.1-201ENST00000560339 IRF6O14896 467 aa7.69□□□□□ -1.18
AC066612.1-201ENST00000560339 HLA-CQ95604 372 aa7.69□□□□□ -1.18
AC066612.1-201ENST00000560339 ATP13A2Q9NQ11 1180 aa7.69□□□□□ -1.18
AC066612.1-201ENST00000560339 HOXA2O43364 376 aa7.67□□□□□ -1.18
AC066612.1-201ENST00000560339 RC3H1Q5TC82 1133 aaKnown RBP7.67□□□□□ -1.18
AC066612.1-201ENST00000560339 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
AC066612.1-201ENST00000560339 HPS1Q92902 700 aa7.66□□□□□ -1.18
AC066612.1-201ENST00000560339 MINK1Q8N4C8 1332 aaPredicted RBP7.66□□□□□ -1.18
AC066612.1-201ENST00000560339 SNRPBP14678 240 aaKnown RBP7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 WNT7BP56706 349 aa7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 GUCA2AQ02747 115 aa7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 NFX1Q12986 1120 aaKnown RBP7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
AC066612.1-201ENST00000560339 ALDH1A1P00352 501 aa7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 SKOR1P84550 965 aa7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 SYMPKQ92797 1274 aaKnown RBP7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 TRIM47Q96LD4 638 aa7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
AC066612.1-201ENST00000560339 JUNDP17535 347 aa7.63□□□□□ -1.19
AC066612.1-201ENST00000560339 CLCN1P35523 988 aa7.63□□□□□ -1.19
AC066612.1-201ENST00000560339 GPCPD1Q9NPB8 672 aa7.63□□□□□ -1.19
AC066612.1-201ENST00000560339 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
AC066612.1-201ENST00000560339 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
AC066612.1-201ENST00000560339 NUDT12Q9BQG2 462 aa7.62□□□□□ -1.19
AC066612.1-201ENST00000560339 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
AC066612.1-201ENST00000560339 RETREG3Q86VR2 466 aa7.61□□□□□ -1.19
AC066612.1-201ENST00000560339 EHBP1Q8NDI1 1231 aa7.61□□□□□ -1.19
AC066612.1-201ENST00000560339 FAM217BQ9NTX9 383 aaPredicted RBP7.61□□□□□ -1.19
AC066612.1-201ENST00000560339 C6orf229H3BNL8 230 aa7.6□□□□□ -1.19
AC066612.1-201ENST00000560339 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
AC066612.1-201ENST00000560339 WIPF1O43516 503 aa7.59□□□□□ -1.19
AC066612.1-201ENST00000560339 FDX1P10109 184 aa7.59□□□□□ -1.19
AC066612.1-201ENST00000560339 WASF2Q9Y6W5 498 aa7.59□□□□□ -1.19
AC066612.1-201ENST00000560339 PTCRAQ6ISU1 281 aaPredicted RBP7.58□□□□□ -1.2
AC066612.1-201ENST00000560339 MS4A1P11836 297 aa7.57□□□□□ -1.2
AC066612.1-201ENST00000560339 CAPN5O15484 640 aaPredicted RBP7.56□□□□□ -1.2
AC066612.1-201ENST00000560339 SLC16A10Q8TF71 515 aa7.56□□□□□ -1.2
AC066612.1-201ENST00000560339 CCNYL3P0C7X3 344 aa7.55□□□□□ -1.2
AC066612.1-201ENST00000560339 BMP1P13497 986 aa7.55□□□□□ -1.2
AC066612.1-201ENST00000560339 SIAH2O43255 324 aa7.54□□□□□ -1.2
AC066612.1-201ENST00000560339 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
AC066612.1-201ENST00000560339 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
AC066612.1-201ENST00000560339 SH3BP2P78314 561 aa7.53□□□□□ -1.2
AC066612.1-201ENST00000560339 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
AC066612.1-201ENST00000560339 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
AC066612.1-201ENST00000560339 VSIG10Q8N0Z9 540 aa7.53□□□□□ -1.2
AC066612.1-201ENST00000560339 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
AC066612.1-201ENST00000560339 TTLL12Q14166 644 aaPredicted RBP7.52□□□□□ -1.21
AC066612.1-201ENST00000560339 PTPRNQ16849 979 aa7.52□□□□□ -1.21
AC066612.1-201ENST00000560339 SPIRE2Q8WWL2 714 aa7.52□□□□□ -1.21
AC066612.1-201ENST00000560339 UNC93B1Q9H1C4 597 aa7.52□□□□□ -1.21
AC066612.1-201ENST00000560339 NDUFV2P19404 249 aa7.51□□□□□ -1.21
AC066612.1-201ENST00000560339 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
AC066612.1-201ENST00000560339 BAP1Q92560 729 aa7.51□□□□□ -1.21
AC066612.1-201ENST00000560339 EVA1BQ9NVM1 165 aa7.51□□□□□ -1.21
AC066612.1-201ENST00000560339 PLEKHG3A1L390 1219 aa7.5□□□□□ -1.21
AC066612.1-201ENST00000560339 MOXD2PA6NHM9 499 aa7.5□□□□□ -1.21
AC066612.1-201ENST00000560339 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
AC066612.1-201ENST00000560339 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
AC066612.1-201ENST00000560339 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
AC066612.1-201ENST00000560339 KCNH2Q12809 1159 aa7.49□□□□□ -1.21
AC066612.1-201ENST00000560339 MTMR2Q13614 643 aa7.49□□□□□ -1.21
AC066612.1-201ENST00000560339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.49□□□□□ -1.21
AC066612.1-201ENST00000560339 IRF7Q92985 503 aa7.49□□□□□ -1.21
AC066612.1-201ENST00000560339 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
AC066612.1-201ENST00000560339 VARSP26640 1264 aaKnown RBP7.48□□□□□ -1.21
AC066612.1-201ENST00000560339 VEGFBP49765 207 aa7.48□□□□□ -1.21
AC066612.1-201ENST00000560339 CTHP32929 405 aa7.47□□□□□ -1.21
AC066612.1-201ENST00000560339 GMPRP36959 345 aa7.47□□□□□ -1.21
AC066612.1-201ENST00000560339 ZNF511Q8NB15 262 aa7.47□□□□□ -1.21
AC066612.1-201ENST00000560339 ZFP42Q96MM3 310 aa7.47□□□□□ -1.21
AC066612.1-201ENST00000560339 NNTQ13423 1086 aa7.46□□□□□ -1.22
AC066612.1-201ENST00000560339 GIGYF2Q6Y7W6 1299 aaKnown RBP7.46□□□□□ -1.22
AC066612.1-201ENST00000560339 NPAS3Q8IXF0 933 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms